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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000054
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.254s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v2215260.1
n.a. 60S ribosomal protein L31 [Medicago truncatula] gi|357501155|ref|XP_003620866.1| chr4 30615416 30616453 +
6 domain predictions
3 GO terms
Lj4g3v3020500.1
n.a. 60S ribosomal protein L31 [Medicago truncatula] gi|357501155|ref|XP_003620866.1| chr4 40537074 40538428 +
6 domain predictions
3 GO terms
LotjaGi4g1v0319900.1
n.a. 60S ribosomal protein L31; TAIR: AT4G26230.1 Ribosomal protein L31e family protein; Swiss-Prot: sp|Q9M573|RL31_PERFR 60S ribosomal protein L31; TrEMBL-Plants: tr|I3SLW6|I3SLW6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0319900 LjG1.1_chr4 69761346 69763603 -
5 domain predictions
3 GO terms
LotjaGi4g1v0319900.2
n.a. 60S ribosomal protein L31; TAIR: AT5G56710.1 Ribosomal protein L31e family protein; Swiss-Prot: sp|Q9M573|RL31_PERFR 60S ribosomal protein L31; TrEMBL-Plants: tr|G7KIQ1|G7KIQ1_MEDTR 60S ribosomal protein L31B; Found in the gene: LotjaGi4g1v0319900 LjG1.1_chr4 69762502 69762862 -
5 domain predictions
3 GO terms
LotjaGi4g1v0319900.3
n.a. 60S ribosomal protein L31; TAIR: AT4G26230.1 Ribosomal protein L31e family protein; Swiss-Prot: sp|Q9M573|RL31_PERFR 60S ribosomal protein L31; TrEMBL-Plants: tr|I3SLW6|I3SLW6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0319900 LjG1.1_chr4 69762502 69763324 -
5 domain predictions
3 GO terms
LotjaGi4g1v0442100.1
n.a. 60S ribosomal protein L31; TAIR: AT5G56710.1 Ribosomal protein L31e family protein; Swiss-Prot: sp|Q9M573|RL31_PERFR 60S ribosomal protein L31; TrEMBL-Plants: tr|I3SLW6|I3SLW6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0442100 LjG1.1_chr4 81578317 81580610 +
5 domain predictions
3 GO terms
LotjaGi4g1v0442100.2
n.a. 60S ribosomal protein L31; TAIR: AT5G56710.1 Ribosomal protein L31e family protein; Swiss-Prot: sp|Q9M573|RL31_PERFR 60S ribosomal protein L31; TrEMBL-Plants: tr|I3SLW6|I3SLW6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0442100 LjG1.1_chr4 81578630 81579606 +
5 domain predictions
3 GO terms