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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0431700 |
| Transcript ID | LotjaGi4g1v0431700.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Loricrin-like; TAIR: AT1G64140.1 WRKY transcription factor; Swiss-Prot: sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19; TrEMBL-Plants: tr|A0A0S3QXF7|A0A0S3QXF7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0431700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80568950..80570959) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACACAAGGTTCCAGCACTTGGGATTCCCTGTTAATAACTCTGCTAATGCATTCAAGATTTTGAACAATTCTATGCA AGTTGAAGGAAGTGGACTTGATTATTATGCTGCAGATACCGTTTTACGACTTGATTCTCCTGGTTCTTCAAATCCCTCCT ATAAGCCCTCCTCTAAGGGAACAAAAAGGAAGTGGGATTTAATTGATGGATGTATGGGTCATAGTGTTGGCTCTTCTTTG TCTCTTGGGCTCGGGCGTTCATCTAGTTCCTCAGACAGCAAGGGGAGTTCAGCTTTAGCTTGCACTGCTATGTCTTCAGG CAAAGATAATGATGAGGAATCATCTATGGATATTGAATTGGACTTTTCCCTCCATCTTGGCTGTGAGAAGGTGCAGAGCC TAAAGAAACCCTTCAGTTCCAATTTGAAGACACTGGAGTTGCAACCAAAGTTTGATTTGGAGTTGAGCCTTTCCACTTGG CCCTGTGAGTCAGATATTACAAGCGTTCATCTAAGTCCATCACCTCTTCAATTGAATAAGGAAATGCCATTAGTATCCAG TGGGGGTCAAAATGCAGATGAGGGGTCAACATCATGTAGTTGGAAGCCAGGGAATGTTTTTCCATCTTCGTCATCAAATA CCGGCACTAGTTTCCTCTTGAATCAGGCTTCTAAGCAATTTGATCATTCTCCCAATGTTCTGGACCTTTCCGCAACCAGA CCAAAAAGTTCAGTCACCTGTACTTCTGGGCTAACACAGCAGCAACAACCAGTACAACGCCAAAGTAATTCTAAGACATG TCAAGTTGAGGGATGTGGAAAGGGAGCCAGAGGTTCCTCTGGAAGATGTATATCTCATGGTGGTGGTAGGAGATGCCAGA AACCTGGCTGCCACAAAGGAGCTGAGGGTCGTACAGTATACTGCAAGGCTCATGGAGGTGGCAGGCGATGTGAATACCTT GGGTGCACAAAGAGTGCAGAAGGACGCACAGATTACTGTATTGCTCATGGTGGTGGCCGTAGATGCAGTCATGAAGGTTG TACCCGAGCTGCTAGAGGAAAATCTGGACTTTGTATCCGTCATGGTGGTGGCAAAAGGTGCCAGAGAGAAAACTGCACCA AAAGTGCTGAAGGCCTATCGGGTCTTTGCATCTCGCACGGCGGAGGTCGTCGATGCCAAGCTTCTGGATGCTCCAAAGGG GCACAAGGTAGCACCATGTTTTGCAAGGCACATGGTGGGGGGAAACGGTGTACAGCACCAGGGTGCACTAAGGGTGCTGA GGGGAGCACCCCCTTTTGCAAGGGTCACGGTGGAGGAAAACGCTGTACATACCAGGGTGGTGGAGTTTGCACTAAAAGTG TTCATGGAGGCACCAACTTCTGCGTGGCACACGGGGGTGGAAAGAGGTGTGCTGTACCAGGTTGCACAAAGAGCGCTCGA GGAAGGACTGATCATTGCGTCCGCCATGGAGGAGGCAAGAGATGCAAGTCCGAAGGGTGTGGAAAGAGTGCACAAGGCAG CACTGACTTCTGCAAGGCACATGGGGGAGGCAAGAGATGCTCTTGGGGCCACCCCGGATCAGAATATAGCAATCAAGCCG ATGGTCCTTGCAATTCGTTTGCGAGGGGTAAAACAGGTCTGTGTGCACTTCATAGTGGACTGGTGCACGATAAGAGGGTC CATGGAGGTGTCTCATTAGGATCTGTTGTTCAGGATCCTCGTTCTAGCAAACCAGATGAACTAAAGCACATGGAAGTGGC TATGCTGAAAATAGGGTGTAGCCTCGGTACTGCTCCTCCAAGTGCTTGTTCTGGCTTTAATCAATATGAAGTTGCAAGTG CTGAGGAAAGTGGGCACATGCCAATGTCAGTTGCTGTTCCTGAAGGCAGGGTTCATGGCGGAAGCTTGATGTCAATGTTG ACAGGGAGTTCAAGCGGCGTGAGAGGTCTAGCTATTACTGATCCATCTGAGCCAATCAAAGGTTATGTCTTGCCCCAGAA TTGGATTTAA
CDS sequence (LotjaGi4g1v0431700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACACAAGGTTCCAGCACTTGGGATTCCCTGTTAATAACTCTGCTAATGCATTCAAGATTTTGAACAATTCTATGCA AGTTGAAGGAAGTGGACTTGATTATTATGCTGCAGATACCGTTTTACGACTTGATTCTCCTGGTTCTTCAAATCCCTCCT ATAAGCCCTCCTCTAAGGGAACAAAAAGGAAGTGGGATTTAATTGATGGATGTATGGGTCATAGTGTTGGCTCTTCTTTG TCTCTTGGGCTCGGGCGTTCATCTAGTTCCTCAGACAGCAAGGGGAGTTCAGCTTTAGCTTGCACTGCTATGTCTTCAGG CAAAGATAATGATGAGGAATCATCTATGGATATTGAATTGGACTTTTCCCTCCATCTTGGCTGTGAGAAGGTGCAGAGCC TAAAGAAACCCTTCAGTTCCAATTTGAAGACACTGGAGTTGCAACCAAAGTTTGATTTGGAGTTGAGCCTTTCCACTTGG CCCTGTGAGTCAGATATTACAAGCGTTCATCTAAGTCCATCACCTCTTCAATTGAATAAGGAAATGCCATTAGTATCCAG TGGGGGTCAAAATGCAGATGAGGGGTCAACATCATGTAGTTGGAAGCCAGGGAATGTTTTTCCATCTTCGTCATCAAATA CCGGCACTAGTTTCCTCTTGAATCAGGCTTCTAAGCAATTTGATCATTCTCCCAATGTTCTGGACCTTTCCGCAACCAGA CCAAAAAGTTCAGTCACCTGTACTTCTGGGCTAACACAGCAGCAACAACCAGTACAACGCCAAAGTAATTCTAAGACATG TCAAGTTGAGGGATGTGGAAAGGGAGCCAGAGGTTCCTCTGGAAGATGTATATCTCATGGTGGTGGTAGGAGATGCCAGA AACCTGGCTGCCACAAAGGAGCTGAGGGTCGTACAGTATACTGCAAGGCTCATGGAGGTGGCAGGCGATGTGAATACCTT GGGTGCACAAAGAGTGCAGAAGGACGCACAGATTACTGTATTGCTCATGGTGGTGGCCGTAGATGCAGTCATGAAGGTTG TACCCGAGCTGCTAGAGGAAAATCTGGACTTTGTATCCGTCATGGTGGTGGCAAAAGGTGCCAGAGAGAAAACTGCACCA AAAGTGCTGAAGGCCTATCGGGTCTTTGCATCTCGCACGGCGGAGGTCGTCGATGCCAAGCTTCTGGATGCTCCAAAGGG GCACAAGGTAGCACCATGTTTTGCAAGGCACATGGTGGGGGGAAACGGTGTACAGCACCAGGGTGCACTAAGGGTGCTGA GGGGAGCACCCCCTTTTGCAAGGGTCACGGTGGAGGAAAACGCTGTACATACCAGGGTGGTGGAGTTTGCACTAAAAGTG TTCATGGAGGCACCAACTTCTGCGTGGCACACGGGGGTGGAAAGAGGTGTGCTGTACCAGGTTGCACAAAGAGCGCTCGA GGAAGGACTGATCATTGCGTCCGCCATGGAGGAGGCAAGAGATGCAAGTCCGAAGGGTGTGGAAAGAGTGCACAAGGCAG CACTGACTTCTGCAAGGCACATGGGGGAGGCAAGAGATGCTCTTGGGGCCACCCCGGATCAGAATATAGCAATCAAGCCG ATGGTCCTTGCAATTCGTTTGCGAGGGGTAAAACAGGTCTGTGTGCACTTCATAGTGGACTGGTGCACGATAAGAGGGTC CATGGAGGTGTCTCATTAGGATCTGTTGTTCAGGATCCTCGTTCTAGCAAACCAGATGAACTAAAGCACATGGAAGTGGC TATGCTGAAAATAGGGTGTAGCCTCGGTACTGCTCCTCCAAGTGCTTGTTCTGGCTTTAATCAATATGAAGTTGCAAGTG CTGAGGAAAGTGGGCACATGCCAATGTCAGTTGCTGTTCCTGAAGGCAGGGTTCATGGCGGAAGCTTGATGTCAATGTTG ACAGGGAGTTCAAGCGGCGTGAGAGGTCTAGCTATTACTGATCCATCTGAGCCAATCAAAGGTTATGTCTTGCCCCAGAA TTGGATTTAA
Protein sequence (LotjaGi4g1v0431700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTRFQHLGFPVNNSANAFKILNNSMQVEGSGLDYYAADTVLRLDSPGSSNPSYKPSSKGTKRKWDLIDGCMGHSVGSSL SLGLGRSSSSSDSKGSSALACTAMSSGKDNDEESSMDIELDFSLHLGCEKVQSLKKPFSSNLKTLELQPKFDLELSLSTW PCESDITSVHLSPSPLQLNKEMPLVSSGGQNADEGSTSCSWKPGNVFPSSSSNTGTSFLLNQASKQFDHSPNVLDLSATR PKSSVTCTSGLTQQQQPVQRQSNSKTCQVEGCGKGARGSSGRCISHGGGRRCQKPGCHKGAEGRTVYCKAHGGGRRCEYL GCTKSAEGRTDYCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRCQRENCTKSAEGLSGLCISHGGGRRCQASGCSKG AQGSTMFCKAHGGGKRCTAPGCTKGAEGSTPFCKGHGGGKRCTYQGGGVCTKSVHGGTNFCVAHGGGKRCAVPGCTKSAR GRTDHCVRHGGGKRCKSEGCGKSAQGSTDFCKAHGGGKRCSWGHPGSEYSNQADGPCNSFARGKTGLCALHSGLVHDKRV HGGVSLGSVVQDPRSSKPDELKHMEVAMLKIGCSLGTAPPSACSGFNQYEVASAEESGHMPMSVAVPEGRVHGGSLMSML TGSSSGVRGLAITDPSEPIKGYVLPQNWI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 647 | 647 | 3.9E-264 | – | |
| PANTHER | 1 | 647 | 647 | 3.9E-264 | – | |
| MobiDBLite | 83 | 114 | 32 | - | – | |
| MobiDBLite | 83 | 109 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0431700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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