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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0277400 |
| Transcript ID | LotjaGi5g1v0277400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein IQ-DOMAIN 1; TAIR: AT5G03040.1 IQ-domain 2; Swiss-Prot: sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1; TrEMBL-Plants: tr|G7I9M2|G7I9M2_MEDTR IQ calmodulin-binding motif protein; Found in the gene: LotjaGi5g1v0277400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59262910..59267135) extracted from Lotus japonicus Gifu genome v1.2.
TATTAACGTTAAATTTAGAAGTCACGATCCATATAGGCCCCCCACTCATCCTGACACCAAATCATTGCTGTAATAGTTTC ATTGTTGAACCTTTCTCCTTCCCTCCTTTTCTCCTTTCCTTCTCCTTCACAAGGCTTGTCCTTCTTCATTTGCAGAGATC TCTGATTCTCATGCAAAGGTCTCTTTATTAGAACGTGGAATTCTTCAATTTCACCCCTCTTTCTAATGCTTTTTGTGTCT TCTGATCCATGTTTTTCTAGTTTTCTTATTAGCCAATGTGGATTTGATTTGATTTTTCCTTGAATTATGTAATGTGGGTT CTTCCCCATTTTCCATTGCATTATTAGTACTAGAATAGTTTTCTTTTGGAAATTGGTGTTCAAAACTTGTACCTTTGACT GGTTTTAATGGCATTTTGATTTCTCTTTTCTGAGTTTCTCCTCAATATTTGTTCATTTCATTGCATTGCACAAATGAAAG CCAAAATATTTCATTGCATTGCACAATTTTCAATTCCACCACTCCATGCATGAAATTGCTTTTAACACAACATTTGTTCA TCCCTTTTTGTTGTTCTATTCATATGTTATTTGGCTTGTTATTTGGAATATTCATTGAAAATCTCTTTCTTTTTTCATCA AGATAAAGGAGCTGCACATGGGGAGGAAAGGAAGTTGGTTTTCTTCTGTGAAGAAAGTTTTCATTTCTGATTCCAGAAAA GATCAGGTTTGAATAATCATAATCATAATCATAATAGAAGAACAATCATGTTTTCTTTTGCATCACTGCTCAAGCAATGT TTGTTTTTTTGTTCATGAACAAACAGAAACATCATCATAAATCAAAGTTAGCATGTTTTGGGCACCACCACCAATCTGAG GACCCTGAACGGGCTTCTGAAGGAGCAGTAGTTGCTGTTGTTTGTCCCTCTCTTCCACCTAGAAAAGATGTGAAACCAAA ACCTGATGAGGCAGAGAATGAACAGAGCAAGCAAGCTTTCTCCTTGGTTTTGGCCACTGCGGTTGCCGCGGGGGCTGCAG TTGCTGCTGCTGCAGAGGTTGCTCGTCTCAATAACGCGTCTCGTTACCCTGGAAAAACCAATGAAGAAATAGCAGCTATC AAGATTCAGACTGCATTTCGTGGATATCGGGTATGTACTTGTCATCATATTCATTTGCAGGCAATGCTAGTTACATAAGC CTAATTAATCACACATAAAATGTTCTCCAATACACTTTATAGTTTCATGGTTATCTGCAAAAAAAGAATTGATACTTTCA TATTATATTGGACTTGATTCAAGCAGTAGCTGTAGTACAGGCAGTATTTGCAAAATCATTTGTTTAGATCAGCATTCTTA GAATTGATTTTTGGTAAAACTGGCTATGATTAAAGTGAGGTGATTTATGATTGATAGCATGTTTGTATTGGCTTATCTTT CGTCAAAATCAATTCTGAAATCCAGAAACTACTCACAAAATCTTCTTTACATAATTGGTTCTGATTTTAGAATCAACAGT AAGAGGATTTCCAAACATGCTTAGAGTATATTCATGAGAAAAATAATGAGTAATATTGTAAATCCATTTGTGAAATCCCA CTCAGGGCAGAAGCTAGGATTTCTAGCTTCATCTCAGAATTGACTTTGGACCTAGAACATGTCTGAAATGATACATTCAA ACACCAAAATTTGATTATGATAGTGGGGAACCAATTCTAAGCCTTGCAAACGGAACCAGACATGTTTTAGTTACTTTCAT GTACAATCATGGTTTCAAGTTGTAGTACACAATTACAATTGTGGCTGCAACATTAAGTTTTTTGTATCGCGACCTTAATT GTGGCTGCATCAACCATATTCTTGTGTATGACAGTGATTGTTTTGGGGCTTTCTTTCAGGCAAGAAGATCATTGCGTGCA TTGAGAGGTTTGTCCAGGTTGAAAACATTAGTGCAAGGGCAATCAGTTCAACGGCAAGCAGCTACTACCTTGCAATGCAT GCAAACTCTTTCAAGAGTTCAGACTCAGGTTAATGCACGGAAGATCAGAATGTCCGAGGAGAACCAATCTTTTCAGCGGC AACTTCAGCAGAAACGTGATAAGGAACTTGACAAGTCTCAACCTGCTGTAAGTAAATGATGAGTATTTGACATGCTTCAA TGAGATTTGCATATACAAATTATGACAATTGTTAGTTATTTCTGGTTTTGGTTTCTGTAAGTAATTAATATGAATGTGTC TTCTTAAAGCAAAGACTTAAAATAAATAATGTATGATCAATACTACTTTTTGCAGCGGCCTGTAGAAAAATGGGATGATA GCTCAAAATCAAAGGAGCAAATCAAAGAAAAATTGTTGAACAGGCAAGTGGCTGCTATGAGAAGAGAAAAGGCTTTGGCC TATGCATCAACACATCAGGTAGGAAACTACCTCTTTTATAGATTTTTGTATTTTGGAGTTTAATGGAACAGAGAAAAACA AATTCTGGATTCAGCCTATGCATAAATAAGTTCATTTTGATTGTCCTACTCCTACACCAGTCAATTGGTCATACTTTTAT GTACTTGGTGACAACACATACATGCTATACAATCAGATGAGCTTGTTAATGTCAGGCTAACATGCTACTGTTCCAACCTT GAATTGGGTGGTATTTGAAAGTGTAAAACAAAACATATTAGCTTATACACTAATAAAGGCATTAATGTAGTGTTTTGCTC TAAATCAAAACAGGAAAACATAGTGAAAATGCAAGCATAGACTTGTATTCTATTAGTCTATGCATCTATTTGTTTTGTGC ATGTTGGTAGGACCAATGTTTCTGGTAAACATTAAGATTTCCTGTGGATTCTCATAACTAATTATCCCAAAAGCTTAAAT GATCACCTATCATGTGGTTAGATTCAACTTAGAATAATGAGGACAACAAGAATTAAACTCTAGACTATTTAGTCACAGGG ACTCAGATACTATGTCATAAATCAACTATTTCAAAAGCTTAAGCTATTAGGTGAAGATAAATGAATGGTTTTGTATTTCT AACCTAAGATAACCCATGACATTGTCCAACAGCAAACATGGAGGAACTCTTCAAAATCCACAAATGCCACATTCATGGAT CCAAACAATCCCCACTGGGGCTGGAATTGGCTTGAGAGATGGATGGCTGCAAGGCCATGGGAGGGCCAAACCACCATGAA CCAAAACAATCATGCATCTGGAAAGAGTGCTGCAAGCCACACCATGTCAGTTGGGGAAATCACCAAATTGTACTCTCTCA GAGATCAGAATCAAGAACCTAAGAACTCACCTTCACCTGCTCAAAAAGCAACTCGGCCTCGCGGTCACAATTCCCCTTTA GCTTCAAAGCCCCCATCTAATGGGAAAACAAAGGCATCATCAAGCCCCAAGGTTAATTCATGGGGTGGCAATGGTGACTC AGGAAACATATTCAACAAGAACTCGGAGAGCGTCGACCGGAGGCATAGCATTGCAGGATCTCCAGAGAGAGATGATGAGA GCCTTGCAAGCTCACCAGCACCTCCAACTCACACTACTACAGCAACATCCACAAAGGTTGTTGCAAAGGCCAGGTCCTCC AAAGTGCAACTGCAAAGTCCATCTGGGGTGCTAAGAAACAATGGAACAACAACAACACCTGAAAAGGGAGGTTCTGTTTC TGCAAAGAAGAGGCTTTCTTTCCCAGATTCTCCATCCAATGCAAGAAGGCTTTCTGTTTCAACTAAGGGGGTTTCCAATA AGAATGTTGCTGCCAACACCATCCCTGAATAGAAAGTGAAAGTGGAAAATGGAGAGAGCAGGTAGAGGTGGTGCACAAGT TCCATGTAGAATAGAATTCATGAAAATATATGCCTTTCTATCAACTAACTCATTCTTCAGAAGCCCTGAGGTTGGTGCCA TGGGGAGGAAGGTAGAATAAAAAACTTTGGCTAATCAGTGATCTCATTTTATTCATACAGTTGGCCATGGGGCTGATAAT AGTTTTACGAAAATATATGTCTTTTTCATTTTTTTGATGTAATCTTGTACTTGATTATGGTATTTATATTTGTAATTATC ATTGTAAATTGTTTTCTAGACCATGTTTAGGCCATGATGGTGTTTGATAGATTCCGTTCACTATGTTCAGCACCAATTAG GAAACCGATCCTAACTGATCAAATTAAGAATGTAAGACACATTCCAAGTACTCAGCAAATTTACAC
CDS sequence (LotjaGi5g1v0277400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGGAAAGGAAGTTGGTTTTCTTCTGTGAAGAAAGTTTTCATTTCTGATTCCAGAAAAGATCAGAAACATCATCA TAAATCAAAGTTAGCATGTTTTGGGCACCACCACCAATCTGAGGACCCTGAACGGGCTTCTGAAGGAGCAGTAGTTGCTG TTGTTTGTCCCTCTCTTCCACCTAGAAAAGATGTGAAACCAAAACCTGATGAGGCAGAGAATGAACAGAGCAAGCAAGCT TTCTCCTTGGTTTTGGCCACTGCGGTTGCCGCGGGGGCTGCAGTTGCTGCTGCTGCAGAGGTTGCTCGTCTCAATAACGC GTCTCGTTACCCTGGAAAAACCAATGAAGAAATAGCAGCTATCAAGATTCAGACTGCATTTCGTGGATATCGGGCAAGAA GATCATTGCGTGCATTGAGAGGTTTGTCCAGGTTGAAAACATTAGTGCAAGGGCAATCAGTTCAACGGCAAGCAGCTACT ACCTTGCAATGCATGCAAACTCTTTCAAGAGTTCAGACTCAGGTTAATGCACGGAAGATCAGAATGTCCGAGGAGAACCA ATCTTTTCAGCGGCAACTTCAGCAGAAACGTGATAAGGAACTTGACAAGTCTCAACCTGCTCGGCCTGTAGAAAAATGGG ATGATAGCTCAAAATCAAAGGAGCAAATCAAAGAAAAATTGTTGAACAGGCAAGTGGCTGCTATGAGAAGAGAAAAGGCT TTGGCCTATGCATCAACACATCAGCAAACATGGAGGAACTCTTCAAAATCCACAAATGCCACATTCATGGATCCAAACAA TCCCCACTGGGGCTGGAATTGGCTTGAGAGATGGATGGCTGCAAGGCCATGGGAGGGCCAAACCACCATGAACCAAAACA ATCATGCATCTGGAAAGAGTGCTGCAAGCCACACCATGTCAGTTGGGGAAATCACCAAATTGTACTCTCTCAGAGATCAG AATCAAGAACCTAAGAACTCACCTTCACCTGCTCAAAAAGCAACTCGGCCTCGCGGTCACAATTCCCCTTTAGCTTCAAA GCCCCCATCTAATGGGAAAACAAAGGCATCATCAAGCCCCAAGGTTAATTCATGGGGTGGCAATGGTGACTCAGGAAACA TATTCAACAAGAACTCGGAGAGCGTCGACCGGAGGCATAGCATTGCAGGATCTCCAGAGAGAGATGATGAGAGCCTTGCA AGCTCACCAGCACCTCCAACTCACACTACTACAGCAACATCCACAAAGGTTGTTGCAAAGGCCAGGTCCTCCAAAGTGCA ACTGCAAAGTCCATCTGGGGTGCTAAGAAACAATGGAACAACAACAACACCTGAAAAGGGAGGTTCTGTTTCTGCAAAGA AGAGGCTTTCTTTCCCAGATTCTCCATCCAATGCAAGAAGGCTTTCTGTTTCAACTAAGGGGGTTTCCAATAAGAATGTT GCTGCCAACACCATCCCTGAATAG
Protein sequence (LotjaGi5g1v0277400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRKGSWFSSVKKVFISDSRKDQKHHHKSKLACFGHHHQSEDPERASEGAVVAVVCPSLPPRKDVKPKPDEAENEQSKQA FSLVLATAVAAGAAVAAAAEVARLNNASRYPGKTNEEIAAIKIQTAFRGYRARRSLRALRGLSRLKTLVQGQSVQRQAAT TLQCMQTLSRVQTQVNARKIRMSEENQSFQRQLQQKRDKELDKSQPARPVEKWDDSSKSKEQIKEKLLNRQVAAMRREKA LAYASTHQQTWRNSSKSTNATFMDPNNPHWGWNWLERWMAARPWEGQTTMNQNNHASGKSAASHTMSVGEITKLYSLRDQ NQEPKNSPSPAQKATRPRGHNSPLASKPPSNGKTKASSSPKVNSWGGNGDSGNIFNKNSESVDRRHSIAGSPERDDESLA SSPAPPTHTTTATSTKVVAKARSSKVQLQSPSGVLRNNGTTTTPEKGGSVSAKKRLSFPDSPSNARRLSVSTKGVSNKNV AANTIPE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 481 | 479 | 1.2E-182 | – | |
| PANTHER | 3 | 481 | 479 | 1.2E-182 | – | |
| MobiDBLite | 18 | 48 | 31 | - | – | |
| SMART | 115 | 137 | 23 | 3.1E-4 | ||
| ProSiteProfiles | 116 | 144 | 29 | 10.347 | ||
| Pfam | 119 | 137 | 19 | 5.0E-5 | ||
| Coils | 179 | 199 | 21 | - | – | |
| MobiDBLite | 183 | 222 | 40 | - | – | |
| MobiDBLite | 191 | 222 | 32 | - | – | |
| MobiDBLite | 244 | 265 | 22 | - | – | |
| MobiDBLite | 317 | 336 | 20 | - | – | |
| MobiDBLite | 317 | 487 | 171 | - | – | |
| MobiDBLite | 344 | 378 | 35 | - | – | |
| MobiDBLite | 379 | 393 | 15 | - | – | |
| MobiDBLite | 402 | 448 | 47 | - | – | |
| MobiDBLite | 456 | 487 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0277400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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