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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000073
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 225 results. Now displaying 1 of 5 with 50 rows per page. This search has taken 5.538s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0019049.1
n.a. PREDICTED: maspardin-like [Cicer arietinum] gi|502175950|ref|XP_004515771.1| chr0 7507487 7512686 +
2 domain predictions
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Lj0g3v0043829.1
n.a. PREDICTED: polyneuridine-aldehyde esterase-like [Glycine max] gi|356520748|ref|XP_003529022.1| chr0 14407815 14413503 -
2 domain predictions
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Lj0g3v0059429.1
n.a. PREDICTED: bifunctional epoxide hydrolase 2-like [Cicer arietinum] gi|502153382|ref|XP_004509321.1| chr0 19659684 19660579 +
2 domain predictions
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Lj0g3v0067699.1
n.a. Epoxide hydrolase [Medicago truncatula] gi|357504133|ref|XP_003622355.1| chr0 24081488 24084359 +
2 domain predictions
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Lj0g3v0067699.2
n.a. Epoxide hydrolase [Medicago truncatula] gi|357504133|ref|XP_003622355.1| chr0 24081488 24084359 +
2 domain predictions
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Lj0g3v0089829.1
n.a. PREDICTED: haloalkane dehalogenase-like isoform X1 [Cicer arietinum] gi|502147891|ref|XP_004506956.1| chr0 36928509 36932780 -
3 domain predictions
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Lj0g3v0107429.1
n.a. Monoglyceride lipase [Medicago truncatula] gi|357496923|ref|XP_003618750.1| chr0 46341291 46346480 -
2 domain predictions
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Lj0g3v0107429.2
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356545758|ref|XP_003541302.1| chr0 46341291 46346228 -
2 domain predictions
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Lj0g3v0117039.1
n.a. Sigma factor sigB regulation protein rsbQ [Medicago truncatula] gi|357476343|ref|XP_003608457.1| chr0 51556732 51558873 +
2 domain predictions
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Lj0g3v0131869.1
n.a. Monoacylglycerol lipase ABHD6 [Medicago truncatula] gi|357463311|ref|XP_003601937.1| chr0 60095504 60099075 -
3 domain predictions
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Lj0g3v0194809.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502158479|ref|XP_004511168.1| chr0 95023111 95027688 +
2 domain predictions
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Lj0g3v0214529.1
n.a. Methyl jasmonate esterase [Medicago truncatula] gi|357512899|ref|XP_003626738.1| chr0 108716671 108720282 -
2 domain predictions
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Lj0g3v0235999.1
n.a. Monoacylglycerol lipase ABHD6 [Medicago truncatula] gi|357463311|ref|XP_003601937.1| chr0 122312460 122313323 +
3 domain predictions
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Lj0g3v0247169.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502158479|ref|XP_004511168.1| chr0 128090570 128095147 -
2 domain predictions
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Lj0g3v0251589.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508708156|gb|EOY00053.1| chr0 130521504 130526520 +
2 domain predictions
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Lj0g3v0259659.1
n.a. Alpha/beta-Hydrolases superfamily protein isoform 2 [Theobroma cacao] gi|508786211|gb|EOY33467.1| chr0 134949757 134952420 -
2 domain predictions
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Lj0g3v0268549.1
n.a. Alpha/beta hydrolase-fold family protein [Medicago truncatula] gi|357458507|ref|XP_003599534.1| chr0 139026416 139028857 -
2 domain predictions
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Lj0g3v0300609.1
n.a. Abhydrolase domain-containing protein [Medicago truncatula] gi|357438167|ref|XP_003589359.1| chr0 156219705 156224035 +
3 domain predictions
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Lj0g3v0304309.1
n.a. PREDICTED: pheophorbidase-like [Glycine max] gi|356516217|ref|XP_003526792.1| chr0 158512020 158514528 +
2 domain predictions
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Lj0g3v0360289.1
n.a. DNA photolyase [Arabidopsis thaliana] gi|240256063|ref|NP_194259.4| chr0 189721849 189726685 +
2 domain predictions
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Lj0g3v0360289.2
n.a. DNA photolyase [Arabidopsis thaliana] gi|240256063|ref|NP_194259.4| chr0 189721992 189726685 +
2 domain predictions
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Lj0g3v0360289.3
n.a. DNA photolyase [Arabidopsis thaliana] gi|240256063|ref|NP_194259.4| chr0 189722007 189726685 +
2 domain predictions
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Lj0g3v0360799.1
n.a. Alpha/beta-Hydrolases superfamily protein isoform 1 [Theobroma cacao] gi|508715864|gb|EOY07761.1| chr0 190022914 190025599 -
2 domain predictions
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Lj1g3v0318150.1
n.a. Alpha/beta-Hydrolases superfamily protein [Theobroma cacao] gi|508776330|gb|EOY23586.1| chr1 3633003 3641346 -
2 domain predictions
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Lj1g3v0683890.1
n.a. PREDICTED: abhydrolase domain-containing protein 11-like [Glycine max] gi|356505392|ref|XP_003521475.1| chr1 8929661 8932694 +
2 domain predictions
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Lj1g3v1112830.1
n.a. PREDICTED: 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase-like [Glycine max] gi|356516204|ref|XP_003526786.1| chr1 13913771 13918977 -
2 domain predictions
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Lj1g3v1788330.1
n.a. PREDICTED: monoacylglycerol lipase ABHD6-like [Cicer arietinum] gi|502132566|ref|XP_004501423.1| chr1 21458502 21460463 -
3 domain predictions
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Lj1g3v2082100.1
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356507933|ref|XP_003522717.1| chr1 24614362 24617852 +
2 domain predictions
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Lj1g3v2143330.1
n.a. PREDICTED: abhydrolase domain-containing protein 4-like [Glycine max] gi|356509809|ref|XP_003523638.1| chr1 25898804 25904729 -
3 domain predictions
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Lj1g3v2796640.1
n.a. Proline iminopeptidase [Medicago truncatula] gi|357507583|ref|XP_003624080.1| chr1 31749757 31754095 +
2 domain predictions
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Lj1g3v3027220.1
n.a. PREDICTED: probable esterase At1g33990-like [Glycine max] gi|356568777|ref|XP_003552586.1| chr1 34666597 34671242 +
2 domain predictions
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Lj1g3v3313170.1
n.a. Alpha/beta-Hydrolases superfamily protein [Theobroma cacao] gi|508712283|gb|EOY04180.1| chr1 37022393 37026640 -
2 domain predictions
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Lj1g3v3315210.1
n.a. PREDICTED: monoglyceride lipase-like isoform X1 [Cicer arietinum] gi|502090066|ref|XP_004489110.1| chr1 37037609 37041216 -
2 domain predictions
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Lj1g3v3315210.2
n.a. PREDICTED: monoglyceride lipase-like isoform X2 [Cicer arietinum] gi|502090069|ref|XP_004489111.1| chr1 37037609 37041216 -
2 domain predictions
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Lj1g3v3729360.1
n.a. Epoxide hydrolase, partial [Medicago truncatula] gi|358347156|ref|XP_003637627.1| chr1 42939417 42940902 -
3 domain predictions
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Lj1g3v3729370.1
n.a. PREDICTED: epoxide hydrolase 2-like [Glycine max] gi|356548757|ref|XP_003542766.1| chr1 42943005 42945172 -
3 domain predictions
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Lj1g3v3834330.1
n.a. triacylglycerol/steryl ester lipase-like protein [Medicago truncatula] gi|39636476|gb|AAR29056.1| chr1 43708219 43713566 -
2 domain predictions
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Lj1g3v3834380.1
n.a. PREDICTED: triacylglycerol lipase 2-like [Glycine max] gi|356558723|ref|XP_003547652.1| chr1 43742089 43744303 -
2 domain predictions
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Lj1g3v3902480.3
n.a. PREDICTED: acyltransferase-like protein At3g26840, chloroplastic-like [Cicer arietinum] gi|502106585|ref|XP_004492989.1| chr1 45040500 45075686 -
2 domain predictions
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Lj1g3v4012850.1
n.a. PREDICTED: lipase 1-like [Glycine max] gi|356506198|ref|XP_003521874.1| chr1 47512376 47514692 +
3 domain predictions
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Lj1g3v4156040.1
n.a. PREDICTED: proline iminopeptidase-like [Glycine max] gi|356554862|ref|XP_003545761.1| chr1 49422817 49428147 +
2 domain predictions
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Lj1g3v4156040.2
n.a. PREDICTED: proline iminopeptidase-like [Glycine max] gi|356554862|ref|XP_003545761.1| chr1 49423074 49428147 +
3 domain predictions
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Lj1g3v4579110.1
n.a. Alpha/beta-Hydrolases superfamily protein isoform 1 [Theobroma cacao] gi|508715864|gb|EOY07761.1| chr1 54476249 54481114 +
2 domain predictions
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Lj1g3v4579110.2
n.a. Alpha/beta-Hydrolases superfamily protein isoform 1 [Theobroma cacao] gi|508715864|gb|EOY07761.1| chr1 54477789 54481114 +
2 domain predictions
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Lj1g3v4875750.1
n.a. PREDICTED: bifunctional epoxide hydrolase 2-like [Cicer arietinum] gi|502112604|ref|XP_004494384.1| chr1 59216553 59219780 +
3 domain predictions
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Lj1g3v4918670.1
n.a. PREDICTED: epoxide hydrolase 2-like [Glycine max] gi|356572962|ref|XP_003554634.1| chr1 59682502 59684376 +
2 domain predictions
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Lj1g3v4918690.1
n.a. epoxide hydrolase A [Vigna radiata] gi|311088595|gb|ADP68585.1| chr1 59687749 59690576 +
2 domain predictions
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Lj1g3v4918700.1
n.a. PREDICTED: epoxide hydrolase 2-like [Glycine max] gi|356572960|ref|XP_003554633.1| chr1 59687794 59690466 +
2 domain predictions
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Lj1g3v4918750.1
n.a. PREDICTED: epoxide hydrolase 2-like [Glycine max] gi|356572962|ref|XP_003554634.1| chr1 59707532 59707912 +
2 domain predictions
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Lj1g3v4931550.1
n.a. PREDICTED: protein AUXIN RESPONSE 4-like [Glycine max] gi|356505855|ref|XP_003521705.1| chr1 59993766 59997555 -
2 domain predictions
 –