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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0337000 |
| Transcript ID | LotjaGi4g1v0337000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF789 family protein; TAIR: AT4G16100.1 heat shock protein, putative (DUF789); Swiss-Prot: sp|O46502|SCTR_RABIT Secretin receptor; TrEMBL-Plants: tr|K7MJP4|K7MJP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0337000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:71745779..71750484) extracted from Lotus japonicus Gifu genome v1.2.
TTTTAACATTTTACACGTTCACTCTAAAATTGAATCTATGATATCTGACATCACATCTCCTAGTTTAGTTTAAGTAGTTT AAGTTTAAGTAGAGAGACCAAAATCCAAATCCAAACTCAAATCACTTGTTCTTGTTGTTGTTGGAGGCTGTCTAAATAAT AAAACCCTTCACATTCTCACTCTTCCCCTCTCGCTTCTCTCTTCCACTCTCTACCCTTAAACCTAACCCAACGACGTCGT TTCACCCTCCCAATTTTCAAAACCCACCACCGTGTCAATGTCGGCCACTGGCGGAACCCGCAACCGCAATCGCCATGTCG GCGACGACCGTTTCTACAGCCCGCCACCGTTGCGGAAACACAAAGAAAAGCCCGACGACCAACACCACCACCAGCAACAA CACAAGCGGTCTTCGCTCTCCAGAACTTCATCGGAGAACCGCCCTGGCTCCTCCTCCGATTGCTCGATTTCTTCTCGGGC CACATCTGACATCTCCAATTTGGATCGATTTTTGGAGTACATCACTCCACATGTTCCCGCCCAGTACCCTGCTAAGGTTC CATCTCCAATTCACACATCATTTCAATTTTCAATTGCGCCTTTTCATTTTGTTTATTGAATTTTGTGTTTTTCTAGTCAC TGCCCACCATTTTCATGGTTGTAATTTAACTCAATTCGCAGATAAGTATAGCTACAATGGACCCTGTTAGTGAGTAAATC AATATATGTTATCTTAAATCGGTTAATGTTCGATATTCGTAGATGAATGGCATGAAGCTTTTGTAAATTATGTGTTGCTT TAGGGTGTCCCTTCAATTGAGCTGTTGCATACTACATAGCTCAATGTATGTTACTTGACTGCTTGCTATTAAGTGTATGT TTGGATACCCGTTAGACGAGGTGAAAGGAACACTCATTCTCCGTAAACATAAAGTAGTTTTAATTTTAATTAAACTGTTA GACAAACATACATTTAAGGTTGCATGTGTTTTTGGTTTGTTTCGAAGGACATTTGGCGTATTTGGGTGTTGATAATTTTG TTTGTGAATGAACAGACAAGCTCGAGGAGATGGAAAACGAAGGAGGCGGAACTACAACCATATTTTGTACTTGGGGACTT GTGGGAGTCGTTTAAGGAGTGGAGTGCATATGGGGCAGGTGTTCCTCTGGTGTTGAACGGGAGTGAATCCGTGACACAGT ATTACAATGTCTCCTTGTCTGCCATTCAGCTGTATATCGATCCATCAAAACCTTCCTCCCGGTTAAGGTGAGAGTATGTT GCCATGAAACATGGCATTTCGAAATGCACCTCTTATATGATATAGCAAATTACTTTCATTTGAATATTCTACTGCAATAT TGTCTTGTTTCTTCAATTCAATGTAATACTTTTCTTTTGTTATAACTACTGGCTTAAACATACCTTTTCTCTACTTATGC ATCTTATTCTGCCTGTCTTTCAAATGTGGTTCATATTACCAACTAAGAAGTAGACAGTTTTCTCATAGCCCTTTTATGCA AGGTAAAACATTAAAAGAAGGATCTCGTATGTTATTGATCATCACGTATTCACATCAATATTCTTCGTAGTAGCATGAAG CAAAGCCTTTGCTGTTTTGAACCTATGAGAGATAGATCTAGCACTCTAAAGTCTAAATTCACGTTGGTTTACACTGACTG TCGTTTCTGATTCCGTCTGCATCCTTTTAAAATTTATCCATACTAAAGAAATTTGATACTATATAACCTGCTAAATTCAA TTGGCCTTGAACAAATGCTCTTTTTTCTCTTCAAACTCACAAAGAATTGGCAGATTACTCTCCCTTGACTACCCTGCCGT GTTTAACTCTTGGACTATTTATCTACGAGGTTTGATGTATTTGTAAACTGTGTGTCTATTTTTCTTGTGGGCAATGAAAG TCTTAATTTTTCTATTGGATTACTTAATCCTAATGTTTTAGAAAATATGACTGAGTTTTTTATAATGGCCAAGGTGGGGA GTTGTTATCAATACCTTTTTGTAGTAATAATATTTTCTTTTGCTTTCAAAGAGAAGTCAAAATTAATTTCTTTAAGTACT TTTATATTTTTGGTTTATTTATTTATTTATCTTATTCACCCATAGAATGATTATGAAATGAAAATTTGCAACGTTATGTA CGCAAAATACTTTATTTTATCTAAGGGGAAAAATAGTATGAGTATCTTATGGGTTTAATTGTACTGATGTATTTTCTGTA TGGTTTGATTTCAGAATACATCGATGAAACATTTTTGTATGTCTTTTTGTGGTTTTTGATTTTGAATTCCTTTTGGGAAA AGATTTTTGCAATGACCAGCTGTTATTGGCTTATGTGAGGGTAGATATACTGAACAAAAATGGATATCAATAATTTTGGC TTGGCTTCCAATCATGGAGCTATAAAGATGGGAGAGGAAACAAAAGACTAACTAGCTTAAGAATCACATGCTGTCCTATC CAGTATTAGATTTCAGGCATGATTTATTAAGTAGACCATGATGTTCATATCAAATTGTCTACATTTTTGGAGGTTGATGG GTAAGTTCGTAACATATTTACATGTCAGGGATGTATGATTTAAGAAACAGGATGAGCACAATAACAAAGTGACTACTGAA ACTCACCACTTGTGTTATGCTAGATCAGTTCAAGATAGTTGTTTTACTAGTAACCTACTAAAGTGAATCTACTTATCTCT TTACTCTTAGTTTATGACATTGTAGCTAACCTTCGGATAATTGGGTTGACTTTAGCATATTTGCTCCACTTTCCACCATA CTTTGCAGCTCTATGAAATACTCTGTAAATAGTATTTTCACCTGTTTTTACTCTGAACTTAAAGCTATTAATCATATCCA TTATGGAATATGGAAATGGGAAATCAATTCGTGGAATTTTTTACACAAAGTAAAAGTATTCTATTCTGCTGCTCATAGCC TTCGTATTGCTTACTTTCATGTGTTGGCCTTACTTTGAAACAGCACACCTATGATATACCCCTTTTCAAGACCACTTTTC CCTTTTAGCTATATTTAAAGACTTGGCATATTATCATTCTCATTTCCATTTTATTCCAGGAAACCCAGTCAAGAAAGTGA CTCTGAATCTGCTAGAGAGACAAGCAGTGATAGCAGCAGTGGCTATTGTCATGAAAGAGGAGCAAAGAGTGTTCATGGAA GTAGAAATCATCACAACATTTTGGAGGCAAACAATCATGCTTTAGAAAGGGTCTCACTAGGTAAACCTTTGATGGGTTCA GCAAATGATGAGACTGAGATCAGCGACCCACCTGGACAGCTTATATTTGAATACTTTGAGCATGAGTCACCTTATGCTCG TGAGCCATTAGCCGATAAGGCAAGATGTTATCCCTTGATTGACTTTCAAGTTAGATTATGTTGCTTTCTAATCCTAACAA GTATTCATATTGCTTGACTCAGATCTCTGAACTTGCGCGTCAATTTCCAGAGTTGAAAACATACTGGAGCTGTGATCTTT CGCCTGCAAGTTGGATTTCGTTGGCTTGGTATGTTTTTCTTGTCCTCTTGGTCTTCAGATTACTGTGATTGGATAATTGA CAAGTACTAATTTAAAATTATTTGTTGCTGTGTATATTATGTAGGTACCCGATATATAGAATACCTACTGGTCCAACCCT ACAGAGCTTGAATGCCTGCTTCCTGACCTTCCATTCTCTGTCAACAGCTTTACAAAGTATGTCCTTTTGTCTTTGTTTAG TTTGCGTATTTGCAAAATACTTGTAAACGGGCATCAACTATAACAGTTTGATCTTTGAATCAGGTTCAAATACTGATGGG CTTCATATTCATTATTCAAGAGGTCGGGAAAGATCATCAAAGATATCATTACCAATCTTTGGGCTTGCCCATAACAAGTT TAAAATTTCTGTATGGGATCCTGAGGGAGTTCCTGAATGTCAGAAAGCCAATTCTCTGTCACGAGCTGCTGAGAACTGGC TTAGGCTACTGCGAGTTAATCATCCTGATTACAATTTTTTCATGACCCATTATACATATTTGAGATGAACAGAGGTTAGT CTGGAAGAAGCAGCCCGACTCTCAATACCAGCTTATGTAGTCTCTGCCCAGTATACTTGTGTTGTCTATTAATTAAATGA ACCATTATTTTTCCATATGCTCATACATAACTGCCAGGATAATTGTGTTTTTCCTAAAATGGAACAGCAGGGTTGCTGCT TCTGTAAGGGGTTCAGGGGGGAATAGTTATTTAAAATTATACACATTTCATATTTGAAGGACCTGCTTCTGATTTCACAT GATGCAAAAGCCTTTAACCAAGAGCTTCTGCTTATTTTATGTCACCCTTCTGATGATGGCGAAAAGATCCAACTAATTTG TATTTCACCTGTTACTTCTTGTCTAGTGCAGGCAATGCTGACATCTTGAACCCCAGTATACTCTTCCTTATGGTAAGATG TTATTATTCTACAGGATTTGCTACGACTTACTAGCTTATCCAGAAGTGTTGGTCATTATTACTCATGACACTTCTTTCTC TTATGAAATATGGATTGTCATAAGCAAGAATGTATGGTTTTAATTGAAGGGTATTTGGGATGTTAATTCAAATGGGAGAT AGTCTACAGTGTTGAAATATTAATTGGGATTTTAGCTGTTGAAATTGTATTATTTTGTAGTCAGGA
CDS sequence (LotjaGi4g1v0337000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGGCCACTGGCGGAACCCGCAACCGCAATCGCCATGTCGGCGACGACCGTTTCTACAGCCCGCCACCGTTGCGGAA ACACAAAGAAAAGCCCGACGACCAACACCACCACCAGCAACAACACAAGCGGTCTTCGCTCTCCAGAACTTCATCGGAGA ACCGCCCTGGCTCCTCCTCCGATTGCTCGATTTCTTCTCGGGCCACATCTGACATCTCCAATTTGGATCGATTTTTGGAG TACATCACTCCACATGTTCCCGCCCAGTACCCTGCTAAGACAAGCTCGAGGAGATGGAAAACGAAGGAGGCGGAACTACA ACCATATTTTGTACTTGGGGACTTGTGGGAGTCGTTTAAGGAGTGGAGTGCATATGGGGCAGGTGTTCCTCTGGTGTTGA ACGGGAGTGAATCCGTGACACAGTATTACAATGTCTCCTTGTCTGCCATTCAGCTGTATATCGATCCATCAAAACCTTCC TCCCGGTTAAGGAAACCCAGTCAAGAAAGTGACTCTGAATCTGCTAGAGAGACAAGCAGTGATAGCAGCAGTGGCTATTG TCATGAAAGAGGAGCAAAGAGTGTTCATGGAAGTAGAAATCATCACAACATTTTGGAGGCAAACAATCATGCTTTAGAAA GGGTCTCACTAGGTAAACCTTTGATGGGTTCAGCAAATGATGAGACTGAGATCAGCGACCCACCTGGACAGCTTATATTT GAATACTTTGAGCATGAGTCACCTTATGCTCGTGAGCCATTAGCCGATAAGATCTCTGAACTTGCGCGTCAATTTCCAGA GTTGAAAACATACTGGAGCTGTGATCTTTCGCCTGCAAGTTGGATTTCGTTGGCTTGGTACCCGATATATAGAATACCTA CTGGTCCAACCCTACAGAGCTTGAATGCCTGCTTCCTGACCTTCCATTCTCTGTCAACAGCTTTACAAAGTTCAAATACT GATGGGCTTCATATTCATTATTCAAGAGGTCGGGAAAGATCATCAAAGATATCATTACCAATCTTTGGGCTTGCCCATAA CAAGTTTAAAATTTCTGTATGGGATCCTGAGGGAGTTCCTGAATGTCAGAAAGCCAATTCTCTGTCACGAGCTGCTGAGA ACTGGCTTAGGCTACTGCGAGTTAATCATCCTGATTACAATTTTTTCATGACCCATTATACATATTTGAGATGA
Protein sequence (LotjaGi4g1v0337000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSATGGTRNRNRHVGDDRFYSPPPLRKHKEKPDDQHHHQQQHKRSSLSRTSSENRPGSSSDCSISSRATSDISNLDRFLE YITPHVPAQYPAKTSSRRWKTKEAELQPYFVLGDLWESFKEWSAYGAGVPLVLNGSESVTQYYNVSLSAIQLYIDPSKPS SRLRKPSQESDSESARETSSDSSSGYCHERGAKSVHGSRNHHNILEANNHALERVSLGKPLMGSANDETEISDPPGQLIF EYFEHESPYAREPLADKISELARQFPELKTYWSCDLSPASWISLAWYPIYRIPTGPTLQSLNACFLTFHSLSTALQSSNT DGLHIHYSRGRERSSKISLPIFGLAHNKFKISVWDPEGVPECQKANSLSRAAENWLRLLRVNHPDYNFFMTHYTYLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 66 | 66 | - | – | |
| PANTHER | 9 | 391 | 383 | 3.3E-134 | – | |
| PANTHER | 9 | 391 | 383 | 3.3E-134 | – | |
| MobiDBLite | 10 | 41 | 32 | - | – | |
| MobiDBLite | 45 | 66 | 22 | - | – | |
| Pfam | 73 | 389 | 317 | 1.9E-102 | ||
| MobiDBLite | 158 | 199 | 42 | - | – | |
| MobiDBLite | 162 | 176 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0337000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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