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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR043128
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We have found 339 results. Now displaying 2 of 7 with 50 rows per page. This search has taken 6.059s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0016800_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A0L9V4Z2|A0A0L9V4Z2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0016800_LC LjG1.1_chr2 5753985 5763639 -
2 domain predictions
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LotjaGi2g1v0016800_LC.2
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A0L9V4Z2|A0A0L9V4Z2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0016800_LC LjG1.1_chr2 5753998 5763659 -
2 domain predictions
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LotjaGi2g1v0020300_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0020300_LC LjG1.1_chr2 7416313 7425592 -
2 domain predictions
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LotjaGi2g1v0057300_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 17.6; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A151U7M3|A0A151U7M3_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi2g1v0057300_LC LjG1.1_chr2 11714447 11714782 +
2 domain predictions
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LotjaGi2g1v0057800_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 17.6; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151TQT4|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0057800_LC LjG1.1_chr2 11919679 11939676 +
2 domain predictions
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LotjaGi2g1v0078400_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151TBE7|A0A151TBE7_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0078400_LC LjG1.1_chr2 21090987 21091443 +
2 domain predictions
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LotjaGi2g1v0078500_LC.1
n.a. Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT5G07670.1 RNI-like superfamily protein; Swiss-Prot: sp|P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0078500_LC LjG1.1_chr2 21155569 21157881 -
2 domain predictions
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LotjaGi2g1v0078600_LC.1
n.a. Gag-pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0078600_LC LjG1.1_chr2 21158134 21158634 -
2 domain predictions
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LotjaGi2g1v0079500_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151R8H2|A0A151R8H2_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0079500_LC LjG1.1_chr2 21288271 21289066 -
2 domain predictions
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LotjaGi2g1v0089800_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151QNT0|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0089800_LC LjG1.1_chr2 26299941 26300482 +
2 domain predictions
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LotjaGi2g1v0090800_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0090800_LC LjG1.1_chr2 27175595 27177748 +
2 domain predictions
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LotjaGi2g1v0091500_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0091500_LC LjG1.1_chr2 27484144 27486297 +
2 domain predictions
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LotjaGi2g1v0094200_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0094200_LC LjG1.1_chr2 30523151 30525304 +
2 domain predictions
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LotjaGi2g1v0101900.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0101900 LjG1.1_chr2 33880364 33930549 -
2 domain predictions
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LotjaGi2g1v0102500_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A151UHI6|A0A151UHI6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi2g1v0102500_LC LjG1.1_chr2 34411860 34414053 +
2 domain predictions
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LotjaGi2g1v0106400_LC.2
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0106400_LC LjG1.1_chr2 36128035 36139661 +
2 domain predictions
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LotjaGi2g1v0107500_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT3G50070.1 CYCLIN D3;3; Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A151UHI6|A0A151UHI6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi2g1v0107500_LC LjG1.1_chr2 36676709 36677537 -
2 domain predictions
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LotjaGi2g1v0108000_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108000_LC LjG1.1_chr2 36909070 36911223 -
2 domain predictions
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LotjaGi2g1v0108100_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108100_LC LjG1.1_chr2 37082096 37084249 -
2 domain predictions
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LotjaGi2g1v0108200_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7Z9|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0108200_LC LjG1.1_chr2 37130196 37132350 +
2 domain predictions
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LotjaGi2g1v0108400_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151UF56|A0A151UF56_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0108400_LC LjG1.1_chr2 37352759 37354863 +
2 domain predictions
 –
LotjaGi2g1v0108500_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108500_LC LjG1.1_chr2 37406825 37408978 +
2 domain predictions
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LotjaGi2g1v0108700_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108700_LC LjG1.1_chr2 37663098 37665251 +
2 domain predictions
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LotjaGi2g1v0108900_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108900_LC LjG1.1_chr2 37765788 37767941 -
2 domain predictions
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LotjaGi2g1v0109100_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0109100_LC LjG1.1_chr2 37832983 37835136 -
2 domain predictions
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LotjaGi2g1v0110000_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0110000_LC LjG1.1_chr2 38531804 38533957 -
2 domain predictions
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LotjaGi2g1v0111900_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0111900_LC LjG1.1_chr2 40451301 40451848 -
2 domain predictions
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LotjaGi2g1v0112300_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0112300_LC LjG1.1_chr2 40746235 40748388 -
2 domain predictions
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LotjaGi2g1v0112500_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0112500_LC LjG1.1_chr2 40973989 40976650 +
2 domain predictions
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LotjaGi2g1v0113200_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9V4A1|A0A0L9V4A1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0113200_LC LjG1.1_chr2 41381707 41397868 -
2 domain predictions
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LotjaGi2g1v0113600.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0113600 LjG1.1_chr2 41523640 41526113 -
2 domain predictions
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LotjaGi2g1v0116300_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0116300_LC LjG1.1_chr2 42944874 42958260 -
2 domain predictions
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LotjaGi2g1v0138500_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A151SJ80|A0A151SJ80_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0138500_LC LjG1.1_chr2 50601566 50601926 +
2 domain predictions
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LotjaGi2g1v0179900_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0179900_LC LjG1.1_chr2 60163210 60163611 -
2 domain predictions
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LotjaGi2g1v0187900_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0187900_LC LjG1.1_chr2 61750821 61751702 -
2 domain predictions
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LotjaGi2g1v0210800_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0210800_LC LjG1.1_chr2 65788929 65789810 -
2 domain predictions
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LotjaGi2g1v0211700_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon opus; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151QKV4|A0A151QKV4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0211700_LC LjG1.1_chr2 65937889 65965810 -
2 domain predictions
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LotjaGi2g1v0268300_LC.2
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151UCZ5|A0A151UCZ5_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0268300_LC LjG1.1_chr2 73783734 73784762 +
2 domain predictions
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LotjaGi2g1v0271800_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0271800_LC LjG1.1_chr2 74251988 74252869 +
2 domain predictions
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LotjaGi2g1v0325800_LC.1
n.a. Pol polyprotein; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151T6G8|A0A151T6G8_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0325800_LC LjG1.1_chr2 80117171 80122046 +
2 domain predictions
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LotjaGi2g1v0341800_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A061EEM4|A0A061EEM4_THECC Retrotransposon protein, putative; Found in the gene: LotjaGi2g1v0341800_LC LjG1.1_chr2 81894226 81912149 +
2 domain predictions
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LotjaGi2g1v0357900_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0357900_LC LjG1.1_chr2 85180674 85182827 +
2 domain predictions
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LotjaGi2g1v0358000_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151UH18|A0A151UH18_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0358000_LC LjG1.1_chr2 85186175 85188328 -
2 domain predictions
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LotjaGi2g1v0361000_LC.1
n.a. Gag-pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0361000_LC LjG1.1_chr2 85852364 85853999 +
2 domain predictions
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LotjaGi2g1v0459700.1
n.a. DNA polymerase IV; TAIR: AT1G49980.1 DNA/RNA polymerases superfamily protein; Swiss-Prot: sp|P34409|POLK_CAEEL DNA polymerase kappa; TrEMBL-Plants: tr|I1LFP9|I1LFP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0459700 LjG1.1_chr2 95342682 95353364 +
2 domain predictions
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LotjaGi2g1v0461300.1
n.a. DNA polymerase IV; TAIR: AT5G44750.1 DNA-directed DNA polymerase; Swiss-Prot: sp|A3EWL3|REV1_ARATH DNA repair protein REV1; TrEMBL-Plants: tr|A0A0R0LQ66|A0A0R0LQ66_SOYBN DNA repair protein REV1; Found in the gene: LotjaGi2g1v0461300 LjG1.1_chr2 95437511 95456871 +
2 domain predictions
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LotjaGi2g1v0461300.2
n.a. DNA polymerase IV; TAIR: AT5G44750.1 DNA-directed DNA polymerase; Swiss-Prot: sp|A3EWL3|REV1_ARATH DNA repair protein REV1; TrEMBL-Plants: tr|A0A0R0LQ66|A0A0R0LQ66_SOYBN DNA repair protein REV1; Found in the gene: LotjaGi2g1v0461300 LjG1.1_chr2 95437558 95455220 +
2 domain predictions
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LotjaGi2g1v0461300.3
n.a. DNA polymerase IV; TAIR: AT5G44750.1 DNA-directed DNA polymerase; Swiss-Prot: sp|A3EWL3|REV1_ARATH DNA repair protein REV1; TrEMBL-Plants: tr|A0A0R0LQ66|A0A0R0LQ66_SOYBN DNA repair protein REV1; Found in the gene: LotjaGi2g1v0461300 LjG1.1_chr2 95437598 95456661 +
2 domain predictions
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LotjaGi3g1v0085000_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0085000_LC LjG1.1_chr3 9579017 9579898 +
2 domain predictions
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LotjaGi3g1v0128000_LC.3
n.a. Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RKF4|A0A151RKF4_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0128000_LC LjG1.1_chr3 15718364 15722541 +
2 domain predictions
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