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LotjaGi6g1v0098500.2

Overview

Field Value
Gene ID LotjaGi6g1v0098500
Transcript ID LotjaGi6g1v0098500.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Leucine-rich repeat family protein / protein kinase family protein; TAIR: AT1G67720.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGI2|Y1677_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g67720; TrEMBL-Plants: tr|A0A1J7HPA2|A0A1J7HPA2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0098500
Working Lj name n.a.

We have encountered a general error: No InterPro domain data available

Sequence information

Genomic sequence (LjG1.1_chr6:21314003..21314224) extracted from Lotus japonicus Gifu genome v1.2.

ATGCAATGTGTAGAACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAGTCATTTTGGCTATACAGGATGCTTCTAAGAT TGAAAAAGGGACAGAAAATCAGCTCAAATTATCATCTTCAGGCAGTTCAAAACCCCAATCTTCAAGGAAAACTTTACTTA CAAGCTTTCTTGAGATTGAGAGCCCTGACTTGTCAAATAGTTGCCTCCCATCAGCTAGATAA 

CDS sequence (LotjaGi6g1v0098500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCAATGTGTAGAACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAGTCATTTTGGCTATACAGGATGCTTCTAAGAT TGAAAAAGGGACAGAAAATCAGCTCAAATTATCATCTTCAGGCAGTTCAAAACCCCAATCTTCAAGGAAAACTTTACTTA CAAGCTTTCTTGAGATTGAGAGCCCTGACTTGTCAAATAGTTGCCTCCCATCAGCTAGATAA 

Protein sequence (LotjaGi6g1v0098500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MQCVEQHGASRPRMQEVILAIQDASKIEKGTENQLKLSSSGSSKPQSSRKTLLTSFLEIESPDLSNSCLPSAR 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Unable to find any records for the transcript with the identifer LotjaGi6g1v0098500.2.

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0098500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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