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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0303200 |
Transcript ID | LotjaGi4g1v0303200.6 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | A-kinase anchor protein 9, putative isoform 1; TAIR: AT5G57340.1 ras guanine nucleotide exchange factor Q-like protein; Swiss-Prot: sp|P06105|SC160_YEAST Protein SCP160; TrEMBL-Plants: tr|I1LVP2|I1LVP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0303200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67845039..67848121) extracted from Lotus japonicus Gifu genome v1.2.
TATGAGACACATTGCTACTCCAGCTTTTCTCTTGCCTCCTTCCCTCACAGCCTGTCAAGCCTGAATTATTAACTAACCCC TTGATTATAGTTTTAAATTTGAGCTGTTTCCTTTGTTGTTTCCTAGTAAAGGGTTGATTAATGTTTCTTACCTGTCAAGA GATTTGGTGCTGTCTATGAGCTTTCTCCAGATTCCCCAGGTGGTACTGCACTGTTTGGATTGATCCATCCTCTGTCTTGG AAATGATTCAAGGAGAATCATGAGAGCATTGTTCTCTTTTAATATTAGTATTGGTCCAATGAGTAAGGCTGACTCATGCA TAGATGCTGGCATGAAGGAGTGTTCAATGTCCCTCATAAGAGAAAGCAGAAATTTGGGTACTTCTTATCACAGGTATTAG AGCTACATCTCACAGATATCTTTATTCTTTCCTTTAACTTGAATTCGGTGTCAAATCCTAATGAAAACAGTTTTTCCTTT TCTTTCTTTCTTTGTTGCTGAGTCTCCAAATATGTCTGTGTGAAGAAGGTGTTGCCGTTCTAAGATGTAATACTCCTAAA GCATTTCATATGCCATTTTTTTTTGTAGTTTTAGATCAAGTATGGGTGCAGGCAAAAAATTCACTTATCGAAGCTTATCT ACTAAACAAAGCATTGGATAAGCTTCAATAAGTGCCTTTTGTTGGTCTACATCCAAACAAGCTCTTAATTCTCATGGAAG TGATACCAAATATCAATTATCTATCCATGGTGAAACAAAAAATTTCAAGAATAACATAATAGAAAGCAAGGTGACTTAAG AGCCTAGCTTTATAAGGAACAAGGAAAAGTGGGCACTTTTCTGAGGCCAGTGTGTAAGAAGTTGTAGGAGTAGGAGATGA TGACCACTGTTAAGGTCCTCATGGCTAATGCCTCCATAATGCTTCTGTCATCATACAATCTCAGACCCACATTTTAATTA GTTGGTTCCAACTTGCCTAAATCTATATTTTATGTTACATGCTGCTCCTATGTCTTTGATTGCACATTTGAAAATTTCAA TGCAAATTCTACTTGTCACCCCTCTCTCCACTTTTTGTTCCTAAAGTGAAACAAGCTAGAAACTTTCCTATATATTGCCT GCATCCAGGCCCCAAAAAGGGCAGAGACAGAATCTTGCAGGATAATGCCAGCTTATTATCATGATTCTGATCCTGTTCAA TCTTCATTTCAGTCTCTTGCCATGAAACTGAATGTGGTATCAGGTATATATGGTTAATCTACCAGTTAGCTAGGGTCTCA ACAATAGGTAAAGCCTGAGTTTCCAGTTTCTGTTAATCTTTTATGTTTTTGGTCAAACTTAAATTTGTCTTCACCTTCAC ACTGTAGCTTGAGAGGTCATAAGTACTCCATCAATTAGCATTAAAAAAAATTACGAACATGCTTTTTCTTTTACTCTTAC AGAATGTAGAAGTTGGTTGTATGATGATAGCAAGAGAAAAAATAAAAAAAATTCATTTTCTTTTTAGGAATGGTAACCAA AACTGAATATTCCATAAATCTTCTAGCAAATAACTTAGCTGGGGTGGAGTGGATGCCTGGGAGCATTATCAGAGCAAAGG ACAGCTAACCTATCACTGTCACAGGACTGCAACAACGACAACAAGAACAAAAGCCTCATCCCCCTAAGTGAGGTCGGCTA TATGGATCACACGACGCCCTTGCGCTCGATCAAAATCCAAATTTTGTCACAGGATTGGAATCAATAAATTGCAAGGTCCC ATGGATGAGAGAAACAATATAGAATCCATCAAGAAGACAATGCAGAGGCATGAGGACATCTTTAAACACCAGGTATCCTC AAGATGTGGTATGATACTATGATTGAACTTCCCATCTTAGCAAATACAAAATTCAGGTTACCATTCAATTTGTTTCTCAC ATGTTACATTACATGAAAACAATAATCACAGGGTCAAGCAGGTGCCCTATTAGGCTTTTATCAGCTTTAAGTTCATGAGT ATTATAAGGAGAGGCTTTCCATTGCCGTTATCTTTGATTCTCTTTGGAGGCCACACTATGCTTCATTCTGCATGTAAAGT GAAAATGGAACCATAATGCTTTCATAATGAACATACTGATTCAGAACTTTATAAAGTTACTCATTCTTTGACATCATATA TGTGGCCATGTTTATATCATTCTATGACTATGACCTTTATAAATTATTTGTTAACAAGTCCAAGCAGTCACACATGTGAA ACATCAGTCCCAATCCTGTGTTAAGAAGCATTATGATCTGCAATCTTTAACTGGTTAGCAATTATGAGAATATGGACTTT GCAGGTAAGAGAACTACACAGGGTATACAGTGTGCAAAAGATGCTGATGGATGAGCTCAAAGGAGAAATTAGACAACAGA GAATTTGGAACCCCATGAGTGTCATAAATGTTAGCCATCCTCATTCAATTGAACACCAACATCAAACAACACAATTTTCT TTCCATGTTCATAGATTGAGAGAGGATCTAGGCTCAAGAGAAAGGAGTGGAAGTGACTCTGGAGAGACCAACAAAATGGA AAGAGGTTTTGATTTGGAAAAGCCTGCTGAAGAAGATAATTTTACTGGAGTTTGTGGTTTTGAAGAAGGTGATGCAGGAC CTAGCTCTCATAATGCATTTCAGAGTAGTAAAATAAGTGCTTGTGGCTCAGATGAAGATATGGAAGTGGATTTGACACTA AGCATAGGAGGAAGCATGGTTAAGAACTCTCATCTTTCTCAATTAGACTCACCAAATGGGAAAACTAGAGAGCTAAATTC AAGTGCCTCCTTCAAATCAGACCTTAGATCAGATAGAGTAGGAGAATGCAGTGACACAACCACCCCCATTAGTAGCTCCA ATGTGAAATTGACTCAGGAAAAGAAAGGGGAACATTGGCTTTCAAAAGGTCTACAGCTTAAATAACATTTTAACTTGTTT GTTTGTAATTGTATCCTTTCATCTATACATTGACCACAGAATTTTGATGGGTCATGTATTCACATTCCTAGATTAATTTC CACTTTATTCCAATAAATGAAATAGTTTATACACTCTTCTGGG
CDS sequence (LotjaGi4g1v0303200.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGAGAGAAACAATATAGAATCCATCAAGAAGACAATGCAGAGGCATGAGGACATCTTTAAACACCAGGTAAGAGA ACTACACAGGGTATACAGTGTGCAAAAGATGCTGATGGATGAGCTCAAAGGAGAAATTAGACAACAGAGAATTTGGAACC CCATGAGTGTCATAAATGTTAGCCATCCTCATTCAATTGAACACCAACATCAAACAACACAATTTTCTTTCCATGTTCAT AGATTGAGAGAGGATCTAGGCTCAAGAGAAAGGAGTGGAAGTGACTCTGGAGAGACCAACAAAATGGAAAGAGGTTTTGA TTTGGAAAAGCCTGCTGAAGAAGATAATTTTACTGGAGTTTGTGGTTTTGAAGAAGGTGATGCAGGACCTAGCTCTCATA ATGCATTTCAGAGTAGTAAAATAAGTGCTTGTGGCTCAGATGAAGATATGGAAGTGGATTTGACACTAAGCATAGGAGGA AGCATGGTTAAGAACTCTCATCTTTCTCAATTAGACTCACCAAATGGGAAAACTAGAGAGCTAAATTCAAGTGCCTCCTT CAAATCAGACCTTAGATCAGATAGAGTAGGAGAATGCAGTGACACAACCACCCCCATTAGTAGCTCCAATGTGAAATTGA CTCAGGAAAAGAAAGGGGAACATTGGCTTTCAAAAGGTCTACAGCTTAAATAA
Protein sequence (LotjaGi4g1v0303200.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDERNNIESIKKTMQRHEDIFKHQVRELHRVYSVQKMLMDELKGEIRQQRIWNPMSVINVSHPHSIEHQHQTTQFSFHVH RLREDLGSRERSGSDSGETNKMERGFDLEKPAEEDNFTGVCGFEEGDAGPSSHNAFQSSKISACGSDEDMEVDLTLSIGG SMVKNSHLSQLDSPNGKTRELNSSASFKSDLRSDRVGECSDTTTPISSSNVKLTQEKKGEHWLSKGLQLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 2 | 229 | 228 | 7.4E-84 | – | |
PANTHER | 2 | 229 | 228 | 7.4E-84 | – | |
MobiDBLite | 85 | 110 | 26 | - | – | |
MobiDBLite | 167 | 230 | 64 | - | – | |
MobiDBLite | 167 | 190 | 24 | - | – | |
MobiDBLite | 198 | 213 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0303200.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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