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LotjaGi4g1v0145400.3

Overview

Field Value
Gene ID LotjaGi4g1v0145400
Transcript ID LotjaGi4g1v0145400.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Kinase-like protein; TAIR: AT4G19110.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6Z8C8|CDKF4_ORYSJ Cyclin-dependent kinase F-4; TrEMBL-Plants: tr|A0A0B0NZR3|A0A0B0NZR3_GOSAR Cyclin-dependent kinase F-4; Found in the gene: LotjaGi4g1v0145400
Working Lj name n.a.

We have encountered a general error: No InterPro domain data available

Sequence information

Genomic sequence (LjG1.1_chr4:23456599..23457618) extracted from Lotus japonicus Gifu genome v1.2.

ATGAATCACCCAAACGTTGTGAAGCTTAAAGAAGTTATTCGAGAATGTGACATTCTGTACCTTGTTTTTGAGTACATGGT AAGTGGCTAGGTTTTATAGCATAATGGTAGCTGATGTGGATACTAACCTTTTTAAGTCTATTTGGGGTGATCTAGGACTG CAACCTTTACCAACTTATGAAAAAGAGGGAGAAACTATTTTCTGAAGATGAAGTTAGAAATTGGTGTTTTCAAGTTTTCC AAGGCCTTGCTTACATGCACCAGCGTGGATACTTTCATCGTGATCTTAAGCCTGGTACTTATTCATATCTTTGGTACACT CTTGAGTCTTGATAAAGTGGCAATAAGAGTTGATTTATAATTTATGTTATATGGCCTAGAAGGTGTATAATATTAGCATT TTTTTCTCATCACTAACTCTCCCTTTCTATTTTCTATTTTGTTTTTAATATAATTTTAGTTTGCTGATTGATTGAATTGC ATATCATGAGAAAAATGCATATAGGTGCCTGGTTTGATCTATTACTCTGCTACTAAGTTTTGCTGCATTGATACAAGGTG TGCTACTTTTGTAGAAAACTTGCTGGTAACCAAGGATATCATCAAAGTTTCTGATTTCGGCCTAGCCCGAGAGATCAGTT CACACCCACCTTATACTGAATATGTATCCACTCGGTGGTATGTATCTTGAACTTGAATACACTATTATAGATGCATAAGA CACTGTGTTTGTCTTTTAATAACATGTACAATGGCCTCTGATTAGGTATCGTGCTCCTGAAGTCCTGCTGCAGTCTTACC TGTATAGCTCTAAAGTTGGTAAGCACCTGATATAGATTAAATTGTAATGATGTCATAAGCAAGAAACTGGTACTGACTCA TGCATTACTTGGAGACTTGTAGTGATGATGGTGAGTACCATGCTAACATTTAGTTTTTCATTTTTCTTCCAGACATGTGG GCAATGGGTGCTATTATGGCTGAGTTGTTCACTCTCCGTCCTCTATTTCCTGGTACCAGG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0145400.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAATCACCCAAACGTTGTGAAGCTTAAAGAAGTTATTCGAGAATGTGACATTCTGTACCTTGTTTTTGAGTACATGGA CTGCAACCTTTACCAACTTATGAAAAAGAGGGAGAAACTATTTTCTGAAGATGAAGTTAGAAATTGGTGTTTTCAAGTTT TCCAAGGCCTTGCTTACATGCACCAGCGTGGATACTTTCATCGTGATCTTAAGCCTGGTGTGCTACTTTTGTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0145400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNHPNVVKLKEVIRECDILYLVFEYMDCNLYQLMKKREKLFSEDEVRNWCFQVFQGLAYMHQRGYFHRDLKPGVLLL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Unable to find any records for the transcript with the identifer LotjaGi4g1v0145400.3.

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0145400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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