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LotjaGi4g1v0320300.1

Overview

Field Value
Gene ID LotjaGi4g1v0320300
Transcript ID LotjaGi4g1v0320300.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Sucrose synthase; TAIR: AT3G43190.1 sucrose synthase 4; Swiss-Prot: sp|P13708|SUSY_SOYBN Sucrose synthase; TrEMBL-Plants: tr|A0A0R0GW94|A0A0R0GW94_SOYBN Sucrose synthase; Found in the gene: LotjaGi4g1v0320300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:69795348..69801178) extracted from Lotus japonicus Gifu genome v1.2.

CTTTACCCTGTTACCCATATAATAAGATTATTTTACTTTTCTTGTCTGTGAATTCCCAAGCTCCTTGCCTATAAATTGAC TCAGGCACCACCTCAGTTTCCATTCATTCATCCCTTCTCTTCGTACATCCCCTCTCTATTTTGCGTTTACTCTGTTTTCG TAAGTGTTGTTTCTTTTTTTTATTTTCTCTTCTCTTTCTTACTCTGTCTCTGTTCTGTTCTTCCCCTGTTTCGGTGCTCT GTTTTCCCCTGCCATGTCAGAATGATCTACCTCTGCTTGTTCATTCTTTCATGGCCCCTAGATCAGAATCCATGCTGTGA TCTAGGGTCTCTGATTCTCTTCTCTCTTCTTACATGAAATGGGGGTGGTTTTCTTAGTCTAGCTCTGTTTCCATGTTGAA TTTTTACTTCATTTTACTTGGAATGCTCTGTTCTTCAGACACCATTTGGTTTCTGGAACAAGGTTCTGTAGGTTGGGTGA TTTTTTTGCCAACCCTTTTGCTGGTTATGAGAATTTCACACCAAAATGCATGGCTTTGGTTACTAAAAACAAAAATTAAT GAAACTTGTGCACAGCCTGGCCTTGAATGAAGAACTTGTTTGTTTCTTATGATTCAATGTTCTTTTTCTTTTTTCACGGA TCAACACTGTGCTTAGTTGAACTTGGGGGTTATGAGGTTGAAGCCAGGAACAGAATGTTGAATTTTTTTCTATTTTCAGA CAAAAGCACAAACATCATTATTTCTACAACCACTTTAGATAATGTGATTAATTTAAAAATAAAAGATGGGTACACTGCAA AAGGATAATATTCTCCCAGCACTGATTAAGGTTGAAATCTTAGTTGAACAAAGGTTGAAGATTTGATATTAATATTTTAA TGGACAGGTGGTTGGTGGTAGCAGGTTTTGAAAATCCAATACAGTTTTGTGGAATAATTTTAATCTTTCTTTATTTTGTT TTTCACTTGTTTGGGTTATTGACTCTTTGTGAATTGTTGATTAATCTTGTATTTTCTTGGTGGTCTATTTTGTGTGTTCT TGATCTGTTTCTTATGCTGCTTTTTCTTCTCAGATCATGGCCAATGGCCTGACCCGAGTTCACAGCCTCCGGGAGAGGCT TGATGAGACCCTTGCTACCAACAGGAATGAAATTTTGACCCTTCTGTCAAGGTAAATGTTCATCCTTTGATTTCATGGGT TTATGATCACAGTGGTTTATACTTTAACTAGAGGGTTTAAGCTCAAATTTTTATTTATTTATCTTTAAGCTACTTGGTGG AGTTAATCTTAATTGCATGTTTGGAAATCCTTCTAAAATTGATTATTCAGTCAGAATCAATTTTGGGGAGAAGCCTATAT GAGTAGCTTCTGGGTTTTAAAATTGATTTTGAGAAAATAGAAGCTGATCCAAACATGCTATGATTATGTGTTGAGGAAGC ATGCAACTCTAACAATGAAATGTTTTGGATTTTGATAGGATTGAAGCCAAGGGCAAGGGGATCCTGCAACATCACCAGAT CATTGCTGAGTTTGAGGAAATTCCTGAAGAGAACAGGCAGAAGCTAACTGATGGAGCTTTTGGAGAAGTTTTGAGATCCA CACAGGTAACTTGTTGTTTGATCAATCCATATGATGTTATAAACCACCTATGATTTGTGTTTTTTTGTTGATTTTCTGGT TTCAATGTTTTTCTAGGAAGCCATAGTTTTACCACCATGGGTTGCTCTTGCTGTTCGTCCAAGGCCTGGTGTTTGGGAGT ATCTGAGAGTGAATGTGCATGCTCTTGTTGTTGAAGAGCTGCAACCTGCTGAGTTTCTGCACTTCAAGGAGGAACTTGTT GATGGAAGGTAAGGTTTCATAGCCTTTAAGTTTTGTTTTTCAGTGTAATTTGTTATGTTACTCAAATGGTAAGAAGTTGT CTCAATCTTGTTGTAGTTCTAATGGCAACTTTGTGCTTGAGTTGGACTTTGAACCATTTAATGCATCGTTTCCTCGCCCA ACTCTGAACAAGTCAATTGGGAATGGTGTGGAATTCCTCAATCGCCACCTTTCTGCTAAACTCTTCCATGACAAGGAGAG CTTGCATCCACTTCTGGAATTTCTCAGACTTCACAACTACAATGGAAAGGTACCTGTTTCTCGTCCTTGATTGTAATTTT TTATGGTAGTGACATGTATGCATATGTATCATCCATATTTAGTGCATGTTTGGAAACTATTCTACAATTGATTCTAAAAC TGTGAGTAGCTTCTGCGTTTCAGAATTGATTCTGATGAAATAGATGTTGATCTAAACATGCTATTAGTAACATCTAATAG TACTTGCTTTGTAAGGCATATTCTTCAATGAATTTATGACCTGAATATCCACATCCATGTTTGAACCATGTCTAGTAACG AGATCTAGAATATAAATCCAATATTTCCAATCCTATCTTTATATTAAGATGATTTATTCATTCCTGTACATATGCTGTCT TGTGTGTGTTCGTTTTGAGTTTACTGACAAAGATTTCTTTGCATTTGCAGACTTTGATGTTGAATGACAGGATTCAGACC CCAAATGCTCTCCAACATGTTCTGAGGAAAGCTGAAGAGTACCTAGGCACACTTCCTCTTGAGACACCTTACTCAGAATT TGAGCACAAGTTCCAGGAAATTGGTTTGGAGAGAGGGTGGGGTGACACTGCTGAGCGTGTCCTTGAGTCCATTCAACTCC TTTTGGATCTTCTTGAGGCACCTGACCCGTGCACCCTCGAAACTTTCCTAGGAAGAATCCCTATGGTCTTTAATGTGGTG ATCCTTTCACCCCATGGTTACTTTGCTCAAGACAATGTCTTGGGTTACCCTGATACTGGTGGCCAGGTTGGTTTACATGA AATGCTTCAGGTGTACTATTTCTCATACTTATTTTCCTATCATGGTTAACTCACATGCTTTGCTTATTCTCTAATCCAGG TTGTTTACATCTTGGATCAAGTGCGTGCATTGGAGAGTGAGATGCTCCAACGCATTAAGCAACAAGGCTTGGATATTGTT CCTCGCATTCTCATTGTAAGTCCTGTCGCATGTTTAGAAATCTGTCTACAATTGATTCTAAAGCCAAAATTTAATTCTGA GGAGAAGCTTGCTTTGTCTATAATGTGTGTATATTTCTCTAATTGGTGCCTTTGGATGCTGTTAAATGCAGATCACTCGT CTTCTCCCTGACGCAGTGGGAACTACTTGTGGCCAACGTCTTGAGAAGGTGTATAACACCGAGCACTGCCACATTCTTCG AGTGCCCTTCAGAAATGAGAAGGGAATTGTCCGTAAATGGATCTCAAGATTCGAAGTCTGGCCCTACCTAGAAACTTATA CTGAGGTAAATGGTTAACCCAAGATTCTGATGCTGTTCTAGCATTTTGATGTTTTCATTTGAATTTGACCTTGATTTTAA TTATTTTTTGTCATTAGGATGTTGCTCATGAGCTTGCCAAAGAGTTGCAAGGGAAGCCTGATCTGATCGTTGGAAACTAC AGTGATGGAAACATCGTTGCCTCTTTGTTGGCACATAAATTGGGTGTCACTCAGGTAATACTTACTAGATCAGTTTTATG TTGTAACCTTTTGTTAACTATGTTTTGGAACTTTAAGGCCTAATGTTGTTTTCCCTTTGTTCATTGTAGTGTACCATTGC TCATGCACTTGAGAAGACCAAATACCCCGAATCCGACATCTACTGGAAGAAATTCGAAGAGAAGTATCACTTCTCATGCC AATTTACAGCTGATCTCTTTGCAATGAATCACACTGACTTCATCATCACCAGTACATTCCAAGAGATTGCTGGAAGGTGA ACTATCTCTTTATAATTCATACCATATTTTTTCCTTTTCACAATTTTCATGGATTGATTACTTACTTAAATTCTTGTATA CATACTTGTGCAGCAAGGATACTGTAGGACAGTATGAGAGCCACACTGCCTTCACCCTTCCAGGACTCTACCGAGTCGTC CACGGTATCGATGTCTTCGATCCAAAGTTCAACATTGTCTCACCCGGAGCTGATCAGACCATTTACTTCCCGTACACTGA AACTAGCCGTAGGTTGACATCCTTCCACCCTGAAATTGAAGAGCTTCTATACAGCTCAGTCGAGAACGAAGAACACATGT TAGTCTCTATTCTATCATTTCCTCGCCCCGTTTGTTATTTGTTTCCATGTAGAAAAATACTTGCGTGTTTAAAAACTCTA CTACAATTTGATTTTGAAGTCATAATCAATTCTGAAAAAGAAGCTAAGGTGAATTGAATAGCTTTTGAGTTTCAGAATTG ATTCTGATGAAAGAGAAGCTGTATATCTGAGTCTAATGTAATATCCACTGTGTCACAGATGTGTGTTGAAGGACCGAAGC AAGCCGATTATCTTCACCATGGCGAGGTTGGACCGTGTGAAGAACATTACAGGACTTGTTGAGTGGTATGGCAAGAATGC TAAGCTGAGGGAGCTGGTGAACCTTGTGGTTGTTGCTGGAGACAGGAGGAAGGAGTCAAAGGACTTGGAAGAGAAAGCTG AGATGAAGAAGATGTATAGCCTGATTGAGACCTACAAGCTAAATGGGCAATTCCGGTGGATTTCATCTCAGATGAACAGG GTCAGGAACGGAGAGCTGTACCGTGTCATTTGCGACACGAAGGGAGCGTTCGTGCAGCCTGCTGTGTATGAAGCTTTTGG TTTGACAGTGGTTGAGGCCATGACTTGTGGGTTGCCAACATTTGCTACCTGCAATGGTGGTCCTGCTGAGATCATTGTGC ATGGAAAATCTGGTTTCCACATTGACCCTTACCATGGTGACCGTGCTGCCGATTTACTTGTTGAGTTCTTTGAGAAGGTT AAGGTTGATCCAACTCACTGGGACAATATCTCTCATGGTGGTCTTCAGCGTATTGAAGAAAAGTAAGCTAATTTCATTTC AATTCAATTGCATTCTCACACTCTAACCATATCAATATATCATATCACATTGGGAATGCTTGTTCACTTAACATGTTTGG ATCTGCTTTTATCTCAAAATCAATTCTGACTAAGGCTTTTGTGCTTCCACAGGTACACATGGCAGATTTACTCTCAGAGG CTTCTCACTCTCACTGGTGTCTATGGCTTCTGGAAGCATGTGTCTAACCTTGACCGCCTTGAGAGCCGCCGCTATCTTGA GATGTTCTATGCACTTAAGTACCGCAAATTGGTCCGTGACATGTTTTGTTTCCTCAGTATTGATTATGGCATTAGATGTC AAGTTACTAACCTGTTTTTTTTTTCATTCTATGTGCCTCAGGCTGAGTCTGTGCCCCTTGCTGTTGAAGAGTGAAAACAT GAGGCTGACGAAGAGTAGATAAAAGAAATGGAGGAACCGGCTTTTTCCTTTTTATTTTTATTTGGAGTCTGTTGTTTTGA GTCTTATAAATAATGTCAATTATTTTGATTTTGTTATTAAGCTTTGGATAAAATGAAGAAAAAAAAGAGTCATTGTCTTT TGTTGTAGCATGATGTGAATGTAATTGGAAAAAGCTTTGAAAGGGTGTTGTCCCCATCAATTCAATTTCAAGTAGTGCTT TCTTCTTTGTTCACTTTGCTGTTTGTTAATGACTTTTGTTGTCTTTATCCTTCAAAGTTGAAACCACAATAAAATTGGTA TACAGCAAATGATACTCCGCAATTTCATCCGGTATTATCTATCACACTATAATAGGGGGAAAAAAGCTAAAAAGTTAAAA CTGTTGTAATTGTCATTTTCAATTTTTTGTTGTTGGATTAGTGCTATTTCCAAGTGGACAAAACAATTGCT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0320300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCAATGGCCTGACCCGAGTTCACAGCCTCCGGGAGAGGCTTGATGAGACCCTTGCTACCAACAGGAATGAAATTTT GACCCTTCTGTCAAGGATTGAAGCCAAGGGCAAGGGGATCCTGCAACATCACCAGATCATTGCTGAGTTTGAGGAAATTC CTGAAGAGAACAGGCAGAAGCTAACTGATGGAGCTTTTGGAGAAGTTTTGAGATCCACACAGGAAGCCATAGTTTTACCA CCATGGGTTGCTCTTGCTGTTCGTCCAAGGCCTGGTGTTTGGGAGTATCTGAGAGTGAATGTGCATGCTCTTGTTGTTGA AGAGCTGCAACCTGCTGAGTTTCTGCACTTCAAGGAGGAACTTGTTGATGGAAGTTCTAATGGCAACTTTGTGCTTGAGT TGGACTTTGAACCATTTAATGCATCGTTTCCTCGCCCAACTCTGAACAAGTCAATTGGGAATGGTGTGGAATTCCTCAAT CGCCACCTTTCTGCTAAACTCTTCCATGACAAGGAGAGCTTGCATCCACTTCTGGAATTTCTCAGACTTCACAACTACAA TGGAAAGACTTTGATGTTGAATGACAGGATTCAGACCCCAAATGCTCTCCAACATGTTCTGAGGAAAGCTGAAGAGTACC TAGGCACACTTCCTCTTGAGACACCTTACTCAGAATTTGAGCACAAGTTCCAGGAAATTGGTTTGGAGAGAGGGTGGGGT GACACTGCTGAGCGTGTCCTTGAGTCCATTCAACTCCTTTTGGATCTTCTTGAGGCACCTGACCCGTGCACCCTCGAAAC TTTCCTAGGAAGAATCCCTATGGTCTTTAATGTGGTGATCCTTTCACCCCATGGTTACTTTGCTCAAGACAATGTCTTGG GTTACCCTGATACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTGCGTGCATTGGAGAGTGAGATGCTCCAACGCATT AAGCAACAAGGCTTGGATATTGTTCCTCGCATTCTCATTATCACTCGTCTTCTCCCTGACGCAGTGGGAACTACTTGTGG CCAACGTCTTGAGAAGGTGTATAACACCGAGCACTGCCACATTCTTCGAGTGCCCTTCAGAAATGAGAAGGGAATTGTCC GTAAATGGATCTCAAGATTCGAAGTCTGGCCCTACCTAGAAACTTATACTGAGGATGTTGCTCATGAGCTTGCCAAAGAG TTGCAAGGGAAGCCTGATCTGATCGTTGGAAACTACAGTGATGGAAACATCGTTGCCTCTTTGTTGGCACATAAATTGGG TGTCACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATACCCCGAATCCGACATCTACTGGAAGAAATTCGAAG AGAAGTATCACTTCTCATGCCAATTTACAGCTGATCTCTTTGCAATGAATCACACTGACTTCATCATCACCAGTACATTC CAAGAGATTGCTGGAAGCAAGGATACTGTAGGACAGTATGAGAGCCACACTGCCTTCACCCTTCCAGGACTCTACCGAGT CGTCCACGGTATCGATGTCTTCGATCCAAAGTTCAACATTGTCTCACCCGGAGCTGATCAGACCATTTACTTCCCGTACA CTGAAACTAGCCGTAGGTTGACATCCTTCCACCCTGAAATTGAAGAGCTTCTATACAGCTCAGTCGAGAACGAAGAACAC ATATGTGTGTTGAAGGACCGAAGCAAGCCGATTATCTTCACCATGGCGAGGTTGGACCGTGTGAAGAACATTACAGGACT TGTTGAGTGGTATGGCAAGAATGCTAAGCTGAGGGAGCTGGTGAACCTTGTGGTTGTTGCTGGAGACAGGAGGAAGGAGT CAAAGGACTTGGAAGAGAAAGCTGAGATGAAGAAGATGTATAGCCTGATTGAGACCTACAAGCTAAATGGGCAATTCCGG TGGATTTCATCTCAGATGAACAGGGTCAGGAACGGAGAGCTGTACCGTGTCATTTGCGACACGAAGGGAGCGTTCGTGCA GCCTGCTGTGTATGAAGCTTTTGGTTTGACAGTGGTTGAGGCCATGACTTGTGGGTTGCCAACATTTGCTACCTGCAATG GTGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGTTTCCACATTGACCCTTACCATGGTGACCGTGCTGCCGATTTA CTTGTTGAGTTCTTTGAGAAGGTTAAGGTTGATCCAACTCACTGGGACAATATCTCTCATGGTGGTCTTCAGCGTATTGA AGAAAAGTACACATGGCAGATTTACTCTCAGAGGCTTCTCACTCTCACTGGTGTCTATGGCTTCTGGAAGCATGTGTCTA ACCTTGACCGCCTTGAGAGCCGCCGCTATCTTGAGATGTTCTATGCACTTAAGTACCGCAAATTGGCTGAGTCTGTGCCC CTTGCTGTTGAAGAGTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0320300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MANGLTRVHSLRERLDETLATNRNEILTLLSRIEAKGKGILQHHQIIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLP PWVALAVRPRPGVWEYLRVNVHALVVEELQPAEFLHFKEELVDGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLN RHLSAKLFHDKESLHPLLEFLRLHNYNGKTLMLNDRIQTPNALQHVLRKAEEYLGTLPLETPYSEFEHKFQEIGLERGWG DTAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALESEMLQRI KQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVYNTEHCHILRVPFRNEKGIVRKWISRFEVWPYLETYTEDVAHELAKE LQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTF QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRRLTSFHPEIEELLYSSVENEEH ICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYSLIETYKLNGQFR WISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADL LVEFFEKVKVDPTHWDNISHGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVP LAVEE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45839
3 804 802 0.0 –
PANTHER
PTHR45839:SF15
3 804 802 0.0 –
Pfam
PF00862
7 552 546 1.9E-284
IPR000368
TIGRFAM
TIGR02470
23 801 779 0.0
IPR012820
Gene3D
G3DSA:3.10.450.330
24 144 121 7.7E-55 –
Gene3D
G3DSA:1.20.120.1230
145 274 130 7.4E-59 –
CDD
cd03800
277 761 485 1.15843E-145 –
Gene3D
G3DSA:3.40.50.2000
279 793 515 5.6E-260 –
SUPERFAMILY
SSF53756
294 762 469 3.45E-49 –
Gene3D
G3DSA:3.40.50.2000
526 752 227 5.6E-260 –
Pfam
PF00534
563 726 164 1.6E-30
IPR001296

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005985
Biological process Sucrose metabolic process The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside.
Subterm of
GO:0016157
Molecular function Sucrose synthase activity Catalysis of the reaction: UDP-glucose + D-fructose = UDP + sucrose.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0320300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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