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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0325100 |
| Transcript ID | LotjaGi4g1v0325100.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | B3 domain-containing protein; TAIR: AT1G32010.1 myosin heavy chain-like protein; Swiss-Prot: sp|Q0JP99|Y1341_ORYSJ B3 domain-containing protein Os01g0234100; TrEMBL-Plants: tr|K7K5N2|K7K5N2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0325100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:70342700..70346662) extracted from Lotus japonicus Gifu genome v1.2.
TACTTACGAAGCAAATTTTAGACATAATGAACACTACTCATGCTCAATTGTGAAGAGCTGAAGAAAGAGTGAGCCTTGCC TTCTTCTTGGGGTCGGAGGACACAAGACAAGATTGATGTCGGTATAGACTTGTTATTCTACTATTATTAAGAAACATAGT TTGTTCATTTTACATTTAACATATAAATTTCTTGTACCATCATCATATGTCTCATTTGTTTGATGAATGTTGAACAGGCT ATCAATCGTAATCCACCAAAAAAGTAAGTTAATTTTCTTCGCTTCTTATTTGGTCTCATAATGAATAGTAGAATACAATG ACTCACTCAACATTTTACTTATCTGTGTTGTGCATGCATATATAGACGAAAGAGTAGTACTTTTAACTATGAAGCTCAAT CTGCTGCTCTGCAACGTGCTAAAGAGATACAAGCTAAATTATCTCCTGAATTCCCAAGCCTTCTTAAGTGCATGCATCCA TCTCATGTATCTGGAGCATTTTGGCTTGTAAGATCTCACCCTCTCGATCTTAGGGTTTTAAATTGCGGTTGCAGTTACCG TTGTATTGCGAAAGATCAAACACTGTTTGATTGATGTGGTTGGAATTGATGCTGTCATGCTAATCGGGGGAATTCCAAAG CCCATTATTTTGCGGCTGCAATTGTAGTTGTGAACCGCAATTTTAATACCCTAATTCTCCATGCTTTTGCCTTTTCAAGT TAATAGTGAGAAGAGAAGCACTGACTACACACTTTTCTTGAACACATTTTACTCACTTTTTACAAAAATGAATTTACTTC TTTTAGAGTGTGTTCAAAAGAGTGTAGTATTTCTATGATTTGTATTATTAATATTCACCATGTTATTTATTGCCACAGAG TCTTTCAACCAAGTTCTGTCAGATGCATTTGCCAAAGGCTGATACCATTATTACTCTGGAAGATGAAAGTGGGGAACTAT ATGAAACCAAATATATTGCTGATAAGGTGGCCTTGAGTGGTGGATGGATGAGGTTTTCCATAGCTCATAACTTACATGAG ATGGATGTTCTCATATTTCACTTGGTCAAACCTTCCAAGTTTAAGGTAATTGTTTGATCTTTCACATTAAACATATATGT GTGTGTGTGTTTTGTCTCAACTCTCAATTCATTATATTATGATCTTCTTGCTAGTTTAAATACTTGTACTAGTTTTGGAA GTTGCAATCTTCAATATCTTAGATGTCCCTAGGTGTACATTGTAAGATCTCAGGGGTCAGATGAAGTGGATGGTGCTCTT GGCATGCTCAAGTTAGATAAGTGCAGAAAAACAAATGATGAAGTTAGTAGTGTTCTTGGTAAGTTTGTCATAGTTTTCCT TGCTTTTTGAAACTTGTATGCATCATGTTAATGTTAGATTTGAGATTTTTCACGTTTTAGCTATAATTACCTAGTTAGTC ATGATAACCTAGCAGTAATAATGACTAAGTTGTTTTATGCATGTAAGTGTTAGCCTTTAGTCTTTAGTCTTTCAGTTAGT ATACAAGTTAAATATCAATGAAATACTAGTAATTGTAAGAGTTCATACCATAGCTTGTAATTTTCCTCTTCATTTATAAG TTTGTTGTCTGCGTTTCATCTATATCCCTATCAGATGCAAAACAAGTAGAGAGCATAAAATTATATTTGCTGTCTCACTT CAGACACTACTCGAGGAAATGATCCAAGGATGATTTTTGGGGATAACTTATCTCAATCAGATCAGCTTGAAAATGAAAGT AAAGATTTATTCTCAGAAACTTCAGAATCTGTTATCAATAGTTTCGAACAAGTGACTGGTATTGAAAATTTCATCATCAT GGTGAATGGTTTGGTTATCTATTCGGAGCTCTCTGAACGCCTTTGGGTGAAGTATTACGAGCTATGCCGCAGCCAAAGAT GTTTTCTTCATGATAATCTTGTTAGCGGTCTTAACAGCAAACTGGTGGTTGGAATGATTACTGAGACCATTAACATTGCT GATGCCATTAAAGCCAGCAAGGTTACAACCTCTATGGATAATTTTGTTACATGGGACAAAACATTGAAAGCCTTTGAGGG CATGGGCATGAATGTGAGCTTTTTAATTACTCAGCTAGACCACCTCATGAAACTAGCCCTGAAACTAAAAAGGCACAAAG AGGCAAGACTTGAACGTCTCCATGCTAATGAGAAGTTGAAAGCTCTAGAAGCAAGAGTTTTGGAAGTGAAAAAGACCATA AGGGGACTTGATGAAGAGATTGCCATGGAGGACATGAACCCTGAGAGGGTGGAGACTATGTTTCAAGAACTGGTTAATGC TCCTTGGTGATGTAGCTGCTTCTTAGCTTTGACATAAGTTCTAGTATATAATATGATATAATAGACTTAGCAAAAGAAAT AGTTTGAGCATTAGGAGGAACATGAAAGAGCCAAATAGTCTGAGAATTAGGAACATGAAAGAGCCTTGCTTGCTCTTGCT ATTAGAACTTCACAGTTGTTCTGTTTCTTTTGTAGGACCTTAAGCATCTTGTTGTTGGATTCTGGATGTGACTCTTAATT ACAAGTAGGAAAAGTTTTCCGTGTAACTTTATTATGAACTAAGCCCCAAAAAAGTAACTTATTGTACCACAAAGCACGAA GTTCAAACTAGCGTAATGTTATTTTAGCTTAAGTAGAGGTTTCGAGTTCGGGTATCTCCAACAGGATTGATTGCCTCAGC ATGATTATAAACCCACATTGAGTCAAAACCATGGTGGATATAAGCAACTTTCTTTAGTTTTTCTGGATGTTCCTCGTGAT TTAGGCGGCTTCACTGTATGCATACAAAGATGCTAAGTAACCTATTTTGAACTAAGTAAATTACTTTGGTTGGACTTGGC AGTCAAGTTTAATAGTGCTAGTGCTATCAGCATTAGGTAAAAAATTTAATGAAGAGAAATGACTGATGTTGAAACCATTA TTCATTAACAAGATGAATTGAATTGGATGCTGCAAATCAATAGAAATTCAGGTTACTTCTATCTTGAATGCTAATTCAAA TTTAATGGGCACAGTGACTGGAACAAACGACAACACCATTACCAACAAGTAACTAAAGAAAACACTGAAAGTCAAACATG CAAAAATCTGCACTGAGCAAGTACAAGGTAGAATGAAGACAGAACAAGATTGCCATGGTGCCTCATGGTTCAAAATCAGT CTTCACCCACTTCCCATATTTGCTATTCATCTTCTCATCAAACTCCTTATCCTTAACCTCAGCAATTTTGCTCGCATTAG CCATGGATTCCTCTTGCACTCTGGCAACCCTTCTACTCCTCTTCTTCGCTGAAGCCTCTTTCTCTGCTTCCAATCCTTCA TAGTCTTTCACCAAACAGCTATGCACTGCACAGCTCAACACCAACACCACCATTTGCAACATGCACATGGCCATCAAAGC CCCACACTCAACCCTCACCAAGAGCTTCGCTTCCTTTGGATCCCGCGGTGACTTCAAAAGGGTCAGGCTCGCTTTCTCTT TGGTGAACAAGGCTAACATGGCAAGAACCTGTCCTGTCAAAGAGGCAAGTGTGAGGGAAATGTGGGTGAGGAAACAGAAG TGTGTAAGGTGGGAGTAGAAGCCTATGAAGGATGAGAGAAGTGAGATGCTAGAAACCATGAGGAATGCCATGCCAAGGGA AGTTGGGGGCATTTTGAGGAGAATGGTGGGTGCGAATGAGGCGGCGGAAAGGATGAAAAGAGTGAAATTTAGACAGCAGA GGAGGAGGGTGGTGAAGGAGCATGCCTTTCTGAGCTTGGAAGAAGCCATTTTTGGTGTTGGTTTCTTGAGAATATTGTCA AAATTTGATGGTTTGAAGAGGGTGAAGAATTTCAAATTTATAGGAATGTGAATTGGTGCCGTTATGTACTGGCTAACAAC GGCTAGCATAGAGCAGGCCCCACTTTATTCATTCGAGAAAGTG
CDS sequence (LotjaGi4g1v0325100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTTTGGGGATAACTTATCTCAATCAGATCAGCTTGAAAATGAAAGTAAAGATTTATTCTCAGAAACTTCAGAATC TGTTATCAATAGTTTCGAACAAGTGACTGGTATTGAAAATTTCATCATCATGGTGAATGGTTTGGTTATCTATTCGGAGC TCTCTGAACGCCTTTGGGTGAAGTATTACGAGCTATGCCGCAGCCAAAGATGTTTTCTTCATGATAATCTTGTTAGCGGT CTTAACAGCAAACTGGTGGTTGGAATGATTACTGAGACCATTAACATTGCTGATGCCATTAAAGCCAGCAAGGTTACAAC CTCTATGGATAATTTTGTTACATGGGACAAAACATTGAAAGCCTTTGAGGGCATGGGCATGAATGTGAGCTTTTTAATTA CTCAGCTAGACCACCTCATGAAACTAGCCCTGAAACTAAAAAGGCACAAAGAGGCAAGACTTGAACGTCTCCATGCTAAT GAGAAGTTGAAAGCTCTAGAAGCAAGAGTTTTGGAAGTGAAAAAGACCATAAGGGGACTTGATGAAGAGATTGCCATGGA GGACATGAACCCTGAGAGGGTGGAGACTATGTTTCAAGAACTGGTTAATGCTCCTTGGTGA
Protein sequence (LotjaGi4g1v0325100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIFGDNLSQSDQLENESKDLFSETSESVINSFEQVTGIENFIIMVNGLVIYSELSERLWVKYYELCRSQRCFLHDNLVSG LNSKLVVGMITETINIADAIKASKVTTSMDNFVTWDKTLKAFEGMGMNVSFLITQLDHLMKLALKLKRHKEARLERLHAN EKLKALEARVLEVKKTIRGLDEEIAMEDMNPERVETMFQELVNAPW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 204 | 196 | 4.4E-62 | – | |
| PANTHER | 9 | 204 | 196 | 4.4E-62 | – | |
| Coils | 149 | 183 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0325100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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