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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0194400 |
| Transcript ID | LotjaGi5g1v0194400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 65-kDa microtubule-associated-like protein; TAIR: AT5G51600.1 Microtubule associated protein (MAP65/ASE1) family protein; Swiss-Prot: sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3; TrEMBL-Plants: tr|A0A151U5S8|A0A151U5S8_CAJCA Protein regulator of cytokinesis 1; Found in the gene: LotjaGi5g1v0194400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:48926166..48931847) extracted from Lotus japonicus Gifu genome v1.2.
GGGCAAGTAGAGAGAAGTGTAACTCCAAATCCAAATCGAGCGCTCTTCATCTTCAACGGTCCCCTTTTCTTCAAAACGGA TACATCACTCTCTCTCTCATCAATTCAAACTTCAAATTTTTTCCACGAAAATCCCACTTTCTCACTCACTCTCATTTTCT CGGGAAAATCCACTCGTTCCTTTTCTCACCACCGGCGAAACGAAACCCTAGCACCGGTTCATCCACCCATTCCCTCCGTT GTTCAGGTCAGTGTTCTCAGTACTCACATCTCTCATCTCGCTCCTCGAAATCTGAGCCATCCAAATCCCTAAAATGGGAA ATTGAAGCCACTTTCCAAATCCAAACTCGTTCAATTTAGTTTCTGTGTCATGCTTGTCAGATTCCATTTTCGTCGTCGTG AAGATCGGTTACTCTATTTCTCGCTGATGAACTCGCCCCCATTTTGAAATCTGAATTACTTAGCTACTTCCAGTTTCTTC TAGCTGGGATTCATAAACTGTTTCTCTAAATTAGATTAATTAACAGAACAAAACAATGCTCAAATTTGAGTTCTAATTGA ATTTCTGTTCAATTAATCTTCAATTTCTATGTTTCAGACGATGGGTTTTAGGAAATTCATGTTGCAGGTCTAGAACTAGC AGTGATAAATGTGTGTGTTTTAGGGTTCTGAGGTATTTGTTGTATAAAGAGAACAGTAGAGTGTGTACATTTGGGAATTT TCATTGTCTGCAAATTTTGCTTTTGGACCTAAGTTAAATTCATATGCTTTTTCTATATTGGCACCTCTTAGATTGAGTCC TGTTTGATTTTATAGTGATTATTTTTCGGCCGCAAGGTGTTTTGTTAGTTTCTATTTCTATGATAAGTAAATCGAATTAG AAAGATGGTTTCTATCATTATACATGCTTTGCTTGCTTTGATCTTTCTAATTTTGGAGACAATGTTTCTGGCAGGTACAA GTACTCCAAAATGTCTAAACCTCAAGGTGATCCCCTTTCGCAAGCTGAAACAACATGTGGGACGCTTCTGTATGAACTTC AGGTATTCATTAAATTTTGCTGCAATTATCTTTCCTGCATCCCCCCTGCCAGCTGATGATCCCCTTTTGCAAGCTGAAAT TGAATCTGTGTGAATCTCTCATTGTTTCCCTCAACTGATTAGATAATATGGGATGAAGTTGGAGAGTCTGATGCTGACAG AGACAGAATGCTTTATGAGCTTGAACAAGAGTGTCTAGAAGTCTACAGACGGAAGGTAGATGTGGCAAATCGGTCTAGAG CTCAATTAAGGCAGGCAATTGCTGATTGCGAGGCAGAACTTGCAGCTATCTGTTCAGCAATGGGAGAGCGACCTGTACAT ATTAGGCAGGTTAGATATTTTAAGAATTGCTATAACCTGCTTATTGTTGTTTTAGGGTGTGTCTATGTATCAATGAATGG GGTGGAAAATGGATTTTTATAACAAGATGGATCACCACCCTAAGTTGACATTAAATTTCCGTTTTCTTGTGTGTTTTCTG CCAAGATAACAAGTTGACCAGTTAAACTACTAATAAGATTGCACCCCCTGTCTTTCTCATTTTTCTAGGCTGATCAAAAT GCTGGAAGCCTGAAAGAAGAGCATGCAAGAATTCTTCCACAGTTGGACGAGATGCGAAAAATGAAGTCTGAGCGTAGAAA TCAATTTATTGAAGTTCAAGAGCAGATTCAAAGTCTCTCGATTGAGATTTATGGTCCCATAGAGTATATTCCTGCTACTG TAGATGAAACAGATTTATCCTTGAGAAAACTTGAAGAATTGCACAGACAACTGAATGCACTTCAAACTGAGAAGGTCAAT ATACTTCCATGTCTTTTTTATTGATGATCAACATACATAATTTCTTTCTTGTGCTACGTTAGTATTACTAATTACTAATT ATGCTCTTGTCTTGTTATCATGCAGAGTAACCGCCTAAAGAAGGTCCAGGAGCACCAGTACACTTTAAGTTCTCTTTGTT CAGTGCTTGGTTTGGACTTTAAGCAGACAATCAGTGGAATCCATCCCAGTTTAGGAGACTTAGAAGGATCTAAGAGTGTA AGCAATGATACAATACAGAAATTGGCTGTTGCTGTGCAAGAACTGCGGGAAGTTAAATTACAGAGAATGCAGAAGGTAAA GAATGTTTTAACAATAAGTTCTGATTAATGATTTAGTTTTCTTTCCTCTGGTTAATGGTTTAAATAACTTATGGTCGGCA GCTCCAAGATCTTGCTACAACAATGTTGGAGCTCTGGAACTTGATGGATACCCCAGTTGAAGAGCAACAAATGTTTCAGA ATGTTACCTGTAATATTGCTGCTTCAGAGCATGAAATAACTGAACCAAACTCCTTGTCCCTGGACTTCATCAATTGTGTG AGTTATAAGTTTATTGAATATAAGGATTATAGTTCATGGTTTAATTTGGTTCATAATCGATCGCTAAAAAAATAATAATG GCATGCAGGCTGAGGCGGAAGTATCTAGGTTAGAAGAGTTCAAATCGAGCAAAATGAAAGAGCTTGTATTGAAGAAGAGA ACAGAGCTAGAGGAGATTTGTCGAAAGACTCATTTGGTTCCAGAAGTAGATGGTGCAATTGAATATGTTTTTGAAGCTAT AGAATCTGGTAACTTCTATTTTTTATAGTAAGGTATTTCTGGACATGATTGCAATTTTTTTTTTGCAAACTTCAAAGTCT ACTTCTTTCTTCTTGATGTAGGATCTGTGGACCCTGCATGTGTGCTTGAACAAATTGAACTTCAGATAGCGCAAGTCAAA GAGGAAGCTTTTGGCCGAAAAGAAATACTTGAGAAGGTTGAGAAATGGTTAGGAGCATGTGATGAAGAGTCTTGGCTTGA GGAGTACAACAGGGTTAGTTAGTTGAATCCTCCTTCAACGTTGCCAGTTTGACTCCTTTTTTTCATAATCATGATTACAA TTTAATAAATTTACTGCTAATTTTGTTTATCTTTCAGGATGACAATAGATACAATGCTGGGAGAGGTGCTCATCTTACTC TCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTCAACAAAATTCCAGGTATTTGTAGTTCTTAATCATTACCCGTCTTATGG CTCTATGATGTAATACATCAAACTGAATGAAGAACCCTGCATGTAAAGGTGTCAATTTGGATATGAAATGATAGTTCTCA ATATTCTGACTTTGTTTGTGAGTTCCAAAAGCAATTCTAGAGTAATGAACACTAGTTAATCTCTTGATTGATACGACTTT TCGACATTCAACCTCATTTCTCTTCCAAGCCATCTGGTTGTGCTTCAATCATAAAACTTTTCTTTTTTTTTTCTTCTCTG TCAGTGTGTGTGTATGATTCTAATATGTCTCTCTTTTTGTATATAGCAATGGTTGATGCTTTGACTTCAAAAACTATAAC ATGGGAAAAGGAAAAAGGCATTGAGTTCATGTATGATGGTGTAAGTACTCCCTGATATGCCTGCCATAATCTTGAGCCAT AATGATTTCTTGATTTTTATTTTTATTATTTGCCTAGAGGATTGGATTACTTATTAGTGTCTTTTAGTTGCTCAAGTAAA TCTGCTTCAAACTGATTTCGTCTGTGTTTGGCTTTTTAGATTCGTCTACTGTCCATGCTTGATGAGTACAATATATTACG TGAGGAGAAAGAGCAAGAACGCCGTAGGCAGCGGGTATGGTCCTCTGCATTTAAATACGCACCTCAATTAAATTATGAAG TTATACATCCAATTATTGTCTCTGAGATTGGGTTTTGAAATCTAGGCAACATTTTATTGATCTGTGTATCATTCAAACAA ATAGATGTTTTGTAAATATTACTTTTTTGTTTCAGGACTTAAAGAAACTTCAGGGACAAATGATAGCGGAACAGGAGGCA CTATATGGGTCAAAACCAAGCCCTTCAAAGCCCCAGAGTGTGAAAAAGGGATCTAGGATGTCAACCGGAGGTGCAGCTAG TAGGAGAGTCTCCTTTGGAGGAGCAATGCTTCAAACTCCAAAACCCGATTCAAAAACTGCTAATTCACGTGCCATGAGAA AGACTGACAAAGCACACCAATTTGAGGATGATGGCATTTCATGTTTATCAGCAGGTGGGGTTTATTAATACTTTACTTAT CACCTCCTTTAAATAAATACTTTAGGGGTTTTCTTGCTTCATATAGTTTAACAATGATCAGAAAAAAATATTGTTGGCAA AATCATATTTTCGTTTCTTTTCCTTCGTTTTTTGTTTTTCCTTTCATCCTTTGAGGAAACAGGTGATTGTTTCAGATTCT TTTTTCAGTCTGTAAATTTACTTCTCAAAATAGATCAGCCTCAATTATTTTTGGGGGACCTATTTATGTTTTTCTTTGTT TTAGTAAATGATGCTCCTTAACAATGTCCCAACCACTCTTCTGGGTGATGGCTCCTTTGTTTGATTTTGTGCAGAACCAA TGATTTGCTAAGCTTTTCTATTGTTTCATATTGAAGTAGGAAGTGAAAAGCCACATCTCAGCAGCTCAGCTGATAGAAAT ATCAATTTCTTCCATTGCTCTTTTATTTATTTATTTATGTTAGTGTGTATCACTAAATTGCAGAAACAGTCAATATGATG TATATAACCCATACAAAGACATTTTCATGCATGCATTTACAACTCTTCTGAGTTTTTTCCTCTCACTATGTTAACAGCTA GAAGAGGGTTAGATATTGCTGGGGTTCCTATGAAGAAGCACTCATTTGGTGCTGGAAGTTCTCATGGTATAGAATCTCCT ATGACAAGACAACCCTTTTCGCCCATCACTTCTAATGTATCTGCAAAGGGGAGTACAGAAAATGCCGCAAATGAATTGAA TTTACAGAGTGGGAAGATGCAGAAAACAATGCCACTTAACAGTGTGCCATTCACTAGTCCCTCTAAGACAGTTACTGTGG TAGATGAAGAGAACAAGACTCCAAAGGCAATGCCTATTCCTGTCCCTGCAACACCTTCGACGGTGTCAGCTCCAATGAAT ATGGCCATGACTCCAAAGACAATGCCTATTCCTGTCCCTGCAACACCTTCAACGGTATCGGTACCAATGAGTATGGCCAT GACTCCAGTTCCTTCAACTGTTTTAATGAACAAGGCCCCACCTCCCTTGTCAGTTCAAGAGATTGAGTATTCCTTCGAGG AAAGAAGGCTCAGTTATATGCTAGCATGATTATATCTTGTCTGGTTTTCATTTTACTTGTTACCACCATAAGTCAATTGT AATTGGCTGTCTAATGGTGTACATTATGAGAAGTGAACGTAGATTAGGTTATGAACAAATTTACTGAGGAGGTTTTGCAG TGTAATGCGATTTATAGCATTTTGGATCAACTTATTATTTCTCAGAATCAATTCTGACACCTAGAAGCTACTGATGCTTC TCTCCATAATTGATTCTAGCTTTAGAATCAAGGCTTAATCCTCAAATTAGTCTCTATCTTTGTCTCGTCATCTGAACTAG GTCCCTCACCGGAAAATTTTTAGTAAAAGGTCCTCTTATATGTAAAACGTCTGGAGCAAGACCTCGCCGGAGCCCGGAGC TCCGGCGAATGATGAAATGGCATGCTGAGTGGATTAATGATGCTTATGTGGAATTTAAATTATTTTACACTTGGATAATT AA
CDS sequence (LotjaGi5g1v0194400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTAAACCTCAAGGTGATCCCCTTTCGCAAGCTGAAACAACATGTGGGACGCTTCTGTATGAACTTCAGATAATATG GGATGAAGTTGGAGAGTCTGATGCTGACAGAGACAGAATGCTTTATGAGCTTGAACAAGAGTGTCTAGAAGTCTACAGAC GGAAGGTAGATGTGGCAAATCGGTCTAGAGCTCAATTAAGGCAGGCAATTGCTGATTGCGAGGCAGAACTTGCAGCTATC TGTTCAGCAATGGGAGAGCGACCTGTACATATTAGGCAGGCTGATCAAAATGCTGGAAGCCTGAAAGAAGAGCATGCAAG AATTCTTCCACAGTTGGACGAGATGCGAAAAATGAAGTCTGAGCGTAGAAATCAATTTATTGAAGTTCAAGAGCAGATTC AAAGTCTCTCGATTGAGATTTATGGTCCCATAGAGTATATTCCTGCTACTGTAGATGAAACAGATTTATCCTTGAGAAAA CTTGAAGAATTGCACAGACAACTGAATGCACTTCAAACTGAGAAGAGTAACCGCCTAAAGAAGGTCCAGGAGCACCAGTA CACTTTAAGTTCTCTTTGTTCAGTGCTTGGTTTGGACTTTAAGCAGACAATCAGTGGAATCCATCCCAGTTTAGGAGACT TAGAAGGATCTAAGAGTGTAAGCAATGATACAATACAGAAATTGGCTGTTGCTGTGCAAGAACTGCGGGAAGTTAAATTA CAGAGAATGCAGAAGCTCCAAGATCTTGCTACAACAATGTTGGAGCTCTGGAACTTGATGGATACCCCAGTTGAAGAGCA ACAAATGTTTCAGAATGTTACCTGTAATATTGCTGCTTCAGAGCATGAAATAACTGAACCAAACTCCTTGTCCCTGGACT TCATCAATTGTGCTGAGGCGGAAGTATCTAGGTTAGAAGAGTTCAAATCGAGCAAAATGAAAGAGCTTGTATTGAAGAAG AGAACAGAGCTAGAGGAGATTTGTCGAAAGACTCATTTGGTTCCAGAAGTAGATGGTGCAATTGAATATGTTTTTGAAGC TATAGAATCTGGATCTGTGGACCCTGCATGTGTGCTTGAACAAATTGAACTTCAGATAGCGCAAGTCAAAGAGGAAGCTT TTGGCCGAAAAGAAATACTTGAGAAGGTTGAGAAATGGTTAGGAGCATGTGATGAAGAGTCTTGGCTTGAGGAGTACAAC AGGGATGACAATAGATACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTCAA CAAAATTCCAGCAATGGTTGATGCTTTGACTTCAAAAACTATAACATGGGAAAAGGAAAAAGGCATTGAGTTCATGTATG ATGGTATTCGTCTACTGTCCATGCTTGATGAGTACAATATATTACGTGAGGAGAAAGAGCAAGAACGCCGTAGGCAGCGG GACTTAAAGAAACTTCAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGGTCAAAACCAAGCCCTTCAAAGCCCCA GAGTGTGAAAAAGGGATCTAGGATGTCAACCGGAGGTGCAGCTAGTAGGAGAGTCTCCTTTGGAGGAGCAATGCTTCAAA CTCCAAAACCCGATTCAAAAACTGCTAATTCACGTGCCATGAGAAAGACTGACAAAGCACACCAATTTGAGGATGATGGC ATTTCATGTTTATCAGCAGCTAGAAGAGGGTTAGATATTGCTGGGGTTCCTATGAAGAAGCACTCATTTGGTGCTGGAAG TTCTCATGGTATAGAATCTCCTATGACAAGACAACCCTTTTCGCCCATCACTTCTAATGTATCTGCAAAGGGGAGTACAG AAAATGCCGCAAATGAATTGAATTTACAGAGTGGGAAGATGCAGAAAACAATGCCACTTAACAGTGTGCCATTCACTAGT CCCTCTAAGACAGTTACTGTGGTAGATGAAGAGAACAAGACTCCAAAGGCAATGCCTATTCCTGTCCCTGCAACACCTTC GACGGTGTCAGCTCCAATGAATATGGCCATGACTCCAAAGACAATGCCTATTCCTGTCCCTGCAACACCTTCAACGGTAT CGGTACCAATGAGTATGGCCATGACTCCAGTTCCTTCAACTGTTTTAATGAACAAGGCCCCACCTCCCTTGTCAGTTCAA GAGATTGAGTATTCCTTCGAGGAAAGAAGGCTCAGTTATATGCTAGCATGA
Protein sequence (LotjaGi5g1v0194400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKPQGDPLSQAETTCGTLLYELQIIWDEVGESDADRDRMLYELEQECLEVYRRKVDVANRSRAQLRQAIADCEAELAAI CSAMGERPVHIRQADQNAGSLKEEHARILPQLDEMRKMKSERRNQFIEVQEQIQSLSIEIYGPIEYIPATVDETDLSLRK LEELHRQLNALQTEKSNRLKKVQEHQYTLSSLCSVLGLDFKQTISGIHPSLGDLEGSKSVSNDTIQKLAVAVQELREVKL QRMQKLQDLATTMLELWNLMDTPVEEQQMFQNVTCNIAASEHEITEPNSLSLDFINCAEAEVSRLEEFKSSKMKELVLKK RTELEEICRKTHLVPEVDGAIEYVFEAIESGSVDPACVLEQIELQIAQVKEEAFGRKEILEKVEKWLGACDEESWLEEYN RDDNRYNAGRGAHLTLKRAEKARALVNKIPAMVDALTSKTITWEKEKGIEFMYDGIRLLSMLDEYNILREEKEQERRRQR DLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGSRMSTGGAASRRVSFGGAMLQTPKPDSKTANSRAMRKTDKAHQFEDDG ISCLSAARRGLDIAGVPMKKHSFGAGSSHGIESPMTRQPFSPITSNVSAKGSTENAANELNLQSGKMQKTMPLNSVPFTS PSKTVTVVDEENKTPKAMPIPVPATPSTVSAPMNMAMTPKTMPIPVPATPSTVSVPMSMAMTPVPSTVLMNKAPPPLSVQ EIEYSFEERRLSYMLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 634 | 634 | 0.0 | – | |
| PANTHER | 1 | 634 | 634 | 0.0 | ||
| Coils | 49 | 76 | 28 | - | – | |
| Pfam | 52 | 645 | 594 | 6.9E-143 | – | |
| Coils | 154 | 181 | 28 | - | – | |
| Gene3D | 366 | 499 | 134 | 1.4E-29 | – | |
| Coils | 458 | 488 | 31 | - | – | |
| MobiDBLite | 492 | 544 | 53 | - | – | |
| MobiDBLite | 500 | 515 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi5g1v0194400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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