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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0079700 |
| Transcript ID | LotjaGi6g1v0079700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trichome birefringence-like protein; TAIR: AT2G40320.1 TRICHOME BIREFRINGENCE-LIKE 33; Swiss-Prot: sp|F4IH21|TBL33_ARATH Protein trichome birefringence-like 33; TrEMBL-Plants: tr|G7J2C5|G7J2C5_MEDTR Trichome birefringence-like protein; Found in the gene: LotjaGi6g1v0079700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:15210468..15219393) extracted from Lotus japonicus Gifu genome v1.2.
AGGGGGACCAAAATCGTGGCATTGGTAAACGTCGGGGACCAAAGTTGCAATTAAGCCTTATTGTTTTTCAACGCCACTAC TCTACCATCATCGGTATAATAAAAAATGAGAAAATGGACAAAACATTCTTTACAATTGGTTACTTTCTACTCAAACTCCC CTAGCGGCTTCTAGTTCTACGCACCAGAACACCAGTTTGGTATTGCTAGCTACCAAACAACCCCACCACAACTAAGGTTA ATTGGGGATCCATGCATATTGCATGTCAATGATGAAACCACCCTTCTCTTCTTCTTCCTCTTCTCTTCTAATGAGAACCA AACCTCGTCTCTCTCCCTCTCTCTTCATCCTCTTAACTTTCATTCTCCTCGCTGTCATCCACTATGGCCACGACTTCATC TTCATCTTCCGCCCACACAACCTTCAAGCCAATTCGGACGCTGCGCTCTTCCCCACACCCGGTGAGTTGACTCAGACCAC CGTGTCAAGGTGCTTTCTTAGCTCTGTTTTTTTGTTGCTGAATTTGGTGAGTTTATCTCAGACTCAGAAACAGAGAGGAG GGAGGAGCAGCAGAAGGTGGAGGAGGATGAAAGGGAGGAGGAGGAGAAATCATCAAGAGGGCACCACTGCGACGTGTTCA GCGGAAGGTGGGTTCGGGACGAGTTGACTCGGCCACTGTACGAGGAATCGGAGTGTCCGTACATACAGCCACAGTTGACT TGTCAACAACACGGCCGGCCCGATGAGGAGTACCGGCGGTGGCGATGGCAGCCTCACGGTTGCGATCTTCCCATGTAAGT GCTTCTCTTTTCTTTTCTTTTTAATTCATAATTTTGTTTTCTACTATATGTTATATTACATTTCTTAGTTTTACTATTGT TTTTGTTCACATATGTGATTTGGGAATATCAACACTATTATCGTTATACTACAAGTGTATTTATCCTCTTCTATTTTCGA TAAAGTTTTCTTTGTTCTTGTCGGCGGGTCGACCCGTCTCCGACACATACAGTCACGTGTGCGACGATGGTGCATTGTTG GATTTTAGTCTTTTATTTCATGTGTATATCCTTGCAAATATATTTCCCCATTAAGTTATGGGAATATAACAATTAATAAG AGAATTATGTAGCTCTACTTCTTAGAGCTGTTCAACTAATTATACTTACTCTAGCTCCCATGGAATGGAAGGAAAAGACA TTCTGTGATAGCAAGAGTCTATTTAATTTGTAGACTCAATCTTTCACCACTATATATCAATATGCAGTTATTGGAACAAT ATAATGCTGATTTCCGTAGTTGTATTCAATGTTCATTATTTGGGAGATTCAACTTTGTCAAAATGTACAAGTTCAAATTT TAGGTGCCCCTCTACTCAGATTGCCTTGCATGCAGTCTATTTGAATCATAAGATAATTAATTTACCGTTTACATGGTCAT TTCATTGATGTTCCTTTAGAAAAAATTTCCCAGCAAAATGCTTTAATTTGTTGTTTATATATAGTATGCTCCATCCTTTT TAATCTCAAACAAATTCCCATAAAATAACTCAGAATTAATTTCACTTGAGTAGATTAGTAATTATGAACTTTTCATAAAA TACTATTAGTAACAACCTAAGAGTCTACATAATCCATCATGTAAAGATACTCGATGGTATTGCCAAAATCATCTTCATGA AAAAAGACAAAGAAACTTCTTCCTATAATCCTATTCTAATCCTGTTTTTTCTACCATAATGATAACGCTTGGTGAAAAGG AAAAGCAAAATAGAAGTAGTGTTATTTTTTTTATTTCTCATTAAAATAACCTTTTAAATTTTTGATACATCTTTATCTGT TTTTGGTTTTTTTTGAAACGATCTGCTTTTGTTAGTCAATTCTTTCTCATGTACTATTTATTTAAATTAAAGATATATAT AGTAAAAAAGTAATTGTTATTTTGAAATTTATAAGTCAATTTAAATAGAAATATATATTTTAAATAGAAATATATATTTT AAATAATTACTAAAATAAAGGAAGAGAGGAAGTATAAATTAATAAATTATAGGCAAAGAGTAGGGGTCTGTTTGTTTGCA ATTTTCAAAACAGTTTTTAGTTTTTTAAAAATGAAAACTTGTTTGTTAAGACCTGTTTTTTTTTTTTTAAAAAAAAGTTC TCATTTTCAGTGTTTAAAACTAAAAAACCAAAATAGCTAAAAAATGTTTTCAGTTTCAGTTTTTAGTTTTCAGATATTAG TTTTCTAAATGTTGGAAAACATGTCATTCAAACTGGTTTTTTTCTTCTAAAAACTGTTTTAAAAAATGAAAACAAACTAC AATCAAACAGGCCCTAGGTGATCCTTTTTCTTGGGACCGTGGTGGCCTTAAGGCTTATTTAGTAATTTTCTCTCTTCACT TTTATGGTTTCACATTGGTGGTCGATTTTTCAATTCTTCTTCTTCCTCATGAACACTATTATTATGGTGAGACCATCACC ACCGCAATGCATCTCCAATTTCCTTTATGAAAACTCTAAAAAGGTTTCACCTTTCAGAATCATCTCTCTAGCTCTTTCTT TTTCTTTGTTCACTTTCACTTCTTTCTCATGAAGTAGAGAAATGGAGCAAAAGAGAGGATATTACGAACTTGTTTGATTG TAGTTTTTGTTTTCAGTTTTTAAAACAGTTTTCAGAAACAATTTTTAAAAACAGTTTTTAGAAAAGTAAAGAGTTTAAAT GACATGTTTTGCAACATTTAGAAAACTAAAAACTGAAACTGAAAATATATTTTAACTGTTTTGGTTTTTTAGTTTTAAAA ACTGAAAATGAGATATGTTTTCAAAAACTGGTACCAAACAGGTTTTCAGTTTTTAAAAAATGAAAACTGTTTTGAAAACA GAAAACAAACATGCCCTACATCTTTTACTATTTTATCTCTAATTTAATCCTAATCACTCATCTAAAAAATATTCCTAGAT TCTAAGATCTAACGGTGCAGAATGTTGGACCACTAGTGATAAAAAAAATCACCCCCAAATTAAAAGCACAAAATTTACAC ATTACAAATGAGCTGAAACACCATGAATGCTGTGGTCATATAAGTCATATCTCACGCCCAATTGAATCAGAAATGAGTAA TTGCTACCAACTACCAACCCAAGCAATGATGGTGCATGACACCTGTAACTTTGTTTTGTAGGACGTTTTGTCTGTGTTTT CCCATTCTTGGGACCTTCGAATTTAGAACATGATAATGTAGTTATGAGCAGATTGAGTATGGCCAGATGCCTTTTTTTTT CTTAATAAGTTTTTTTTTGTACATACACCTTTTTTAGTTTTAGTCCTCACCGGAGCAATGAGAGATCGTCCCTAACCTTT AGGGTATTGATTAGTTTTAGTCCCTCCAACCGGCTTGGTCAATGCTGGAGCCCCGACAGTACCATGTGTATCTGCCACGT CATTTAATGCGCCCACATAGATTTATTTCTTTTTTCATTTAAATTAAAAAACACATAAATAACCTCACTAATTAATCTCT CCCTCACTAAACAAACTGCTTGAACTCAGCCACACCATCACCTTCAAATCCCTTGACCCCTTTCTGTTTCATGTGTGATG TATCAATCTTCCTCCTTTTTTCTCTCCCTATTTCCTTCTTGGTTTGGTTATGGGTGAGCAATTTTGGGTTGGGGTGCGAC ATTAACCGAGGCACAACCAAACAAGGTGGTGGTCTTGCGGAAAGGACGATCTTTTTCACGAAGCAGAGGGCGGTGGTCGT AGCGACGCAACCTCTGACGTCTTCGTTTCACGTCAGGGATGTTGGTCACGCGAATCCCCTTCTCCTTGCACTTGTTCAGG TCAATCTTTTCCACTCCGACACTGAAGCTCGACACGATCTCCAGCTTCAGCAGCGCCTCAATCGGCTCGACGTCGGGCCC CCGCGCTGGCGTTGCCGATGAGGACGCGGATTGAGGAGGCGTGGCTGGTGAGCAGCTAGGCCTTCTGTGGGTAGTCCCAT TCGCAAAACAACTTTTAGTACTTGTCGAGCTCTTGCTCCAGGTAGGGCATTACCTAGCACATGAGGAGTACCCCAATTGA TACCATTTCATGAGGAATTAGGGTTTGAATTTCGAGAGTGAGAATTGCAAAGGAGTCGATTGAGCGTTTGGTCACCGTGT GTGATCACAATTCGGGGGCAGATCGATAGAGGCTCTAAAGCTTGGAGGCAGATATGGCTCTAAGGTTATGCTTTTGGGAT GGTATTGGATCTAGGTTAAATGTGAGAGGACGAGGAAGAGAGCTGGGTGAGGGAAGTGTTTCTGGATCTGGTTCAAAGAA AAAGCATTCCACTTGGATTTGGATGTGGATCTAGATCTAGTTCAAGGATGATGATGAATAATTCATTTTTTTTTTTGGAT TTTTATTGTTGTTGGATGATAAAGATGATGAAACAATGATAAACATGATGGTGATTAAATTTAGTTTTCTGATTGGAGGA TAAAGATGATGAAATAATGTTAAAGATGATGATGAATAAAGATGATGTTATTTACTAATTTAAATATTTGTTTCAGTTTT TTAAATAATTATTAATCTAATTATTAAAAAAATAAAAAATCCACTCGTGTTCATTAGTTGATGTGGCTATGCCACATGGG CAAAAACGGAGTCCGGTGATGACCAACTTGGTCGTAAGGATTAAAAACAATCAATACCCTAAAGGTTAGGGAAGACCTCC CACATTTACTATAGTGAGAGACTAAAACCAAAAGTGGTGTAAAGGTTAGAGACAAAATCTGAGCACAACTGAACATGGTG GTTGTCTTGCGGAAAGGACGATCCTTTTCGCGAAGCAGAGGGCGATGGCTATAGCGACGCAACCTTTGACGTCTTCGTTA CACAGTTTCACGTTAGGGATGTTGGTTGCGCGAATCCCCTTCTCCTTGCATTTGTTCAGGTCAATCTAGTCCACTCCCAC ACTGAAGCTCGACACGATCTCTAGCTTCGGCAGCGCCTCAATCAGTTCGACCTCGGCCCCAGCGCTGGCGTTGCCGATGA GGACGTGGATGGAGGTGGCGTGGTTTGTGAGAAGCTGAGCCTTCTGCGGGTAAATCCCATTCGCAGAACAACTTGTAGCG CTTGTCGAGCTCTTGCTCCAAGTAGGGCATTACCTAGCACACGAGGAGTACCCCAATTGATACCATTTCATGAGGAATTA TGGTTTAGGTTTCGAGAGTGAGAATTGCAAAGGACTTGATTGAGCGTGTGGTCACCATGTGTGATCACAGTTCAAAGGCG AGTCGATGGAGGCTCTAAATCTTGGAGGTATAGATCTGGCTCTAAGGTTATGCTTTCGGGTTGATATTGGATCTGGGTTC AAAGTGAGAGGACGAGGAAGAGAGCTGAGTGAGTGAGGGAAGTGTTTCTGGATCTGGTTCAAAGAAAAAGCATTTCACTT GGAGTTGGATTTGGATCTGGTTCAAGGATGATGATGAATAATTCATTTTTTTTTGGATTTTTATTGTTAATGGATGATAT AGATGATGAAACAATGATAAAGATGATGGTGATTAAATTTAGTTTTCTAGTTGGAGGATAAAGATGATGAAATAATGTTG AAGATGATGATGTATAAAGGTGATGCTGTTTACTAATTCAAATATTAGTTTCAGTGTTTTAAATAATTACTAATCTAATT AATTAAAAAATAAAAAATCCACCCGTGTTCATTAGTTGTTGGGGCCATGCCTAATGCCTAATGGGTAAAAACGGAGCTTC GGTGTTGACCAACCTGGTCGTTGGGACTAAAACCAATCAATACCCTAAAGACGACCTCCTACATTTACTTCAGTGAGAGA CTAAAACCAAAACTGGTGTAAAGGCTAGAGACAAAAACTCAATTAAGCTTTTTTTTTATATATTTTTTGTCGATATATAC ATTTGTTACATTGATTTAATTAATTGGTTGGGTTCTGAGAAAGTCTGAGAATCATAAAGTTTATCAAAAACAAGTGAATG CCAGATGAGGGACATTGGGGACTTTCAATTTTTTGTGTTTCTGTGAGAATGAAAGGGCCCGGGACAGAGAACAACAAAAT TAATTGCTCTTATTCAACTTGCAAGAGTGTATAAAAAAAGAGTTTACTTATCATCTAAAGTTCTATACTTCACAGCTTAG ACAACCCAATCTAGTGAGTGAATTGAAAGCTCAAATTAAGTAACAATAGATTAATTGAATTAAATCAAACATAACACTCC ATTTTACAATGCTACAGATTCAACGCCAGTATGATGCTGGAAACGCTACGTGGGAAGAGGATGATGTTTATTGGAGACTC CCTCAACCGTGGTCAATATGTATCTTTCATATGTCTTATCCATCGACTCATTCCAGAAAATGCCAAATCTATGGAATCTT TTGGTTCACTCACTGTTTTCACAGCCAAGGTGATGTACAAGTCACAACTTCATAACTTTTGCTATATTATTATGGTATTT TACTCTCCTAAAGTGAGAGTTATTTCAGATGGTTAAGTTTTTTTTGAAAGATGGCAAAGTAAGTTCTCATAGACATTGAT GGAAAAATCAATTTAAGTTGTGATTGTGATCACATATGTGCACATATATAACACATTATATGGTTCTTTAAATCTCAACC AGTCATTTCTGAATCAACAGCTATGCATGATAGCTTACTACTTTCGAATTACTTAATTAGTCCCTCATTTTAAAAAAGCC AATTGCATTTGTGTCTGTCATGTTTTTTTTCCCTCTATGTTCATCTTGTTGTATTTAATTAATTAGGAATACAATGCGAC AATTGAGTTCTATTGGGCACCTTTTCTTCTTGAATCAAACTCCGATGATGCAGTGATCCATAGGGTAACTGATAGGATTG TTAGAAAAGGTTCAATAAATAAGCATGGCCGTAATTGGAAAGGAGCTGATATTGTGGTATTCAACACCTATCTTTGGTGG ATTACTGGCTCCAACATGAAGATCTTGTATGTTCCTCCCACTCTATTCCTCTCTCAAATTTTAGTTTTCCCCCAATGCAA TTGCAAAATAATAACTAAACAATTGATTAATTAATCTCTCATCAAATTTTCAGGCTTGGATCTTTTAATGATGAAGTAAA AGAGATTGTTGAGATGTCAACAGAGGATGCATATCGGATGGCTATGAAAAGTATGCTTAGATGGGTGGGTCGGAACATGG ACCCCAACAAGACAAGAGTCTTCTTCACAAGCATGTCACCTTCTCATGCAAAGTGAGTATAATTCACACACAGCAATTTT AATAAAGAAGTTAGCTCTACTTAGTCAAAAAGTTAGGCATCCTCAGGCGAGGAATACTAATTATGATGGAGCTCCTTTCA CAGCTCTGGAGGAATTCCAATAATTTTAATTAACACACTTATCTTAAGAGAAGTGCTACGATGCATGAACGAACTCCTTG AAGGCGAACCAATCTTTTCTTGGATCTAATGGTACAAATGAATTTTTTTTTTAAAATAAGGTGAGGGGATCGATAACATC TTGGAAATGGATACTCACTTATCAAACTTTTTTCATGTTGAAAATTTTGTGACTATCTGTCTCTTTATAAACATGTAAGA GTTTCACGTATAACTAATTAATACATACATATAAAGAGAGCTAGACACAATTTTGAATATGAGGAAACTTGAGAGGATCC TTTCCCATGTTGTCTCAAGGCAAGGCAGGGAAAAATCTCGTGCTCAAAGAACATATAAAGTCAATTTACATTTACTTCAC CCCATAGAGACGAATGAGAGCTCAAAACTACAATTTGTCAGATATCAGACTTTTTCATGCTTCACTTGACCAACCCTTTG GTGTCGAAGTCGTCTATTTTTTGTCTAGCAATAAGTAGTAGTATCATATCTATCTTTATCATTATCTTAATTATTGGTAC ATTAGGATGACATATTTAATACTTGGTATAACTTAAATAACCCCTTATTTATCGAGAGGAGTGCTAGTAATAGACTATTT TAAACGCATTCTTCAACACATTTCATGTGATTGGTTTATGATTGAGTAATGGTTTTTTTTTTTTTTGGAAGTTTGGTATA TGGAAGTACAAATTTAGACAATTATATAGTTCAAGCACATATTTGCAGGAGCATAGAGTGGGGAGGTGAAGTAGGAGGGA ACTGCTACAATGAGACAACTCCAATTGATGATCCAACATATTGGGGCTCTGATTCTCAGAAAAGCATAATGCAAGTGATT GGAGAAGAGTTTAGGAAATCTAAAGTGCCCATAACATTTCTCAACATCACTCAACTCTCCAACTACCGCAAAGATGCACA CACTTCAATCTACAAGAAGCAATGGAACCCTCTGACCCAAGAGCAATTAGCTAACCCTGCTAGCTATGCTGATTGTATCC ATTGGTGTTTACCAGGACTTCAAGATACTTGGAATGAGCTTCTATTTGCCAAGTTGTTTTTTCCTTGAAAGCGTATCCAA AATTGAAGAGATCCTTGTTCTTTTGGGTCTTCTGGTGGCATGGAAACTTGTAAATGGGAAATGGGAAGGTATGACATGGG CGGATAACCCCGTTGTTTTGTTAGAAAGTGAAGAAAGAAAAAAAGAAAGAGGGCTGTACGATGAAAATAGATAACTTTGA AAAGGAGGAAGAGAACAATATACATGACAAAATTTAATAGATTTTATTTTCCAATAATTGGAGTGCCAAATCCAAAATTT TGCTACTTGTGTCATGAAAGGATGAAAATTACCAACAAGGTATTGCTCTAGTAGTAGGTAAATTCGATTTCCGTAATGAT GTTGAAGTAAATCACAAGGACACAAGAAAATGAGGTTGATTTATATATGTAAAAACTTTTTATAGTTGACAACTTCATAA ATCTGTTTTAAAGTTTCTTCTAGCATTGCTTCCTGTTGCAGCCAAC
CDS sequence (LotjaGi6g1v0079700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATCTTGCTTGGATCTTTTAATGATGAAGTAAAAGAGATTGTTGAGATGTCAACAGAGGATGCATATCGGATGGC TATGAAAAGTATGCTTAGATGGGTGGGTCGGAACATGGACCCCAACAAGACAAGAGTCTTCTTCACAAGCATGTCACCTT CTCATGCAAAGAGCATAGAGTGGGGAGGTGAAGTAGGAGGGAACTGCTACAATGAGACAACTCCAATTGATGATCCAACA TATTGGGGCTCTGATTCTCAGAAAAGCATAATGCAAGTGATTGGAGAAGAGTTTAGGAAATCTAAAGTGCCCATAACATT TCTCAACATCACTCAACTCTCCAACTACCGCAAAGATGCACACACTTCAATCTACAAGAAGCAATGGAACCCTCTGACCC AAGAGCAATTAGCTAACCCTGCTAGCTATGCTGATTGTATCCATTGGTGTTTACCAGGACTTCAAGATACTTGGAATGAG CTTCTATTTGCCAAGTTGTTTTTTCCTTGA
Protein sequence (LotjaGi6g1v0079700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKILLGSFNDEVKEIVEMSTEDAYRMAMKSMLRWVGRNMDPNKTRVFFTSMSPSHAKSIEWGGEVGGNCYNETTPIDDPT YWGSDSQKSIMQVIGEEFRKSKVPITFLNITQLSNYRKDAHTSIYKKQWNPLTQEQLANPASYADCIHWCLPGLQDTWNE LLFAKLFFP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 167 | 167 | 7.3E-92 | – | |
| PANTHER | 1 | 167 | 167 | 7.3E-92 | ||
| Pfam | 9 | 164 | 156 | 2.0E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0079700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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