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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0290300 |
| Transcript ID | LotjaGi6g1v0290300.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Malonyl-CoA decarboxylase; TAIR: AT4G04320.1 malonyl-CoA decarboxylase family protein; Swiss-Prot: sp|O95822|DCMC_HUMAN Malonyl-CoA decarboxylase, mitochondrial; TrEMBL-Plants: tr|A0A151T6Q6|A0A151T6Q6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0290300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:60763795..60768130) extracted from Lotus japonicus Gifu genome v1.2.
ATGAACAAGAAGAAAGCTCTCTCCATTTTGTTGCGCGCCAGAATGAAGCCTAACGATCGCACCAACCTTCCTCTCACTGT AAGCAACCTATCTCGCCATTACTGTCATTCATACACTTACTTCGCTTTGCTTTGCTTCATTTTCACGCAAATCGATGATT CCATTTTCTGCGTAATTTTGAAATTGAATCTGATTCTATCTGACTTTGTTCCTTCCTTCGATTGTGATGAATGCAGCAGA ACGCGACGACGAGTAAAATTCAGCAGCAGAACGAATCGCAAGGAGAACGAGATTCATCGAACAATGACTCCGTCAATGCT GAGAGGTTTTTTTTTTTTTTTTTCATGCACTTGGAATTTGTTTGCATGAGTTTTTTTTTTTTTTGATTTATGTGTGGATT TGATTTATTTGTTTAGGGAATTTAAGCGTGTCCATACGTCAATGCATTCTGCGATATCAATGAACAAAACGGAGGTTCTA GATGATGTGCTAAATAATTTCTCAGAGGTAATTTAATCTTAGATTTTATGGCGATGAAGCTTCTTGATTTGATTCTGTTA CTAATTAGTATTGTTGCTTATTTCATTTCCATAAGCTGGTAATAATGTAGGGTTATTTTAGCCTTTCGCGTGAAAATCGT CGCAAGTTGCTCCTTGTGCTTGCTAGAGACTATGATCTCAATAGGACACGAGTTCGTGAGTTGATTAAGCAGTACCTTGG GCTTGAACTTCCGGCTGGTGAGTGATTTGTTTTATGTGTGTGTGTGCCGTGTGCTTTGCATTATTATTACTTTTGAAACT GTGTTGTGAGAGGAAGTGATTCAATTAGCAGATAAAGCTCAAGTGAGTGGCGCTGAAGAAGGGTTGTTTTCTTCGTTCTA CCGCATTGAGTGGAATTTGAGGCATGCCCTACAGCCAGTTTATGAAGTTCTGTTTGAACGTCTCAACACTCATCCTGGAG GGTTGAGGGTCTTAACCCTTCTCCGAGCTGATATCCTGTCCATTCTTGCGTAAGTTTCTGGCTGATGATGCGAATTGCTA CATGATTTTGGTATGAAAAGGGGGAGGATGAAACAAAGATAAGACAAGGGTTTAGCTTTGGATTCAAGGAATTTTGAATA TGATGAACAATTCTTCTTCTATACAGAGAGGAAAATATTGCATCTCTGAGAGCATTGGATTCTTATTTAAAGGAAAAACT TAGCACGTGGCTTAGTCCTGCTGCCTTAGAGCTTCATCAAATAACATGGGACGATCCTGCTTCTCTGCTGGAGAAAATTG TTGCTTATGAAGTACTTTTCTTCTTTTCATTTCTTGAATGGTCATATCATATAGCTCTGTTTCTTCCATTATGTTTACAA TCTTCAATATCTTGTGCAGGCTGTGCATCCTATTAGCAACCTCCTAGATCTTAAAAGAAGGCTGGGTGTTGGCCGTCGCT GCTTTGGATACTTACACGCAGCAATTCCTGGTCAGCAGTTATTCTAGCTCTTGTTTACTCAATGATAATTCTCTACCTGG CTATATCTGATCCAATAAGTCTTTTATTGTTTGGCTTCTGCTCAATTCAAGTCTGTATATCTTGAAAACAATCGAGTTTT CATAGGTGATGTCTCTTTGAGCGACTTTAGTTAAACTATTTAATGTGGTTGCTTTAATGATTTTCCTCAGGTGAACCCTT AATATTCATTGAAGTTGCACTACTGAAAAATGTAGCTCAGACTATACAGGTTAATTTTGTCTGAACTTTTAACTTGAACA AACCCATATTCAGTACTTTTTTTAATCAGTATTTTGTTGCACAGGAAGTTTTGTGGGATAGTCCTCCTATATCTGAAATT GAGGCAAAATGTGCATTGTTCTACTCCATATCATCAACTCAGGTAGGCATTATAAAAGTAATGAAAAGTTGCAGCTATTG GAAATATGACGATATACAGAAAAATTGTTAATTCCATAATTATATCTTGGTGAAGTTCAGTACGGTCCTTTTCAGTGAAA AGTGAGCTGTGCCTCATTCTTGGGCCTTTTATCTGGCTCGAATTTATTGCTACTATTTGATTTGCTTTATTTTCCTCTTT TCTTCTCTGATATGTTTTACACCTTAAATCTGTTTACTTTTCTGTTTATACTATCTTCTGTTTCTCCCACTCTTGACTCC CTGAAGAAAAACAATGCCGGAGACAGTTTCTTTCCTGACTTTCATGCTTTTGAAAATTTTGCAGCCTGGCTTATCAGGGA TCAACTTAGGCAAGTTTCTTATCAAACGTGTTGTAACCCTGGTGAAAAGGGAGATGCCACATATTTCTGTAAGTGTTTTA CCAATTTTGTGGAGCTTTCTGAATTTTAAAGGCAGAATCAAACATATCTTCTTTTTAACACCATCATATCTTAAAATATT TTTCTTAACTCATACTTGAATACTTCTTCTTTTTTCTTGGTTTTGATATGAATGGTATTGTCCACACAAAAAAAGCATGC TGGTCATTTTTTACTTCTTTTCTGATGGGGAGATTTTCTTACATTAGTTCAACTTTCCGGTTTCATTTTTTAAATCATTG GTTTTAAAATTCATTCTCCTCCCAAAGCTGCAAACTTATCAGTTCATTGGTTCTCAAAAGAATAAAGGCCCATGGCAGTT CCCATCAAGACTAATTCTCACAAATTGATATTTTGCTTCCATTGTTCATAAGACTAGAATCTGAAAGTAGTTTCCTTATT CTCAATAGTTGTTGGGCGCTTATGTTACGAAAAATCCTTGTCAAATGCCATGTTTCCTAGGATACTTCCATGTCTTATAT ATTCTAAGATTGCTGAACAATTGTTGCTTGTAGACGTTTGCAACTCTCAGTCCCATCCCAGGATTCATGCCATGGCTCTT GTCCAAGTTGGCATCTCAAGCGGTGCTTGCTGATGGAGATGTCTCACAACCACTGGCCGAGGGATCCGGTTCCACATTCT ATGAGAATATACTTAAACCAGAAGAAGAAGAAGCACTTATGGGTTTACCTAAGTAAGCCCTATACTATTCTATCTTGATG TTTTATCTTACGATATTCATGGTTATTGTTTTCCAATCCCACCAGTTACTTGTATGGAAGTTTCATGATACTATAAAGTA AGCTGCCGCAATAGCTGCATTTCATGTGTTTTCTTTCTTTCTCTTTTTGATATCTTTCCCATTTCCTTTTTTTTTTCTTC TTCTTTGACTGTGAGAACTATTAGTTCTATCTGTTGAAACAAAATTAGAAATTTTAAGGATTTATATAATGAAAAAAAAA TCATATTTCAACGTAATAAAGAATTGCCAAATTCCGTCCTTTTATGATCCTTTGTTGTCAATGTAAAGAATCCTATGCTG ACAGTAGGGCACCCAAATTTCCTTTCTTTACATGCCTTGACTATTATGACGATGATTAATGTTAATAGTAACTTCTATTT GCTCTCCTAGTTTGTCTCCGGTATGCTCATTTGATTAACATGATAAAATCAATGTGAGTTGCAGAGATATTGCCAAGGGA ACAAATGGAATGGAAGTTCTGTTCAACTTGCTTACTTCGACATCCTATAAGTGGATTCATTCGCCAGAAATTCTGTCAGC ATTAAAACCCCCGTTGATGCGTTTATGTGCCAGGTATTGCAAACAAATCATGGGAAATCAAATAAACCAATGTTAGAAAT AACACCTTTGAATATTGCATTGAGCTAGGTGGCTGGCTACACCCATACTTCCTAATTCATGGTAAAGTGATCAGAAAACT TGTGATTCTTTTTGCATCATAGATACCTTCTGCAAGAGAAGAAAAGAGGAAAAGCCTTGGACTCTGTCGCAAACTTTCAC TTGCAAAATGGAGCGGTATGTCTTGCAAGCTTAATGTACAGCTAATGAATTTCTCTGTTACTGGCAATGGCATTTTCATT GTGAAACCAGCAGTTTCTTTATAGCACATTATACTCTGTTTTGACATCTTCGATGGCTTTTCCACTGACGATGTGGTATG GGTTATTATCTTGGCATTTATTTCTATGAGTTCTTTAAATGACAAAAGTGGGCGTTTTCATGAAGCAAATTTATGTCCTG TCCACGAGTAAGTTGGCATGAATCACTTTTTACTTCTCAATATGGAACAGATGGTTGAAAGAATAAATTGGATGGCAGAC CGATCAGAAAAAGGTCTTTCTCAGAGTGGAGGCATCATGGTGAACTATGTCTATTGGTAATAAACCATTCTCTTGAAAAT TTTGGATCTTGCTTATGCTCTTACCCAATTATATTCCCCATTATAGTTATGCTACATTGAAAAGTTAATCTTACTCCATC TTTCTTCTGGTTGTGA
CDS sequence (LotjaGi6g1v0290300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGCAGAACGCGACGACGAGTAAAATTCAGCAGCAGAACGAATCGCAAGGAGAACGAGATTCATCGAACAATGACTC CGTCAATGCTGAGAGGGAATTTAAGCGTGTCCATACGTCAATGCATTCTGCGATATCAATGAACAAAACGGAGGTTCTAG ATGATGTGCTAAATAATTTCTCAGAGGGTTATTTTAGCCTTTCGCGTGAAAATCGTCGCAAGTTGCTCCTTGTGCTTGCT AGAGACTATGATCTCAATAGGACACGAGTTCGTGAGTTGATTAAGCAGTACCTTGGGCTTGAACTTCCGGCTGGTGATAA AGCTCAAGTGAGTGGCGCTGAAGAAGGGTTGTTTTCTTCGTTCTACCGCATTGAGTGGAATTTGAGGCATGCCCTACAGC CAGTTTATGAAGTTCTGTTTGAACGTCTCAACACTCATCCTGGAGGGTTGAGGGTCTTAACCCTTCTCCGAGCTGATATC CTGTCCATTCTTGCAGAGGAAAATATTGCATCTCTGAGAGCATTGGATTCTTATTTAAAGGAAAAACTTAGCACGTGGCT TAGTCCTGCTGCCTTAGAGCTTCATCAAATAACATGGGACGATCCTGCTTCTCTGCTGGAGAAAATTGTTGCTTATGAAG CTGTGCATCCTATTAGCAACCTCCTAGATCTTAAAAGAAGGCTGGGTGTTGGCCGTCGCTGCTTTGGATACTTACACGCA GCAATTCCTGGTGAACCCTTAATATTCATTGAAGTTGCACTACTGAAAAATGTAGCTCAGACTATACAGGAAGTTTTGTG GGATAGTCCTCCTATATCTGAAATTGAGGCAAAATGTGCATTGTTCTACTCCATATCATCAACTCAGCCTGGCTTATCAG GGATCAACTTAGGCAAGTTTCTTATCAAACGTGTTGTAACCCTGGTGAAAAGGGAGATGCCACATATTTCTACGTTTGCA ACTCTCAGTCCCATCCCAGGATTCATGCCATGGCTCTTGTCCAAGTTGGCATCTCAAGCGGTGCTTGCTGATGGAGATGT CTCACAACCACTGGCCGAGGGATCCGGTTCCACATTCTATGAGAATATACTTAAACCAGAAGAAGAAGAAGCACTTATGG GTTTACCTAAAGATATTGCCAAGGGAACAAATGGAATGGAAGTTCTGTTCAACTTGCTTACTTCGACATCCTATAAGTGG ATTCATTCGCCAGAAATTCTGTCAGCATTAAAACCCCCGTTGATGCGTTTATGTGCCAGATACCTTCTGCAAGAGAAGAA AAGAGGAAAAGCCTTGGACTCTGTCGCAAACTTTCACTTGCAAAATGGAGCGATGGTTGAAAGAATAAATTGGATGGCAG ACCGATCAGAAAAAGGTCTTTCTCAGAGTGGAGGCATCATGGTGAACTATGTCTATTGGTAA
Protein sequence (LotjaGi6g1v0290300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQQNATTSKIQQQNESQGERDSSNNDSVNAEREFKRVHTSMHSAISMNKTEVLDDVLNNFSEGYFSLSRENRRKLLLVLA RDYDLNRTRVRELIKQYLGLELPAGDKAQVSGAEEGLFSSFYRIEWNLRHALQPVYEVLFERLNTHPGGLRVLTLLRADI LSILAEENIASLRALDSYLKEKLSTWLSPAALELHQITWDDPASLLEKIVAYEAVHPISNLLDLKRRLGVGRRCFGYLHA AIPGEPLIFIEVALLKNVAQTIQEVLWDSPPISEIEAKCALFYSISSTQPGLSGINLGKFLIKRVVTLVKREMPHISTFA TLSPIPGFMPWLLSKLASQAVLADGDVSQPLAEGSGSTFYENILKPEEEEALMGLPKDIAKGTNGMEVLFNLLTSTSYKW IHSPEILSALKPPLMRLCARYLLQEKKRGKALDSVANFHLQNGAMVERINWMADRSEKGLSQSGGIMVNYVYW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| MobiDBLite | 1 | 24 | 24 | - | – | |
| Gene3D | 7 | 188 | 182 | 5.8E-34 | ||
| PANTHER | 27 | 472 | 446 | 5.7E-163 | ||
| Pfam | 125 | 186 | 62 | 2.6E-10 | ||
| Gene3D | 190 | 473 | 284 | 3.6E-109 | ||
| Pfam | 191 | 472 | 282 | 1.7E-91 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Fatty acid biosynthetic process | The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes. | ||
| Molecular function | Malonyl-CoA decarboxylase activity | Catalysis of the reaction: malonyl-CoA = acetyl-CoA + CO2. |
Expression pattern of LotjaGi6g1v0290300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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