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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0169100 |
| Transcript ID | LotjaGi6g1v0169100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein MEI2-like 2; TAIR: AT1G29400.1 MEI2-like protein 5; Swiss-Prot: sp|Q6ZI17|OML2_ORYSJ Protein MEI2-like 2; TrEMBL-Plants: tr|A0A0B2QDK2|A0A0B2QDK2_GLYSO Protein MEI2-like 2; Found in the gene: LotjaGi6g1v0169100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45457323..45463096) extracted from Lotus japonicus Gifu genome v1.2.
AGAGAGAGACATAGACAGAAAACTGTGACGTACCTTTATTTGATTGTATCTGTTAGAGTAACTGATATCAATGAATCTGA CCCCTTTTTTTTTTTTTGAATTTCACATTATCAGTAGAAAGTAAATGAATATGGACAAACTTCCTGGGGACTCTCTGCCA GCTCATGGTCCAATAAAAGTTGGAAGCAGTGCATGGGGAATACCACATACAGCTAATGTATTGCATGATTCAAGTGATGT TAGCTTGTTTTCCAGTTCACTGCCTGTTCTTCCGCATGGAAAATGTAAGCTTGAGATGATGTTACTGATAGAACATATTA GAATCAGCAAGTATTAGATTATTGAATATTGAGTCTTTTTCCTTTTTGTTGTTGATCTGCAGTAGTGAATTCGACTGACT CTGAAGATTATGGTCGACCTGTTGATGATAGCTTGCTGACATTAGATAAAGATCACAAAGAGGAAGAGGGGCAAGGTCCT TTTGATGATATGGAAACCAATGCAATTGGAAACCTGCTTCCGGATGATGAAGATGAGCTTTTAGCTGGGATAATGGATGA TTTTGACCTTACTAGGTTACCCATTCAATTGGAGGATTTGGATGAAAATGATCTGTTTGCCAATGGTGGGGGATTTGAAA TGGACTTTGAACCACAAGACAGCCTTAGTATTGGTCTGTCAAAGATAAGCATATCAGATGGACTTGCTTCGAGTGGTATT GCACAGTATGCAATCCCGAATGGGATGGGAGCGGTGGCCGGGGAGCATCCTTATGGAGAGCATCCGTCAAGGACACTATT TGTTCGAAACATCAACAGTAATGTTGAGGACTCTGAACTAAGAATACTATTTGAGGTACTGTACATTAGCCTGATGCTTC AACAGTAATATATTTATCTTTAAAGAGTATTTAATTAGTTATGGTAATCATGCTTTTGCTTCTTTTGTTACTAAACTAAA TCTATGGAAACTCACTAATTGAGGTATTGTACATTTGGCCATCAGCCTACTTGTGATACCTCTAATGTAGTAATTCATCC ATTTCTATTTTGTGATACTTATTATAATGCCTTGAAGTCTATTGATATTTGCATTTTAGAATCAGGAAATTATGGATGAT GAGTTGTGGTTTCGTCTTTGACTGGAAAATTGCTTGGGATATTGTACCTTCCAAATCCCAACTATTATTAGTAGAAATGT CTCTGTCAAGATAAATTATTACCTATCCTGCAATTTCTAGTTAGGAACTGGAGGATACTGCCCTTTATCACATATTCTCT TACTGATAAAGATCGAACCAATACATACATGGCTATTGCAGAATGAAATAGAATAGAGTGAAATATAACGTTGTGAACAT ACAAAGGACCATGCTATCTGGTCTTGGCAAGTTAGTAACAGGAGACTTGACTTACAGTTTTTCCCTGATCAATCCTGCTG GGACTCAGTTGTCCCCTTTAGACTTCAAGTGCTCCCTCTCTCCCTCGTCTCCTACCTCTAAAGTTCTACTTGTCCGAAAA ATAGATTAGTTTAGTTGGAAATCCCTGAGCTGCACTAATTTTTTCTAATTTAGTGACTCTGAGCTTGTGTCTAGTACAGT TGGCATGAACAAATTCTAGTCGGAGCTTAAATAGTTTGTTTTGGATATGCATTTCTTATTTGGCTAACACTTGAAAAGTT CTTGTTTTTCTCCCTTTATTTTGTCATTCTTATTATTGATTCCTTCATGCTCATTTGACAGCAATATGGGGATATCAGAA CGTTGTACACAGCATGCAAGCATAGGGGCTTTGTGATGATATCTTACTATGACATTCGAGCTGCTCGTACTGCAATGCGC GCTTTACAAAACAAACCTTTGAGACGAAGAAAACTTGATATTCATTTTTCAATTCCCAAGGTTTGATTTTCTGGCAATAC CTAATGTTTGTCTTATTATGATTGGTATTGCCTTTGTGTTATTGATCTTTGTTCTGCTGGTTCCAGGATAACCCCTCGGA AAAAGATATAAACCAAGGAACCCTTGTAGTGTTCAATTTGGATCCATCAGTATCAAATGATGACCTTCGTCAAATATTTG GGGCTTATGGTGAGGTCAAGGAGGTAATTTATGCTTATCTATTCATCTCTAATGTATTTTCTTTGGTCTTCGCCTAATTT TCATCTAATGCTTGAAGTAATTCTAAATTTTGCATTAAAATTGCAGATCAGGGAAACACCACATAAGAGGCACCACAAAT TTATTGAGTTTTATGATGTTAGAGCAGCAGAGGCAGCTCTTAAAGCATTAAATCGAAGTGACATTGCCGGGAAACGCATA AAACTTGAACCCAGTCGCCCTGGTGGAGCACGTAGAAAGTAAGTTGGGTTTTATATTGGTTTGGATGGTATGGTCATTTT TCCGATAAAAATTTATTTTCTTCGTTGACCTGGTTTCTTAATTCTTTCATGCACGATAGAAATGTATCGCATACATGGAA GTTTTATCAATAGATGTACACTCATGAATATCTATTATATTAATATTTATCCCTAGACCAGATATCGAGTTTGTTGAATG CAAGTTGCTCATAAATAAGTTAATTTTAGTTGCTTTCATGACGAAAAGAAATCTGGTTGGTTTCGGAAAGTTCAAGTTAG TAATGAGGTTTTTATTAACCATAAAATTTTAAATTAACTTCTGAGATAAGCTTGCATCACTTTATTAGGATCTAAAGGAA TCTTCCAAATTTTGTCCTGTCATCCAATCTCTTATGACTTTCATCTCTCATACCATTTTCATTTCATCTGCATGCTAAAA TGCAGTAATATATTGAGATGTTATAGTTGACGCTGGAGTAACACTAATTAGCTACTACCGTAGGCAGTCTGTATGCTTCT GAATCTATACAAATATAAAATGGGGGTGTAGAAAAAAATAAATGTTAAGAAATAGCATTATTACAGGCATGACTCCATTC ATAGTGTTGCTTAAATGTATTGAAATGTAATGCACTGGCTGGATGAAGTAGGTTCTGTGCACCCCACCCCAACTTTTGGA GAAACCATTGCTTCATGTCATGGCTCCTCCTTTTAGTAGTTGTGCACAGAATGCATATAATTATTATTTACCGATTACTT TTATGAGTTTATCTTTGCATTCATGTCGACTACTGACATTTTGATCTTTCTATATCTTGTTTGTGTTTTTGTTTTTCTCA TTTTAGCATTATTTTTCTTTACTATGATTTAGGAAACCTCATACATATTACAATGCTATTGTCTACATAATTAAATATAT AAAGATTGTGCTGTATTTTCTATTGTTAGCTTGATGCAACAACTGAGTCAAGAACTGGAACAAGATGAAACTCGCACTTT TAGGCATCAAGTAGGTTCACCTCTGGCCAATTCTCCTCCTGGTAAATATTTTTAATCCAATCTTCATTCTTATTTTATAT CATTGTTGAATGATACCTTAAGTTACAATCTTAAGATTTGGGCAATTTTTTCTTTTTTCAGGTAACTGGGCACATTTTGG TAGTCCAATTGAACCTAATCCATTAGGCTCTTTTAGCAAGTCTCCTGGTTTGGGTCATGCAAGCCCTATGAGTACCAACC ATTTGTCAGGATTGGCTGCTCTTCTTTCCCCACATACATCAAGCCCTACCAAGGTTGCACCCATTGGGAAGGACCCTCGA AGGGTTACACATCAGTTGTTCGCTAACTCTGGATCAACACTAGGAGCAGCTTTTCAGCATTCTATGTCATTTCCCGAGCA AAAAGTAAATGCAACTCCTAGACCTACATCTACGTTTGGTGAATCACATTCAAGTTCATCAAGTATTGGAACACTGTCTG GTCCTCAATTTCTTTGGGGAAGCCCGACTCCGTATTCGGAGCATCCAAAGACATCTGCCTGGTCTTCTTCTTCTCTGGGA CATCCATTTACATCTAGTGACCGAAGGCAGGGATTCCCATATACTAGTCATCACAGTCCTTTTCTTGGCTCCCAGCAACA TCATCAGGTAGGGTCTGCTCCATCTGGCCTTCCTCTTGATAGGCATTTTAGCTACTTCCCGGAGTCACCTGATGCTTCTC TCATGAGCCCCGTTGGTTTTGGGAATTTAAACCACGGTGATGGGAATTTTATGGTGAACATGGGTGCTCGTGCATCTGTT GGAGTTAGTGTTGGCCTTTCAGGAACTAATACTGAAATTATTTCACCTAATTTCCGAATGATGTCACCACTGCCTAGGCA TGGTTCATTGTTCCTTGGGAATGGTTCCTATACTGGACCAGGAGCAACTACTATTGAGGGGTTGGCTGAACGTGCACGAA GTAGACGTCCTGACAATAATGGGAATCAAATGGATAGTAAGAAGCTGTATCAGCTTGATCTAGAAAAAATCATCAGCGGT GAAGATACAAGGACTACTTTAATGATTAAAAACATTCCTAACAAGTATGAACAACTAAACAACTATCCTTGTGAAGTGAT CTATATCTTGGCAATTTGATTAGGATGTTAACTGATGAATTTCTTGATGACTTTTGCCTGTTTTGTTTGCTTTTAAGGTA CACTTCAAAGATGCTGCTTGCTGCTATTGATGAGAATCACTGCGGGACTTATGACTTCGTCTACTTGCCAATTGACTTTA AGGCATAAATAAAGCATTCTATATATCTTTTTAATCAATGTTGAAAGATTTCTGCTGCATGGATGAGTTATTTCTTAATG CCTGTTTTTGCTTGCAGAACAAGTGTAATGTGGGTTATGCTTTCATCAATATGGTGTCTCCTTCACACATCGTCCCCTTC TTTAAGGTTTAAATTCTATCCATTTATATTGTCTGATGTCATGGTTTTCTGTTACTATATTTAAATTCTCATTTGCATAG TCTGTGATGTGAGGAGTTCCTAAATGTTGACGCTGTATCATCATGATAGATTATTCTGATATATTTTGGCTTCTATATAT GACTTGAAGGTGCTAGAAAGTATGTTCTATGATAGTTTCTGGTGATTTGCTAGCATTAAACTTGTCAGGTAAGGAGAAGT GTGTTGTATACTTAATTTTAACTAGTCTATAATGGAAACTTGTCTAGGCATTTAATGGGAAGAAATGGGAGAAATTTAAT AGTGAAAAAGTTGCTTCGCTAGCATATGCACGGATACAAGGAAAGGCTGCGCTTGTGATGCATTTTCAGAACTCAAGCTT AATGAATGAGGACAAGCGGTGCCGACCTATTCTCTTTCATTCAGAGGGCCAAGGTACTGGTGACCAGGTAATATTTGATT CAGTTGCTCACAATTACAAGATTTCTGGCGTGAGACATTGTTACAGTTTCTCCTTTAACATTTAGTTACAAAGAACTGTA GTATAAAAATTCTAGTATTGTACTAATAATTGATTACACTTCCTAAAAGTTCCTATTCTCAAGGGTTGGAAGACCTGAGC ATTCAGTTTATTCATATGTAGAACTCAAATTAAGTTGGTTAAATATTTTCGAAGTTGCTTTTGAAGATTGCTTGATTTTG AGATCACATATAAGCTTTCAGTTTTTCAATTGCAACATGAAACTGCTAATTTCTTTGACTGTACCTTTTAAGTAAATGCT ACAGTAATTTATCAAATTAGTTCCTTTAACATTTCATTTTCTCTGATTTCCATTTAGGAACATCTTCTGTCCAGCAATTT GAATATCTGCATTCGTCAACCGGATGGGTCGTACACAGGTGATTTGTTGGAGAGCCCAAAGGGCAATTTGGATGAGAAGC TAGAGAAAGATTAA
CDS sequence (LotjaGi6g1v0169100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATATGGACAAACTTCCTGGGGACTCTCTGCCAGCTCATGGTCCAATAAAAGTTGGAAGCAGTGCATGGGGAATACC ACATACAGCTAATGTATTGCATGATTCAAGTGATGTTAGCTTGTTTTCCAGTTCACTGCCTGTTCTTCCGCATGGAAAAT TAGTGAATTCGACTGACTCTGAAGATTATGGTCGACCTGTTGATGATAGCTTGCTGACATTAGATAAAGATCACAAAGAG GAAGAGGGGCAAGGTCCTTTTGATGATATGGAAACCAATGCAATTGGAAACCTGCTTCCGGATGATGAAGATGAGCTTTT AGCTGGGATAATGGATGATTTTGACCTTACTAGGTTACCCATTCAATTGGAGGATTTGGATGAAAATGATCTGTTTGCCA ATGGTGGGGGATTTGAAATGGACTTTGAACCACAAGACAGCCTTAGTATTGGTCTGTCAAAGATAAGCATATCAGATGGA CTTGCTTCGAGTGGTATTGCACAGTATGCAATCCCGAATGGGATGGGAGCGGTGGCCGGGGAGCATCCTTATGGAGAGCA TCCGTCAAGGACACTATTTGTTCGAAACATCAACAGTAATGTTGAGGACTCTGAACTAAGAATACTATTTGAGCAATATG GGGATATCAGAACGTTGTACACAGCATGCAAGCATAGGGGCTTTGTGATGATATCTTACTATGACATTCGAGCTGCTCGT ACTGCAATGCGCGCTTTACAAAACAAACCTTTGAGACGAAGAAAACTTGATATTCATTTTTCAATTCCCAAGGATAACCC CTCGGAAAAAGATATAAACCAAGGAACCCTTGTAGTGTTCAATTTGGATCCATCAGTATCAAATGATGACCTTCGTCAAA TATTTGGGGCTTATGGTGAGGTCAAGGAGATCAGGGAAACACCACATAAGAGGCACCACAAATTTATTGAGTTTTATGAT GTTAGAGCAGCAGAGGCAGCTCTTAAAGCATTAAATCGAAGTGACATTGCCGGGAAACGCATAAAACTTGAACCCAGTCG CCCTGGTGGAGCACGTAGAAACTTGATGCAACAACTGAGTCAAGAACTGGAACAAGATGAAACTCGCACTTTTAGGCATC AAGTAGGTTCACCTCTGGCCAATTCTCCTCCTGGTAACTGGGCACATTTTGGTAGTCCAATTGAACCTAATCCATTAGGC TCTTTTAGCAAGTCTCCTGGTTTGGGTCATGCAAGCCCTATGAGTACCAACCATTTGTCAGGATTGGCTGCTCTTCTTTC CCCACATACATCAAGCCCTACCAAGGTTGCACCCATTGGGAAGGACCCTCGAAGGGTTACACATCAGTTGTTCGCTAACT CTGGATCAACACTAGGAGCAGCTTTTCAGCATTCTATGTCATTTCCCGAGCAAAAAGTAAATGCAACTCCTAGACCTACA TCTACGTTTGGTGAATCACATTCAAGTTCATCAAGTATTGGAACACTGTCTGGTCCTCAATTTCTTTGGGGAAGCCCGAC TCCGTATTCGGAGCATCCAAAGACATCTGCCTGGTCTTCTTCTTCTCTGGGACATCCATTTACATCTAGTGACCGAAGGC AGGGATTCCCATATACTAGTCATCACAGTCCTTTTCTTGGCTCCCAGCAACATCATCAGGTAGGGTCTGCTCCATCTGGC CTTCCTCTTGATAGGCATTTTAGCTACTTCCCGGAGTCACCTGATGCTTCTCTCATGAGCCCCGTTGGTTTTGGGAATTT AAACCACGGTGATGGGAATTTTATGGTGAACATGGGTGCTCGTGCATCTGTTGGAGTTAGTGTTGGCCTTTCAGGAACTA ATACTGAAATTATTTCACCTAATTTCCGAATGATGTCACCACTGCCTAGGCATGGTTCATTGTTCCTTGGGAATGGTTCC TATACTGGACCAGGAGCAACTACTATTGAGGGGTTGGCTGAACGTGCACGAAGTAGACGTCCTGACAATAATGGGAATCA AATGGATAGTAAGAAGCTGTATCAGCTTGATCTAGAAAAAATCATCAGCGGTGAAGATACAAGGACTACTTTAATGATTA AAAACATTCCTAACAAGTACACTTCAAAGATGCTGCTTGCTGCTATTGATGAGAATCACTGCGGGACTTATGACTTCGTC TACTTGCCAATTGACTTTAAGAACAAGTGTAATGTGGGTTATGCTTTCATCAATATGGTGTCTCCTTCACACATCGTCCC CTTCTTTAAGGCATTTAATGGGAAGAAATGGGAGAAATTTAATAGTGAAAAAGTTGCTTCGCTAGCATATGCACGGATAC AAGGAAAGGCTGCGCTTGTGATGCATTTTCAGAACTCAAGCTTAATGAATGAGGACAAGCGGTGCCGACCTATTCTCTTT CATTCAGAGGGCCAAGGTACTGGTGACCAGGAACATCTTCTGTCCAGCAATTTGAATATCTGCATTCGTCAACCGGATGG GTCGTACACAGGTGATTTGTTGGAGAGCCCAAAGGGCAATTTGGATGAGAAGCTAGAGAAAGATTAA
Protein sequence (LotjaGi6g1v0169100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNMDKLPGDSLPAHGPIKVGSSAWGIPHTANVLHDSSDVSLFSSSLPVLPHGKLVNSTDSEDYGRPVDDSLLTLDKDHKE EEGQGPFDDMETNAIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQDSLSIGLSKISISDG LASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRILFEQYGDIRTLYTACKHRGFVMISYYDIRAAR TAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYD VRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGNWAHFGSPIEPNPLG SFSKSPGLGHASPMSTNHLSGLAALLSPHTSSPTKVAPIGKDPRRVTHQLFANSGSTLGAAFQHSMSFPEQKVNATPRPT STFGESHSSSSSIGTLSGPQFLWGSPTPYSEHPKTSAWSSSSLGHPFTSSDRRQGFPYTSHHSPFLGSQQHHQVGSAPSG LPLDRHFSYFPESPDASLMSPVGFGNLNHGDGNFMVNMGARASVGVSVGLSGTNTEIISPNFRMMSPLPRHGSLFLGNGS YTGPGATTIEGLAERARSRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHCGTYDFV YLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILF HSEGQGTGDQEHLLSSNLNICIRQPDGSYTGDLLESPKGNLDEKLEKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 21 | 823 | 803 | 0.0 | – | |
| PANTHER | 21 | 823 | 803 | 0.0 | – | |
| Gene3D | 182 | 270 | 89 | 2.5E-17 | ||
| SUPERFAMILY | 187 | 350 | 164 | 2.03E-32 | ||
| CDD | 189 | 265 | 77 | 1.98496E-51 | ||
| ProSiteProfiles | 190 | 263 | 74 | 13.891 | ||
| SMART | 191 | 259 | 69 | 8.0E-12 | ||
| Pfam | 192 | 256 | 65 | 3.6E-10 | ||
| Gene3D | 271 | 366 | 96 | 5.6E-18 | ||
| CDD | 274 | 344 | 71 | 7.10799E-46 | – | |
| ProSiteProfiles | 275 | 348 | 74 | 14.999 | ||
| SMART | 276 | 344 | 69 | 6.1E-15 | ||
| Pfam | 277 | 342 | 66 | 2.0E-12 | ||
| MobiDBLite | 472 | 497 | 26 | - | – | |
| MobiDBLite | 513 | 560 | 48 | - | – | |
| MobiDBLite | 513 | 556 | 44 | - | – | |
| Gene3D | 680 | 771 | 92 | 1.4E-5 | ||
| Pfam | 688 | 784 | 97 | 3.8E-54 | ||
| SMART | 690 | 766 | 77 | 0.071 | ||
| SUPERFAMILY | 690 | 775 | 86 | 4.03E-16 | ||
| CDD | 691 | 776 | 86 | 4.39007E-63 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi6g1v0169100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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