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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0100300 |
| Transcript ID | LotjaGi6g1v0100300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methylthioribose kinase; TAIR: AT4G14200.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|A7FLL0|MTNK_YERP3 Methylthioribose kinase; TrEMBL-Plants: tr|K7L5Y5|K7L5Y5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0100300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:21845640..21849612) extracted from Lotus japonicus Gifu genome v1.2.
CTTAAAAATAATAGAAATAAAATAAAAGCGATGTAAGTCGTTGACCTTGACTTCCATCACTTTTGGATGAAAAATTTAAT AGTAATTAGGATGAACGTCAAAACGTGTGATTTTTGGAGGATTTAAAAAAAGAAATTAAATTACCAAGGGACAAAAAGCA AAAATGAAGTATTTTACTCGGATGAAAAACTTATTTAACCCGAAAGAAATGTTAATAAAATGTGTTTTTAGAAAAACTAA ACAAGGTGAGAAAGGTAAAATAAAAGTTTTTTGAATAAGAAAAGAATTGAAAAGGAGAAAAGGAAAAGAAAAGTCGTTAG CAGAGTGCTGAGGGAGTTTGAAGTTTGAAGTTTGACGCATGCAGTGTGACTCGCAATGGCGACGACGTGTTTCATGGTTC TCACAGTCACGGATGCTACCCCTTGACGCCGTTTCTTACCATCATTCACTTCCCTACTCTGCCAATTTTTTCCCTCTCTT GATTCTTTCCTCTGAGAATTTCTGACTTTGGATTTTCTAGCCTCATTGTTTTAGTTCTTCAGTTTTGATTCACTGCCTTA GATTCTGCCATGGATAACCAAGATTATAGAACAACTCACACTCAAGGTGCTTTTCCTCGTCATTTCTTTTTATTTTTCTT TCTGCCATGGTCACAATCTTGTTTCTCGAGTTGAAGATTTTTATGGTTCTTTCTTGATTTGGCAGGAGACGAGACTCATC ATGTATGTCACAGATGTGGGTGGCCTTTCCCGAATCCACACCCGAGTTCCAAACACAGCCGTGCTCACAAGAAAATTTGT GGAACCATTCAAGGTTTCAAATTGTTAATTTCAGAGTCAGAGACCCAAACTCATTCTAACGCTTCAGATGATGATGATGA TCGCAACACAAACACACAAGGCACGTGCCATTGCTTTTTAAGATTGAATTAATTAATTAGTCTATGAATGATTCACATTA TTAGAATGAGAAAAGATTTCCATTTTTCCCAATGTGATGTTTTTTAGGGTTTGGTTGTGTCAGGTTTAAATGCCTTGGAT ACTAGTAAAATTGATAAAGGTTGTGATGGATCTGGGGGAAGTTTAATTAGATCAGGTGATGAGGTGTTTTTAGATGCAAT TGCAAACTTCTCAGATGGTGGTTTGGACTCAACTTCTGATGTGGTGATAATCAATACAGAATATCCAGAAATTTCAGGGA GTTCTGAGAACAATTGTAAGTTACAAATTGATTAATTGAAATCACTTCATTGGTGTATTTTTATTTATTTTGCGTCATCT GTTAGTACTTGCGAAATGAATATGTTTGGGGAATTAATAATTGAATTTCATCTTTATGATATGCATTTTACGCCATCTGT TAGTACAGTACTTGTATCATTCAATATGCATTTTCTTATGTATCTATGATTTATATTCCATAGGCTAGGTTTTGTTTTTT GTATGGTTTTTTATCATGTTTTGATTATATGTTTTACAGCTGAAGTTGCGAATGATGAGATTGAGATTGACTCAGACGAA GACATGGTTGAGATTGTGGTAGCTTTTGATAACACTTCAGTTGAAACATGTAAGGGAGTTCCTGAATTAGCAGCTAGTGA TCTGGTTAATCTGAAGGATAAGAACTGTGCTGAGTTTATTTCTGTTATTCCACAAGATGAACTTCCTCTTGAAGTAAATT CTACTGTAAGCACTTTCACAAACGGTATTCAGGTAGAGTCTACGCAAATTATACAATTTGCTACTTCTGGTGATGTCAAG ATGTTGCAGCTGGAAAGGGGAGAAGGAAATATGAATATGTTTACACGTTCTTCTTGTGATGATGGATCTGAAATGTCTCA TCCTCAAAATGAGTATGATGATGTTAAAGATCATGAAGCAGAGTTATTACAAAACTCTTTGAGCCTACGTTCATCGGAAG CATTAAAACAAAAGCGAGATGGTTTGAAGGGTTCTGTTTCTGAAGAAAGTCAATCGAGTGAAAAAGGAGAGATTCTTTCT TCAGCTGTGCAAGTTTTGGACGGTAGCATGAAGGGGAAGAACAATTGTAAGCTTTGGGAAGAAGAAATGCGTGCTGAAAA GAGCATTGAAGAACAAGAACCTGATGCTGAAACTAGAGCGTCTATGAGTGCTATGAAAACTGAGATGAATGAGAGCTATA TCATTCACTATCGTGAGGAAGAAGAATCTGATGCTGCTCGTAGAAATTTACAACAGATAAATTTACCAAACAGCAGTTTC ATTGCCGTATCAAAAGAGAAGAATCCCAGTTGTGCATCCTTTGTTGGTTCAACTAATGAAACACCTGGTCCAATTAGCAC AGTTAATGTAAGTCATCATGAGAAAAACATGAAGAACATGAATGAAGTAGCTGTGGATGGCAAGTGCACAGGAGCTAATG TTGAAAATGATAACGGAATAATCAGGATCAAAACTCTTCAAAGCAGTGAACTGCATTTCGAAGCTGAGTCAACAAGTGGT GGAATATATTGGAGTGATGATGCTTTTGAAATGGGTAGAATTGAAAAATGTGACATAACTGATGGTCAATGTATGGAAAG GCCCCTTGTGAAAGACATCAAAGATGATGAAATCAATAGTGGTGGCAGGGGAACTATAGAATGTGAAAGGTATATTGGTT CTTCAGTTGATGATTCATGCCAAGCACAAGATGAAGAATTATTACTGAACGCTACAGAACACCTTGGTAGAAACTATTCA TCAAATTCTTCTTTAAATAACTTGAACCCATTTTTTTGCCGACAACATTGATTTGATATACTTTTTGTTTTGGTTAGATC AAACAGTTGCCTCCACACAATCTGATATTGTAAAAGCTGTTATTGATGCCGAAGATTTACCATCAACAGAAGTAGGGAGA TCCAACTCAAAGGCTGCATTGGAGAGACATCACTGTGAAAATCCAGAAATGTTTGAGCCGCCATCTTTCATGACATTGGT TGAACCTGGACATAGGGTTGGTCCAGAAGCTCCTGCATCTGAAGTCCAACAACTTCCCAGTTGTACCTCTTTGCAAGCTG GTTGGTTTCCCACTATAACTACGGTTACTAATGAGTCTCGAGGGAGAAAAAGGAATGAAGAAACAATAGCCAAGATAACA AACGGAAGCACCAGTAAGCTGCTGAAACCTCTCAAGAGTCTATCAAGTGAAGCTTCCCATGACAAGAAACCCAAGTCTCC GAAATTGGAAGAAACTTCAGTGAATCAGAATAAAAGTGAAGTTCGAGGAAATAATGGTTCTGGTTCTGGTCTTAAATCAC CTGCCACTCAAGCTGTGGAAGGAGAAGGTGTAAAAGAGTGGAGCTCCCCAGGACGAAACCCTGCAGGCAATAAGACACAA AGTAAGAAAGTAAAGAGCAGACCATATTGGTTACAATTTGTATGCTGCTCTTCTGACACTGCTTCTCAGCGAAGAGGGTA GAAGATTGCTAGCTAAGTTGTGGTGATAATACCTCGTTGCTCTTCCCTCTACACTGCTTCTTGACGTGCTGTTTTGCTAT TATCTTTTCTTAGTTAATCTGCCATGGACTTAGGAATACATATTTCATCATTTGTTTTATCTTGGTCTTTTGTTAATCCT ACACCCTCTTTTGATACGGACACAAAAGCTTTGTTCACTCTTCTGTGTTTAGAGATTAGACCGTTCAACCCCCGTCCTCA CCTTTGTAGCAAGTAGATTCATGAGCTGTTATTGCCCATGAATCCGCTAAACAACTTTTATTTCAAGGGAAACCCCATGA ATCAAGCAGACCTAATGTCCAAAACATGATTTTTGGGAAGCAAATGATCTCAAGGTTGGATAAACTCAGGCTTGCTCGGT ATGAGTTTAGGTAGTCAAATAGATTTCCTTGAAGATTGGTTTGCATGTGCTAGCTAAATGTAGATTCAGTGAAAATAGAC AAAAAAAATCAGGGCATTGGCACTTTTTCTTAGTACATTGAGGAGACAGCCAA
CDS sequence (LotjaGi6g1v0100300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGAGATTGTGGTAGCTTTTGATAACACTTCAGTTGAAACATGTAAGGGAGTTCCTGAATTAGCAGCTAGTGATCT GGTTAATCTGAAGGATAAGAACTGTGCTGAGTTTATTTCTGTTATTCCACAAGATGAACTTCCTCTTGAAGTAAATTCTA CTGTAAGCACTTTCACAAACGGTATTCAGGTAGAGTCTACGCAAATTATACAATTTGCTACTTCTGGTGATGTCAAGATG TTGCAGCTGGAAAGGGGAGAAGGAAATATGAATATGTTTACACGTTCTTCTTGTGATGATGGATCTGAAATGTCTCATCC TCAAAATGAGTATGATGATGTTAAAGATCATGAAGCAGAGTTATTACAAAACTCTTTGAGCCTACGTTCATCGGAAGCAT TAAAACAAAAGCGAGATGGTTTGAAGGGTTCTGTTTCTGAAGAAAGTCAATCGAGTGAAAAAGGAGAGATTCTTTCTTCA GCTGTGCAAGTTTTGGACGGTAGCATGAAGGGGAAGAACAATTGTAAGCTTTGGGAAGAAGAAATGCGTGCTGAAAAGAG CATTGAAGAACAAGAACCTGATGCTGAAACTAGAGCGTCTATGAGTGCTATGAAAACTGAGATGAATGAGAGCTATATCA TTCACTATCGTGAGGAAGAAGAATCTGATGCTGCTCGTAGAAATTTACAACAGATAAATTTACCAAACAGCAGTTTCATT GCCGTATCAAAAGAGAAGAATCCCAGTTGTGCATCCTTTGTTGGTTCAACTAATGAAACACCTGGTCCAATTAGCACAGT TAATGTAAGTCATCATGAGAAAAACATGAAGAACATGAATGAAGTAGCTGTGGATGGCAAGTGCACAGGAGCTAATGTTG AAAATGATAACGGAATAATCAGGATCAAAACTCTTCAAAGCAGTGAACTGCATTTCGAAGCTGAGTCAACAAGTGGTGGA ATATATTGGAGTGATGATGCTTTTGAAATGGGTAGAATTGAAAAATGTGACATAACTGATGGTCAATGTATGGAAAGGCC CCTTGTGAAAGACATCAAAGATGATGAAATCAATAGTGGTGGCAGGGGAACTATAGAATGTGAAAGGTATATTGGTTCTT CAGTTGATGATTCATGCCAAGCACAAGATGAAGAATTATTACTGAACGCTACAGAACACCTTGATCAAACAGTTGCCTCC ACACAATCTGATATTGTAAAAGCTGTTATTGATGCCGAAGATTTACCATCAACAGAAGTAGGGAGATCCAACTCAAAGGC TGCATTGGAGAGACATCACTGTGAAAATCCAGAAATGTTTGAGCCGCCATCTTTCATGACATTGGTTGAACCTGGACATA GGGTTGGTCCAGAAGCTCCTGCATCTGAAGTCCAACAACTTCCCAGTTGTACCTCTTTGCAAGCTGGTTGGTTTCCCACT ATAACTACGGTTACTAATGAGTCTCGAGGGAGAAAAAGGAATGAAGAAACAATAGCCAAGATAACAAACGGAAGCACCAG TAAGCTGCTGAAACCTCTCAAGAGTCTATCAAGTGAAGCTTCCCATGACAAGAAACCCAAGTCTCCGAAATTGGAAGAAA CTTCAGTGAATCAGAATAAAAGTGAAGTTCGAGGAAATAATGGTTCTGGTTCTGGTCTTAAATCACCTGCCACTCAAGCT GTGGAAGGAGAAGGTGTAAAAGAGTGGAGCTCCCCAGGACGAAACCCTGCAGGCAATAAGACACAAAGTAAGAAAGTAAA GAGCAGACCATATTGGTTACAATTTGTATGCTGCTCTTCTGACACTGCTTCTCAGCGAAGAGGGTAG
Protein sequence (LotjaGi6g1v0100300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVEIVVAFDNTSVETCKGVPELAASDLVNLKDKNCAEFISVIPQDELPLEVNSTVSTFTNGIQVESTQIIQFATSGDVKM LQLERGEGNMNMFTRSSCDDGSEMSHPQNEYDDVKDHEAELLQNSLSLRSSEALKQKRDGLKGSVSEESQSSEKGEILSS AVQVLDGSMKGKNNCKLWEEEMRAEKSIEEQEPDAETRASMSAMKTEMNESYIIHYREEEESDAARRNLQQINLPNSSFI AVSKEKNPSCASFVGSTNETPGPISTVNVSHHEKNMKNMNEVAVDGKCTGANVENDNGIIRIKTLQSSELHFEAESTSGG IYWSDDAFEMGRIEKCDITDGQCMERPLVKDIKDDEINSGGRGTIECERYIGSSVDDSCQAQDEELLLNATEHLDQTVAS TQSDIVKAVIDAEDLPSTEVGRSNSKAALERHHCENPEMFEPPSFMTLVEPGHRVGPEAPASEVQQLPSCTSLQAGWFPT ITTVTNESRGRKRNEETIAKITNGSTSKLLKPLKSLSSEASHDKKPKSPKLEETSVNQNKSEVRGNNGSGSGLKSPATQA VEGEGVKEWSSPGRNPAGNKTQSKKVKSRPYWLQFVCCSSDTASQRRG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 32 | 412 | 381 | 7.7E-76 | – | |
| PANTHER | 32 | 412 | 381 | 7.7E-76 | – | |
| MobiDBLite | 133 | 157 | 25 | - | – | |
| PANTHER | 392 | 600 | 209 | 7.7E-76 | – | |
| PANTHER | 392 | 600 | 209 | 7.7E-76 | – | |
| MobiDBLite | 484 | 588 | 105 | - | – | |
| MobiDBLite | 499 | 514 | 16 | - | – | |
| MobiDBLite | 517 | 531 | 15 | - | – | |
| MobiDBLite | 532 | 556 | 25 | - | – | |
| MobiDBLite | 574 | 588 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0100300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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