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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0181000 |
| Transcript ID | LotjaGi5g1v0181000.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein root uvb sensitive 2, chloroplastic; TAIR: AT2G31190.1 root UVB sensitive protein (Protein of unknown function, DUF647); Swiss-Prot: sp|Q9SJX7|RUS2_ARATH Protein root UVB sensitive 2, chloroplastic; TrEMBL-Plants: tr|A0A0S3SRD5|A0A0S3SRD5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0181000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:46187114..46191811) extracted from Lotus japonicus Gifu genome v1.2.
TGTCAATACTGGGGTTGAAAATGGTGGTTTAAAAGCTGAAAACTGATTTTGAGTTTCTTGAAAGTGCCTCTATTACTAAT CCTTTGCTTTCATCGCCTTAACATGTATTTTTTTTTCTCTCTTTAGGTAGAGCTTGTTGGTGATACTAGACCATTTTACC ACAGGGTATTTGAGTCTTTCCTGAATAAATTTTTCCCCTCAGGATATCCATACAGGTTGCTTGATATTCTCCTGAATATG CTGTATGCCATGGTTATGTCTTTGGCCAGCAAGTTCACATTTTCAGTTTTTGATTTGCAGTGTCAATGAAGGGTACTTCA GGTTCACACAGTTTCGAGCACTGCAGCACATTGCCAGTTCAGCACTATCGGTGCTATCAACCCAGGTCTTGTTCTAATAG TTTAAAAGCCTCAGCAGAGCATACAATTGCTTTTCTGATCACTGATATAAAGTTCTTTTACTTTGAAGATTCACTTCTTA ATGTTGAAACTAAGGTGCATTTTGGTTTTGATTATTGTTTAGTGAAACTTCACTTTCTTTTCATACAACAACCCAAAGAC ACAGTAGATGTTGACATGTGTGGGCAGATAAATTAAATAAAACTGATTTATCATTCGATTACGATATATTACTCGAAAGA GTGAATAACTAAGAGGGAATGTTGGTGAAGGAAATTGGAAATAAAATGAAGGAATAGTTAGTCAGATTTATCTTCAAGAG TTACTCATATATATCATTAAACATATCTAAAACGACACTTAAGGGAAGTATAAGAGTACATGAGTTTTTCTGGTGACAAG GAAAGAGAAATTCCAGCATGATGAAAAATGGATGTTTGAAGGGAAGATGAGGTGTCATGAGGGGGCAAGGAAGAGCTGAT ATGGTGACCGAGGACCCTACAACCTGTTAGCCTTTTTTATATATTATAATCTCTAATGCCTACCTGCATAGTCAAATGGA TCCTCTCCAGCATGTCTCCAGCAAAAATCTTAGCCATTGATTTTTATATGTAGCGGTTAAGACCACTAATGAAAAATTGA ATTTGGTTAAACTAAATCACTAACTGATCAATTTGAATATACCATGGGTCATCATAATGGCTGCAGAGGCTAGACAGTGG AAGAAGATCCAGATCATTCTACATAGCACAGCTTTTTCTTAATTTTAATTGTTCACGGAAAAATCTTCATAAAACAAATG AGGTTGAAGTTGGTGTCCCTTAGCAGATCTCCAATGAGGAGAGTCTGTGGGAAGAATAAGGGGTAGTATAGAGAATTAGA GCCTTCCTAAACAATCATAAATAGAAATTACAGAATAACAGTGGTAACTGTTCAGTTAGTTTATTGTTCAGTAAAATTGG TACTAAGGCAGTAGGTAGAGAGATTTGGGGGTGGAATGTCGAATTTTTAGAGATAGAAATAAGGGAGAATGAAGAGGTGA GGTCTCTTGAGTACCTGGACTGAGTTATACTTCTGAATTATACATTGTTCTTGGTCTCTGCTCCGCATCACACTCATACT GATTCAGAAAATGATTGTCTAGTCCTAAAGATTAGTCATTTACCTCATTTTCTGGTTCATTTCTTTTAGTGTCTTTGGTC TGTATGTTTATTCTTCTGCAGTCACTGCTATTTGCTGCAGGCTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAGTTG GGTAATTTGATTCTGCTTTGCTATTGACAATTTCTCAGACTAGTCATACAATTACATTTAATATATATTTGTTTCTCTTG CTGACATTCAGATTCTAAAGGATGGTATGGAACATTTAGGGAACCTAATATGTAGTAATTTGGGTGCAAGAATGGATTCA GAGCCCAAACATTGGAGAGTTCTAGGTTTGCATTTGAGCGGGAACTTTCTTATTTCTTTCCCTTTATTAGCTCTAATTTG TCAAATTCTCTGGTTTGACTGCAATACGCCTTCCATCTTGCAGCTGATGTGCTCTATGATTTAGGCACTGGCTTGGAAGT GCTTTCTCCCTTATGTCCATATCTTTTTTTTGAGATGGCAGGCCTAGGCAATTTTGCGAAGGTAATATTTTTTCCATAAA GAAGTTACTTTTCCATGTTAGCATCTGTTGTCATATAAAGTTGACATAATGGTTATTGAGGGGTATTCACTAATTAGTTT AGATCGATTTTGGAGAGAAAAATATTCAATTAAGCCCCTTCAATTTTTTTATTTATTTATCCAATCAGATTGGTTCTAAA TGTAAATCCGATCCTATCCCAGTTTTGATTGAATTGATTTTTCAACTGCCTTGATTGTTTTCTTTGGGGGAGTAAATGAA TTTTTTGGGGGAATAAATGAATTAAAAAGTGATAAATATAATAAAAAATAATTCAAAAGATCAACTATCTAATCCATAAT TCATAATAGTATTGGTAGTATTTGATAGGAGCTGAAAAGCATAGGAGCAAAGTATAGCCGTATGGCATTTATTGATTGCC ACACAAGTACATTGGTGGAGAGTATTTAGAGTTACTCCACACCCTCAATTGTAATGCTTTGATCCTATATATAGGCAGTG TTCTACCTACTTAGACATGTCGGTTTACATTTTTTTATTTTTGGTTTCTAGTTGTTTAGATAACATTCTAGACTAGGTAG CAATCTAGATATCTCTAGAAAATTGCAGCACTTTCTAACAAGTATAACTAATTTTAGTTCAAAAATTCAAATCTTAACTA TAAGAAAAGAATTTACCTGAATAAAATTCTATCTTCATTGAAATATAATTTTTATAAATATATTGGACTGGGCGAGCCCC TAGGGGGCCTACGCCCAGGGGTTACCAACCATGCGGCGGTCGCCCAGCCTGGGAATTGGGCCTCCTCCAGCGAGGCGCAA CTGGCCCAACAAGAGGCAGTTACGCTTATTAGGCCCAGCTCCCCCACTATAAATCGGGAGCGGTTACCATTTGTAAAGGA CTCTTGGTTCATTTGCTAGATAACACATGAAATTCAGTTATATTCTCTCTCTAACTTTCTCTCTCTAAGTGCAATCTCTC TACTCTAGGGGCTATACCCTCTCTAGTTGTATGATAATTTTATAAACATATAGATCACCAAAGATATCAGTGGTATAAAT TATGCATGCTTTAAATTCTATATCTAGTTCAGTTTGGATTGAGTTGGATAATTTTGAAAATTAAATCCAAATTCCAATTC AATCCAGTTAAAGAATTTTTTTTGTTATCAGTTATCAGTTTTTATTGTTTATCATTAAATTAGATCAGTTTATGAATACA ATACTAAATTGTTCGTTCTCATTCATGCCAATATATGTCATGATAGGGAGCACTTCTCTATCTAGTGAAAACAACCGTTC AATGTTCATTTACCTATTTCATTTTGGGTGCAAAATAAGTTTTTGGAGTCAACAGGGGATGGCAGTTGTTGCAGCAAAAG CTACAAGGTTACCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGTGATCTATATGCTAAAGGGCATGCTATTTCA ACTGTGTTTAATGTTATTGGAATTGGAGTTGGGATTCAATTAGCATCTACTATATGTGCGTCAATGCAGGGAAAGGTATT AGAGATTATCTTTGTTTTTTCTTGGGTTTTGGTGTTCATTATTTTTCAGCTTTTGACCCATATAATAGTTTGTGCTAACG TTCTATGAATGTTGCCTATGTTTTCACTGGAATGCATGAGGATTAAGAAGAGTTTGTCTTTTGTGGAAATTTGAAGTTAG CTGCATGCCAGTTTTTCCAGTCACTCGTGAATTTTTTACTTAAACTGGTGGAAAAAAGTTAGGTTTATGGAAAAATTTCA AAATTTGAGCAAAGTAGTCTGAAAATTATGGGGTCAAGCCTCAGTGAGCAAGTATTATTCAAGAATATGAAAGTAAATAT TTTTTTCTTATTAGATCATCTATAGATGTAAATAACTAAATTACAATGTCCTATATTGATAATATGATCATATGATAAAG ATGCAACGTATTTATGAACCCAAACTGATGGATTATGAATCATTTTAAGTTGGTTGTAGGGCCTCTACTTTCAATGATAC ATGTATACAGCGTTTCTGAACAAATGAGAGCAACTCCTGTGAACACCTTAAATCCACAAAGAACTGCAATGGTTGTTGCT GATTTTCTCAAGGTGTGGTCTGGACTATTTTTTCTAATGATTTCTCTTATGCTTTCCTTTCTCTGTTTGAAAAATTGAAA TGCCTTGGCACTGTTAATTGAATTCAACCCAGGCAGGAAATGTATCAAGCCCTACTGATCTAAGATACCGCGAAGATTTG TTATTTCCTGGGCGGCTCATCGAAGATGCAGGAAATGTAAGAGTGGGAAGGGCTTTGCACAAGGCTATTAAGCCTTCAAG GCTTGTAGAACTACAACAAGTGTTTCCAGGGGAGAAGTTTCTTTTAAATCGCGAAAATAGATGCATTGACATGGTGTTGG AGCAAGATGCTACTGGTGAAGATGCATTGAGAGGGTGGCTAGTTTCTGCATATGCTGTACAAATTGACAAGTCCTCTCAT GAACTAAGTGCCAGTGTTATGCTACAGGCCTGTGAGAAGATGAATGAGGTCTTCCCTGTGTTTTTAAAAGAATTACAGAA TAAAGGATGGCATACAGATCGTTTTATGGATGGAACTGGAAGCCGCTTTGCACTGTAA
CDS sequence (LotjaGi5g1v0181000.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACATTTAGGGAACCTAATATGTAGTAATTTGGGTGCAAGAATGGATTCAGAGCCCAAACATTGGAGAGTTCTAGC TGATGTGCTCTATGATTTAGGCACTGGCTTGGAAGTGCTTTCTCCCTTATGTCCATATCTTTTTTTTGAGATGGCAGGCC TAGGCAATTTTGCGAAGGGGATGGCAGTTGTTGCAGCAAAAGCTACAAGGTTACCTATATATTCTTCATTTGCTAAAGAA GGAAATCTCAGTGATCTATATGCTAAAGGGCATGCTATTTCAACTGTGTTTAATGTTATTGGAATTGGAGTTGGGATTCA ATTAGCATCTACTATATGTGCGTCAATGCAGGGAAAGTTGGTTGTAGGGCCTCTACTTTCAATGATACATGTATACAGCG TTTCTGAACAAATGAGAGCAACTCCTGTGAACACCTTAAATCCACAAAGAACTGCAATGGTTGTTGCTGATTTTCTCAAG GCAGGAAATGTATCAAGCCCTACTGATCTAAGATACCGCGAAGATTTGTTATTTCCTGGGCGGCTCATCGAAGATGCAGG AAATGTAAGAGTGGGAAGGGCTTTGCACAAGGCTATTAAGCCTTCAAGGCTTGTAGAACTACAACAAGTGTTTCCAGGGG AGAAGTTTCTTTTAAATCGCGAAAATAGATGCATTGACATGGTGTTGGAGCAAGATGCTACTGGTGAAGATGCATTGAGA GGGTGGCTAGTTTCTGCATATGCTGTACAAATTGACAAGTCCTCTCATGAACTAAGTGCCAGTGTTATGCTACAGGCCTG TGAGAAGATGAATGAGGTCTTCCCTGTGTTTTTAAAAGAATTACAGAATAAAGGATGGCATACAGATCGTTTTATGGATG GAACTGGAAGCCGCTTTGCACTGTAA
Protein sequence (LotjaGi5g1v0181000.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEHLGNLICSNLGARMDSEPKHWRVLADVLYDLGTGLEVLSPLCPYLFFEMAGLGNFAKGMAVVAAKATRLPIYSSFAKE GNLSDLYAKGHAISTVFNVIGIGVGIQLASTICASMQGKLVVGPLLSMIHVYSVSEQMRATPVNTLNPQRTAMVVADFLK AGNVSSPTDLRYREDLLFPGRLIEDAGNVRVGRALHKAIKPSRLVELQQVFPGEKFLLNRENRCIDMVLEQDATGEDALR GWLVSAYAVQIDKSSHELSASVMLQACEKMNEVFPVFLKELQNKGWHTDRFMDGTGSRFAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 300 | 300 | 4.0E-174 | – | |
| PANTHER | 1 | 300 | 300 | 4.0E-174 | ||
| Pfam | 6 | 161 | 156 | 1.2E-38 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0181000.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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