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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0367500 |
Transcript ID | LotjaGi4g1v0367500.8 |
Related isoforms 8 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | MADS-box transcription factor; TAIR: AT1G24260.3 K-box region and MADS-box transcription factor family protein; Swiss-Prot: sp|Q39685|CMB1_DIACA MADS-box protein CMB1; TrEMBL-Plants: tr|A0A103XKV5|A0A103XKV5_CYNCS Transcription factor, K-box; Found in the gene: LotjaGi4g1v0367500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:74713851..74714219) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGGAGAGGAAGAGTGGAGCTGAAGAGAATTGAGAACAAGATCAACAGGCAAGTGACCTTCGCTAAACGCAGGAACGG ACTATTGAAGAAAGCTTATGAACTTTCCGTTCTTTGCGATGCGGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAAC TGTACGAGTTTTGCAGCAGTTCAAGGTATATATATATATGTGTGTTTTTCAACAAAATGCAACCACCAAAAAATAAATTA ATGCAAGCACATAAACATACAAGCACAGAAAAAGGAGGTGCAGAACCTTTCTTTTTCTTGTTAACCAAACTTTTATTATT GTATATATTAAATATTTTTATCGATCTTTGAGAGATCTTTGAGTTTTGA
CDS sequence (LotjaGi4g1v0367500.8) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGAGGAAGAGTGGAGCTGAAGAGAATTGAGAACAAGATCAACAGGCAAGTGACCTTCGCTAAACGCAGGAACGG ACTATTGAAGAAAGCTTATGAACTTTCCGTTCTTTGCGATGCGGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAAC TGTACGAGTTTTGCAGCAGTTCAAGAGAGATCTTTGAGTTTTGA
Protein sequence (LotjaGi4g1v0367500.8) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSREIFEF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0367500.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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