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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0256700 |
Transcript ID | LotjaGi5g1v0256700.1 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Mitochondrial carrier protein; TAIR: AT1G14140.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q9XI74|PUMP3_ARATH Mitochondrial uncoupling protein 3; TrEMBL-Plants: tr|I3T406|I3T406_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0256700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56542870..56546308) extracted from Lotus japonicus Gifu genome v1.2.
TGGGAATGAATTTTTTTTCCGGTTATTTCTCGACATTGCTACAATAGAACGAGTACGCATGAGTTAGATTGTCTCACCAT CTCCACACACCACGGGTCCAATTGTCTCAGGTAATTCTGTATCTTATTTCGGAATCCATCATACTTGATTATTGTTAAAT TTGTTGATGTGATGTGATGTGTGGAAATTCGATATAAGCTTCACTTTGATTTTTAATATGCTATTTATTCAGATATTGGA GGAAATTTGTAGCTTGATTTATGATTCTCTCAATGTGTAGTAGGAATCATCATAGCCCAATTTCATTTTTCATATAATTT GGGTCATTCTTGTATGTAGTAGTACCCATGAAATCATCAGGCCATCAACATGGTGGAGTTGATAACACTCCCACAAAGCT TGTACTGACATCACTGTCAGCAATGGTAGCTGAGACCACAACTTTCCCCATAGACCTCATCAAGACCAGGCTCCAACTCC ACGGCGAGTCGCTTTCCTCGAGTCGTTCTACCGGTGCGTTTCGAATAGGTTTGCACATTGTTCGCGAACAAGGGACCCTT GGCCTTTACAAGGGCCTGTCTCCAGCAATTGTCAGACACCTACTCTACACGCCTTTTCGGATCGTTGGATATGAGCACCT GAGGAGTGTTGTTTCTGATGATAACGGGTCACTGTTTATCGTTGGCAAGGCTTTTGTTGGTGGAATCTCTGGTAGCTTGG CTCAGGTGAGAACTGTGTGGTCTGGGAATGTGGTTTATATTTCTGCAGAAAATTCTTGTCAATTTAGTCTTTTCTTTCAA TGGATGTAAGCGGAAACTTTGGTAATTGGTAGCTTATCGATTAAAAATGTTACCCATCAATGTTATAGTTAAAGGATAAG AATCTAAGAATATATAGTTACAGCCTCTTGATTCTGAATTCTATTAATGAGATGTTCAATGATAGAACTTTATGCCTTCG AAGAACACCATCGCAAGATTTTTAGACTCATCAGTTCTCAGTGTTATACGATTGATTGATATGGTATCAGATGTAGCATG GCTTTTGTTGGTTTTTTTTACTGATGTTGATATTAGTTACTAGAATTTTAAGCCTAATTGGACTATCTAGGAGACTAATC AGGTTTATACATTGCATCGGCCTTGTCTTGGTCCTGGTTATGCATGTTTCTGGTTTGTCCTCTGACAGTTCCCCTCAAGC TTAAAGTATACTAAGCTAAACATAAGACAAATAACACCGCCCACCTCAACCAAGTAACTTCAGTAACTAAAAGCCTTTTA GAAAGGGAAAGAGATTCATGTATTGAACTAATAGGAAATCTTTCAAATTTTCCCACCCCAGTTGGAGAGGTAGAAGCAAA AGAATAGGATGATGCTTTCAGCAGTTAGATACAAAAGTAGACTTTAGATACTAATGGATAAACAAATATCAAAGATAAAT GAAGAAATATCTTGTTAGCATTATGTTAAAATAGGAAATCTTTCAAATATTCACACCCTGCAGACAGTAAAATGTTTTTT TTCTTCTTCGAGTAATCACTGTTTTATCCAGAAGGTTTTAATTAACGGCTCACTATTATTTATTTTTCTTTGAAAGTTAC AATGTTCTATTATTTACTCTTAGTGGTACAGATTGTAGCAAGCCCGGCTGATCTTGTCAAGGTGAGGATGCAAGCTGATG GCCGAATGGTGAGCCAAGGTCTTCAACCTCGGTATTCAGGGCTATTTGATGCTTTCAACAAAATTGTTCAAGCTGAAGGG TTACAAGGACTATGGAAGGGTGTTTTTCCTAACATCCAAAGAGCCTTTTTAGTGAATATGGGAGAATTAGCCTGTTATGA TCATGCTAAACAAATTGTTATTAAAAGTAAAATAGCTGAGGATAACGTTTATGCCCACACATTAGCTTCCATCATGTCAG GTCTCGCAGCAACTTCTTTAAGTTGTCCAGCTGATGTTGTGAAGACTAGAATGATGAATCAGGCAGATAAAAAGGAGGGG AAACTCTTATATAACAGCTCTTATGATTGCCTGGTAAAGACTGTTAAACTTGAAGGAATAAGAGCACTGTGGAAAGGGTT CTTCCCCACATGGGCAAGGCTTGGCCCATGGCAATTTGTGTTCTGGGTTTCGTATGAGAAGTTAAGAAAAGTTGCAGGGC TCTCTTCTTTCTAATATAATTTTTTATTTATACTGTGAGACATTCATTCATGATAAATTTACAATCCACATCTTCCAGAG TACACAACCTTATACTATAATTTGGAAGCCTTTCTGTAGGTATGTTTCCACCAAGTTCTACTTCTTTTCGACATTTTATT TATATTGCTATTATTCCCCTTAAGTTCCACCTCCCACAATGTTTGACATCTTTCACCTCCACCACCATTGGGCATCATTC ACCACCACCATTGCTATTATTCCTAAGTTCCACCTCCACATGATAAGTTCCACTAGTGATGGTTTAGGCTGTCAGGTTGC AATGGAGGTGGAGTTTCGTGTGACGGTGTTGAGCAGTGGTGATGAAGGGTGCTTGGTGATAGTGATTGTAGTGGAAGGTG CCTAGCGGCAAGGGTGTTGTATGCCAATGATGGTTGATGGTGTGCGGCAATGATGGCAGTGGTTGGGATGTCAGGTGGTG GTGCTGGTGGAGGGTATTAAGCAATGGTAGTGGTTGGTGCCTAAAAGTAGTTCTGGTGGTTTGTCATGCGGCAGAGGTGG GTGACATCAGTTTTGGAGGGTACCGAGTGAGATTCTAGTGAAGGGTGTTGAAAGATGGTGAAGGAAGTCAGACGACGATA CCGACAATGGTGGAGGTTGTTGCGTGGTGATGGTGATGGAGGGTGCTCGACTGCGGTAAGAGGTGTCAAGCAGCGGTCGT GGCGATGGTGGAGAGTGACAACGACTTTAGGTGCTTGGCAATGGTGGAGGGCAAAGTGGTGGTAGTGATGGTGGATGATA TTGAGCAGTTGTGGTATGTTGGTCTTGGGTGTATACTAATTGTCTAATTCATTTAGTGGTTACCAAATTCAGAACAAAAA ACATTTTCAGGAGAATAATAAAATGTACCTTGCTTTAATTTTTTAAGGGACTATGTTCTTAAATTACATTTTCACCAAGT TTAGTTTCTTTAAAGAAATTTTTTGGTAGTGCTTATAATTGCAACAAATAATTCAATGAGTCATGTCATGTGCTTTTGTT TAGTCATTTGCCAATGTAGCATTTCCTACTTGTAATCTCAAGAAATAATTCCATTTGGTTGCACGTGCTCCATAAACCTT CGACTTAGAAGATCTTATTTGATATAATCCAATGAACAACACTCCTATAAAACCTGTAAGGGACCTAAATAGGAAGAACT CATCAACAATTCATGTACATGTAGCAAAAGGGACATTATACCCTTCCTTTGATTGTGCTTAATCCAAAGCCCAAACCTG
CDS sequence (LotjaGi5g1v0256700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATCATCAGGCCATCAACATGGTGGAGTTGATAACACTCCCACAAAGCTTGTACTGACATCACTGTCAGCAATGGT AGCTGAGACCACAACTTTCCCCATAGACCTCATCAAGACCAGGCTCCAACTCCACGGCGAGTCGCTTTCCTCGAGTCGTT CTACCGGTGCGTTTCGAATAGGTTTGCACATTGTTCGCGAACAAGGGACCCTTGGCCTTTACAAGGGCCTGTCTCCAGCA ATTGTCAGACACCTACTCTACACGCCTTTTCGGATCGTTGGATATGAGCACCTGAGGAGTGTTGTTTCTGATGATAACGG GTCACTGTTTATCGTTGGCAAGGCTTTTGTTGGTGGAATCTCTGGTAGCTTGGCTCAGATTGTAGCAAGCCCGGCTGATC TTGTCAAGGTGAGGATGCAAGCTGATGGCCGAATGGTGAGCCAAGGTCTTCAACCTCGGTATTCAGGGCTATTTGATGCT TTCAACAAAATTGTTCAAGCTGAAGGGTTACAAGGACTATGGAAGGGTGTTTTTCCTAACATCCAAAGAGCCTTTTTAGT GAATATGGGAGAATTAGCCTGTTATGATCATGCTAAACAAATTGTTATTAAAAGTAAAATAGCTGAGGATAACGTTTATG CCCACACATTAGCTTCCATCATGTCAGGTCTCGCAGCAACTTCTTTAAGTTGTCCAGCTGATGTTGTGAAGACTAGAATG ATGAATCAGGCAGATAAAAAGGAGGGGAAACTCTTATATAACAGCTCTTATGATTGCCTGGTAAAGACTGTTAAACTTGA AGGAATAAGAGCACTGTGGAAAGGGTTCTTCCCCACATGGGCAAGGCTTGGCCCATGGCAATTTGTGTTCTGGGTTTCGT ATGAGAAGTTAAGAAAAGTTGCAGGGCTCTCTTCTTTCTAA
Protein sequence (LotjaGi5g1v0256700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSSGHQHGGVDNTPTKLVLTSLSAMVAETTTFPIDLIKTRLQLHGESLSSSRSTGAFRIGLHIVREQGTLGLYKGLSPA IVRHLLYTPFRIVGYEHLRSVVSDDNGSLFIVGKAFVGGISGSLAQIVASPADLVKVRMQADGRMVSQGLQPRYSGLFDA FNKIVQAEGLQGLWKGVFPNIQRAFLVNMGELACYDHAKQIVIKSKIAEDNVYAHTLASIMSGLAATSLSCPADVVKTRM MNQADKKEGKLLYNSSYDCLVKTVKLEGIRALWKGFFPTWARLGPWQFVFWVSYEKLRKVAGLSSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 12 | 306 | 295 | 1.7E-139 | – | |
PANTHER | 12 | 306 | 295 | 1.7E-139 | – | |
Pfam | 15 | 104 | 90 | 6.3E-19 | ||
Gene3D | 15 | 304 | 290 | 7.2E-89 | ||
ProSiteProfiles | 16 | 101 | 86 | 21.312 | ||
PRINTS | 17 | 30 | 14 | 1.2E-6 | ||
SUPERFAMILY | 17 | 297 | 281 | 3.92E-75 | ||
PRINTS | 30 | 44 | 15 | 1.2E-6 | ||
ProSiteProfiles | 109 | 201 | 93 | 27.018 | ||
Pfam | 111 | 205 | 95 | 1.4E-20 | ||
PRINTS | 124 | 142 | 19 | 1.2E-6 | ||
ProSiteProfiles | 210 | 300 | 91 | 26.224 | ||
Pfam | 211 | 300 | 90 | 3.8E-21 | ||
PRINTS | 219 | 241 | 23 | 1.2E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0256700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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