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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0275700 |
| Transcript ID | LotjaGi4g1v0275700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BSD domain protein; TAIR: AT2G10950.1 BSD domain-containing protein; Swiss-Prot: sp|Q0HM63|E4PD_SHESM D-erythrose-4-phosphate dehydrogenase; TrEMBL-Plants: tr|K7M043|K7M043_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0275700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:64607154..64611594) extracted from Lotus japonicus Gifu genome v1.2.
TTTAAATTCTCGGATGAAGATGAAAATAGAAAATTAAGCTTAAGGTTCTGTGCTTTATCTCTTTCATACAAAGTTTCCAT GTTCTCTTCGCCGCCGGCGCCGTCGCCCTCCGCCGACGACCGCCACGGCGTTAAGGACGACGTATCGCTTATTTTCCGCG GCGTCGCTAACTTCCTCGCTCCGCCGCCCTCTTCTTCTTCTTCTTCCGCCGGCGACTCCTCTTCTTCGAAAACTCTCGTC GGAATCCGCAACGATCTCGTTGAGATCGGTGGAAGCTTCAGAAGCTCGTTCTCCCTTCTCTCGTCGAACAAAGCCGTCAC CGGAATATCCAAGTTCGCTTCTCAATTGTTGAAGTCGGTGCCTGATCAACAACGAGTTGATGGTGGCGCGGTGCCTGGGA CGACGGAAGATGTTGTTCGCTTCGTGAAGGAAATTTCCACGTGGCCGGAGTGTTGGACTGAATTCCCCTTGCCACTCCAT AATGGTACTTCTTCTTCTTCTTCTTCTTCAACTTTCCATTGATAAATAATATTATATATTTTTTATTATGATTAGTTCAT TACTATATTATTATTTGTTTGATTGTTTCTGATTATGATTCACTCTTTGTTCAGTTGAATGTATGTAATATGATTATGGT AGAGTTAGTATTTCTGATTATGTCTTTGAATTCAGTACATGACATGTCATTATGGTCTCATGTGATCCATAAAGTCAATT TCAGTTGAGAAAATCTTGGTTGCTAGTGTAGTTTGTTCATAAGTGAATTGTTAATTGCTATAGTTTATGGTTGTATGTAT TTCAATAGCAAATATGAACCCTTACTATATTGAATTGAGTATAGGAGAAAGGGATTGTAATTGTTACATATCTAATCTCA TGTACATGTTCTTCTTGGTCAAAGCTATATTTTAGAAATGTATACCAAACGTATTGTGCTTTTTGAATGGTGAATGCTAG TGGCATGCTTCAGTGATAGCTTAGTTTGTATATCAAATCCTATTGTTGAATAATGTCAGACAATAAGGGTAGGCTTGGTG AGATAAAGCAATGTCAACAAAAAGGGCTTGGGTTCAGTTCGTTTTGGGTCTTGGGTGCAGCCCTTTGCGGTCCAGTTTTT GTTAACATGGTCGAAGAAAGGAAGGTCCTTTTCTTGGGTTGGTTAGTTAACCAGGGCTGTTAAACTTCTATGCTTGGTAT GGTAATTATAGTATCCATGAGATAACGCATGCTTACTCAAAGGCTATCTATGAATAAATTAGATGTTGATTCAAGTAAGT TCTATGGAGGTAACTTTAGTGTTTCCTTTTCTTTTTGAAATTCCATTCATTATACTTGACTATAGATCTATTTGGTATAG GGTCCAAGAGAAGCCTCATGTTTGTAAGGTTTATTCTAGGAAGAAGAAGTCCTTGGGGCGCGGAGATGAGGAGAATGAAG CGCTGGCTGCGATGACAGGTGCGCTTGAGGCGCATGGAACCCAGGTTGGGCCAAATCCTAACCTTGTGAGAGTGCTCTTA TTTATATTAGTCTAACCCTACCAGCCAAATAACACTGACTCTAAAGAGGCCCAACTCAAATGATAAAAATAGACTCAGCC AAGCATGCTTAAACTAACAGAGATAGATAAAACCAAACCCAAGCCCAAACTCAGATAGGCCCAGTCGCCCCAGGCACACT GGTCATTGCAGCCAGCGCTGCATTCTCCTCATTTCTGCCTGCCAAGGACCTCTTCTTCCTAGAACAAACCTCGTGAATAG GAGGCTTCTCTTGGATCCTAACAATTTTTTTTTAGTTGATAAGCTCAAGCGGATAATATGCAAGGCTCTAACAATTTTTG GCGAGAATGGAAGCTTCATCTCACTTATTATCACAGATATCTTGGAAAGTTCTAGTTTTTTCTTGTCTAGTATTTTCTAT TTTGTGTGGTACAGTCCTGTTTACCTCAATGCTGTTGCTGTCATTTATCAGAATGCAATTTAATTTAGCAATTATTTGAC ATCTGAGTTCCACGCCTTTTTGACTTTCAAGTTCCAAAACTATATTCTTGGGAATTAACCTTTAGAATTCTGTTGGGAGA AATTTCCATTAACAACTGCTGCAATGCTCCTTTAGCAACGCTGATTTAAAATAACTTATTCATGTTGTGAAGCTAGTTCA CTCTCCCGATCAATATAAAGTCCGAGTGCTCGTGTTCTTCTCAGCATACTTCTGGTTTAACTCTGATGTAAATGTTATTT GAATTAAAGTGGTTTTGAAATTTGATTCTACATACAGACTTTGTACAATAAACCATAAAAAGCTCTCAATTTTTCATTAT TTTGATCCTGCTTGACTGTATAACGAGATTGGCAGTCATTAATACTGAAATTTGAATTATTTCAGCAGATTTCAGCCTGT CCTATTCTCAGAGAGAACATGTCTTAGCTATAGAACGGCTGGTGCCTGAATTGGTGACACTTAGACTGAACCTTTGCAGT TACATGAATGTGGAGAAATTTTGGATGATCTATTTCTTGTTAGTACTTCCAAGACTTAATCAGCATGACTTTGAGCTCCT ATCTTCTCCAAAGGTAACCAATGCTTATTGCTTACTTTTCTTCAGTGTCAACATGTTTGGGTGACAATATTCTCTCAGTA TCTGCTATATCATGTGTATGCTTTTCCTTTTTTCTTTTGTTAGATTGTTGAATCAAGATGTACTCTTCTCCTAAAACTCA GAGAGAGGAAAGATTTGCAGGATGGAGAATGTGAAAAAGCAAGTACTGTGGATAAATTTCAAGAAGGGAGGGAGGACAGT GGAAGAGAGAGTATCTCATTTGAGCAAAATCAGGTTTTGGTTGAGGTTACAAATGCAATAAAGAGTTTAGAAATAGATGA CATGACCAATAGTGAAAGATGGTTGGAAGTTACAGATATTGATGCTACTTCATTGACTTCCTTTACGAAACTTCAACTAG AAGAGGATGTCTCATTCAGTGACCTAGATGATGATGGAAGTCGTAGCTCTGATAAACTATCAGGCCATAGGGAGGCACAG GACATCAGGGGTTCATCATCTGAAGGTTCTAGTGACTGGGTTCAGCTGCATAAAAGTACTGAGAGAGGTAGCTCAAAGAA GGCTATCTCTTTAAAAGGTAAGGATTCTGAAGATGAGTCAAATGATTGGCTTAAAGTTGATGATTGGCTTACATTTGATG AGCTTAGTTAGATAGGTTTTTCTCTATTTATAAAGAAGATATCTTGCTAAATCTCATTGAAATTCCCTGTACAAATACAT TACTTTATAGAAATAATTCATTCATATATGCAAAAGATTTGAAGTTAAAATATGATCTTTTGTCGCCTTCTCCATCGAGC TCAGCCACGAACCATTGCAGCATCTTGCATTGCCGTGAGGCCCTGCCGTTTCCCTTCATCTCCGATCCCTGGTTGTTTCT CTCCCTCTCTGTTTTTGCGTTGATTGAAGCGGTGCCTCTCCTTTGTTAAACGGGTCTCTTGATTGTGATTACTGATTAGG TTTTCTTTTGATGAATGATTACTGATTGGGTTTAAAAGTTGTGTTATCATGTGTGTGCATAGGGCCTGACCCTTTCTTTA GTACCAAAAATGAGAAGAACTGATGGAAAAAGCTGGCTTCACAACCCAACGCTAGTTTTTTTAAAGGATGCTCTGTCCTC TCTTTTTTCAGTGTTTCTTTAGCAAAAAAAAAACTTGTTGTATTCCAAAAATATATCCTCTCATTAAAATCCCCAAAAAA AACATTTTAATTTCAATGCAAAAATTCCTCAAAAAAGAGAGCTTAAAGAACATATAAAAATATAGGAGGGTAGAAGAAGG GTTGAGTTTGGAAGGTCTGGATTGGTGGTTGAAGGTTGGTCTGGGTGGTTCCGAGGAGGCTGTGTGGCAGTGCATTTCAA TGATATCAAGTTTGCGAAGGTTGGCGCTGAAGCGAAGAGCCTGACGTTGACTATTTGGGTGAGGGGCTGGTTTGGGTTGG GTTTGTTTTATTGGCGATTGTTTTTCTGGGTTTCTAGGTGTGGAGGTTTCGAATTCCGATTGATTTTCTGGCTTTGCTGG TTGAAGGGGGAGTGAGGGGGTAGAAGGGTGTAGGTCATGTAACAAAGTATTCTTTCAGTTGGGTAGTCATCCACCACAAT GCAAAGTAATTTTCTAAAACATGTGGAAGCCTAGGATGGTTACATTTGACAAATGATTGCATTCATTCCAATACATTATA TTCATTCCTTTATGGTTGACCCAATACACTGTACTCTTAAGAACAAAATGACCTGGTCAAAGAGTAGTGCAAAAATAATT CACACTTAGCCTTGTGAGCTTATCTCCAGCAAGAAGCCAACAAGGGACCATGGCAGATAAAAGCGAGCATAATGTAAATT ACGATCACAAAAATTAAGATAAGTGCAACCCTGCAGGAAAA
CDS sequence (LotjaGi4g1v0275700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCTCTTCGCCGCCGGCGCCGTCGCCCTCCGCCGACGACCGCCACGGCGTTAAGGACGACGTATCGCTTATTTTCCG CGGCGTCGCTAACTTCCTCGCTCCGCCGCCCTCTTCTTCTTCTTCTTCCGCCGGCGACTCCTCTTCTTCGAAAACTCTCG TCGGAATCCGCAACGATCTCGTTGAGATCGGTGGAAGCTTCAGAAGCTCGTTCTCCCTTCTCTCGTCGAACAAAGCCGTC ACCGGAATATCCAAGTTCGCTTCTCAATTGTTGAAGTCGGTGCCTGATCAACAACGAGTTGATGGTGGCGCGGTGCCTGG GACGACGGAAGATGTTGTTCGCTTCGTGAAGGAAATTTCCACGTGGCCGGAGTGTTGGACTGAATTCCCCTTGCCACTCC ATAATGCAGATTTCAGCCTGTCCTATTCTCAGAGAGAACATGTCTTAGCTATAGAACGGCTGGTGCCTGAATTGGTGACA CTTAGACTGAACCTTTGCAGTTACATGAATGTGGAGAAATTTTGGATGATCTATTTCTTGTTAGTACTTCCAAGACTTAA TCAGCATGACTTTGAGCTCCTATCTTCTCCAAAGATTGTTGAATCAAGATGTACTCTTCTCCTAAAACTCAGAGAGAGGA AAGATTTGCAGGATGGAGAATGTGAAAAAGCAAGTACTGTGGATAAATTTCAAGAAGGGAGGGAGGACAGTGGAAGAGAG AGTATCTCATTTGAGCAAAATCAGGTTTTGGTTGAGGTTACAAATGCAATAAAGAGTTTAGAAATAGATGACATGACCAA TAGTGAAAGATGGTTGGAAGTTACAGATATTGATGCTACTTCATTGACTTCCTTTACGAAACTTCAACTAGAAGAGGATG TCTCATTCAGTGACCTAGATGATGATGGAAGTCGTAGCTCTGATAAACTATCAGGCCATAGGGAGGCACAGGACATCAGG GGTTCATCATCTGAAGGTTCTAGTGACTGGGTTCAGCTGCATAAAAGTACTGAGAGAGGTAGCTCAAAGAAGGCTATCTC TTTAAAAGGTAAGGATTCTGAAGATGAGTCAAATGATTGGCTTAAAGTTGATGATTGGCTTACATTTGATGAGCTTAGTT AG
Protein sequence (LotjaGi4g1v0275700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFSSPPAPSPSADDRHGVKDDVSLIFRGVANFLAPPPSSSSSSAGDSSSSKTLVGIRNDLVEIGGSFRSSFSLLSSNKAV TGISKFASQLLKSVPDQQRVDGGAVPGTTEDVVRFVKEISTWPECWTEFPLPLHNADFSLSYSQREHVLAIERLVPELVT LRLNLCSYMNVEKFWMIYFLLVLPRLNQHDFELLSSPKIVESRCTLLLKLRERKDLQDGECEKASTVDKFQEGREDSGRE SISFEQNQVLVEVTNAIKSLEIDDMTNSERWLEVTDIDATSLTSFTKLQLEEDVSFSDLDDDGSRSSDKLSGHREAQDIR GSSSEGSSDWVQLHKSTERGSSKKAISLKGKDSEDESNDWLKVDDWLTFDELS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 364 | 356 | 5.6E-124 | – | |
| PANTHER | 9 | 364 | 356 | 5.6E-124 | – | |
| SUPERFAMILY | 108 | 190 | 83 | 2.38E-12 | – | |
| SMART | 135 | 186 | 52 | 3.6E-6 | ||
| Pfam | 136 | 187 | 52 | 7.5E-6 | ||
| MobiDBLite | 297 | 357 | 61 | - | – | |
| MobiDBLite | 299 | 320 | 22 | - | – | |
| MobiDBLite | 321 | 335 | 15 | - | – | |
| MobiDBLite | 336 | 357 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0275700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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