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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0325500 |
| Transcript ID | LotjaGi4g1v0325500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | B3 domain-containing protein; TAIR: AT5G23780.2 agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 9); Swiss-Prot: sp|Q0JP99|Y1341_ORYSJ B3 domain-containing protein Os01g0234100; TrEMBL-Plants: tr|K7K5N2|K7K5N2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0325500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:70394455..70395938) extracted from Lotus japonicus Gifu genome v1.2.
AGGTGTACATTGTAAGGTCACAGAAGCCAGATGAGGTGGATGGTGCTCTTGGCCTGCTCAAGCTGGATAAGTGTGAAAAA GCACCAAAGAATGAACTGGATATGGAAAGTATTGCTGGTAAGTGTGGCATAGTCCTCCTTGCTTATGTAACTTGTCTGCA TTTTGAAGCAAATCAAGTAGGATAGTCATTGAGGCTCTTAAAAGAACAAATTATCTGTTTAAAATTGATGGTGGGCTACA CTTTCAGCATATTTGGATCAGCTTCTCTTTCTTTATAATCAATTTTATGCCCAGAAGCTGCTGTTCTCTCCATAATTGAT TTGACTTGAGAATCATAAATCATTAGTAGAAAGATTTCCAAGCATTTTAATAGTTTTGCCTCATAAGTGATTGTGGTGCT TCCAATTGTAGAACCAATTAACCAAACACTACTAACATGTTTGGTTTACCATGCGGAATGCTGTAGAGTCAATTCTGCTT AACTGCTGACTAAATCGTGAAACCAAATATGCACTGAAAATTGTATAGATTTGCTATCTCATTTTTCAGGCGCTATTCAA GGAAGTGATCCAGAGAATAGGAGGGAGGTTTTGGTTTCTAACTCAACTCAAACTGAACAGCTTGACCAGGAAAGTGGAGA TTTAAGCCTTGCAGGGATCAGATTAGCAGAATTTCCTATCAGGTTTGAAGAAGTGACTGGCATTGAGAATTTCAGCATCA TACTAGATCGCTGGGTTATGGATTCAAAATTCACTGAAGACCATCGGGCCAAGTATTATGAGCTCTGTCGCAGCCAGAGA TGTTTTCTTCATGAGAACCTTCTTGGGGGTCTTAACTTCAACCTGATGGTTGGAATGATTCAGGAGACTATTGTCATTGC TGAGGCCATTGAAGTTAGCAAGATCACAACCCCTATGGATGATTTAGTTGTATGGGACAAAACATTGAAAGGCTTAGAAA TCATGGGGATGAATGTGAGATTTTTGCTGACTAGGCTCGACAAGCTGATGAAACTAGCCTTGAAACTGAAGAGGTACAAA GATGCAAGGCTTGAACGTCTCCAAGCTAAGGAGGAGCTGGAAGCAATAGAAGAGATTGCTTCGGAAGTGAAAAAGACCAT AAAGAAACTTGATGAAGAGATTGCAATGCAGGAGAGCCCTGAGAAGGTGGAGGCTATGTTTGAAGAACTGGCTAATGCTC CTTGGTGATGTTGTGTTGTGTCCTAGTACATTGCTGCTTCTCTTCTCAGCTTGGACATAAGTTTCAATTTATGATATTAT AGACAAAGAAAAAGAAATAGTTTTGTGTTTTGGATTGGGAACATGAAAGAGCTTTGAACTTCCTTTACAACTAGACAATC GTTCTGTTATTTTGTGAAGCTATGACTTCTAAGTATCTTTCTGTATATTTTGTTACATCAGTGTGCTGATGTGGATTTCA GGATTTTGGATTGTGACTATTAATTATAAGTAGGGAAACTTTTC
CDS sequence (LotjaGi4g1v0325500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGTATTGCTGATTTGCTATCTCATTTTTCAGGCGCTATTCAAGGAAGTGATCCAGAGAATAGGAGGGAGGTTTT GGTTTCTAACTCAACTCAAACTGAACAGCTTGACCAGGAAAGTGGAGATTTAAGCCTTGCAGGGATCAGATTAGCAGAAT TTCCTATCAGGTTTGAAGAAGTGACTGGCATTGAGAATTTCAGCATCATACTAGATCGCTGGGTTATGGATTCAAAATTC ACTGAAGACCATCGGGCCAAGTATTATGAGCTCTGTCGCAGCCAGAGATGTTTTCTTCATGAGAACCTTCTTGGGGGTCT TAACTTCAACCTGATGGTTGGAATGATTCAGGAGACTATTGTCATTGCTGAGGCCATTGAAGTTAGCAAGATCACAACCC CTATGGATGATTTAGTTGTATGGGACAAAACATTGAAAGGCTTAGAAATCATGGGGATGAATGTGAGATTTTTGCTGACT AGGCTCGACAAGCTGATGAAACTAGCCTTGAAACTGAAGAGGTACAAAGATGCAAGGCTTGAACGTCTCCAAGCTAAGGA GGAGCTGGAAGCAATAGAAGAGATTGCTTCGGAAGTGAAAAAGACCATAAAGAAACTTGATGAAGAGATTGCAATGCAGG AGAGCCCTGAGAAGGTGGAGGCTATGTTTGAAGAACTGGCTAATGCTCCTTGGTGA
Protein sequence (LotjaGi4g1v0325500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESIADLLSHFSGAIQGSDPENRREVLVSNSTQTEQLDQESGDLSLAGIRLAEFPIRFEEVTGIENFSIILDRWVMDSKF TEDHRAKYYELCRSQRCFLHENLLGGLNFNLMVGMIQETIVIAEAIEVSKITTPMDDLVVWDKTLKGLEIMGMNVRFLLT RLDKLMKLALKLKRYKDARLERLQAKEELEAIEEIASEVKKTIKKLDEEIAMQESPEKVEAMFEELANAPW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 31 | 231 | 201 | 4.7E-58 | – | |
| PANTHER | 31 | 231 | 201 | 4.7E-58 | – | |
| Coils | 175 | 209 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0325500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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