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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000103
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.913s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0018789.1
n.a. PREDICTED: thioredoxin reductase 2-like [Glycine max] gi|356561017|ref|XP_003548782.1| chr0 7397213 7400094 +
2 domain predictions
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Lj0g3v0049079.1
n.a. PREDICTED: NADPH-dependent thioredoxin reductase 3-like [Cicer arietinum] gi|502166343|ref|XP_004513864.1| chr0 16575249 16581584 +
2 domain predictions
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Lj0g3v0049079.2
n.a. PREDICTED: NADPH-dependent thioredoxin reductase 3-like [Cicer arietinum] gi|502166343|ref|XP_004513864.1| chr0 16575249 16582924 +
2 domain predictions
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Lj0g3v0049159.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA2-like [Glycine max] gi|356511355|ref|XP_003524392.1| chr0 16619511 16622163 +
2 domain predictions
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Lj0g3v0049349.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA2-like [Glycine max] gi|356529622|ref|XP_003533388.1| chr0 16742786 16746402 +
2 domain predictions
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Lj0g3v0085899.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA3-like [Glycine max] gi|356533385|ref|XP_003535245.1| chr0 34509104 34512194 +
2 domain predictions
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Lj0g3v0101099.1
n.a. Dimethylaniline monooxygenase [Medicago truncatula] gi|357436843|ref|XP_003588697.1| chr0 42816185 42818337 -
2 domain predictions
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Lj1g3v2036560.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA6-like [Glycine max] gi|356507869|ref|XP_003522685.1| chr1 23982085 23986890 +
2 domain predictions
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Lj1g3v4528740.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA8-like [Glycine max] gi|356572315|ref|XP_003554314.1| chr1 53502790 53504610 +
2 domain predictions
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Lj1g3v4764550.1
n.a. PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10-like [Cicer arietinum] gi|502112410|ref|XP_004494322.1| chr1 57376410 57378105 -
2 domain predictions
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Lj1g3v4764680.3
n.a. PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10-like [Cicer arietinum] gi|502112410|ref|XP_004494322.1| chr1 57409399 57411939 -
2 domain predictions
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Lj2g3v1574220.1
n.a. PREDICTED: thioredoxin reductase 2-like [Cicer arietinum] gi|502161816|ref|XP_004512292.1| chr2 25107910 25114151 +
2 domain predictions
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Lj3g3v2948580.1
n.a. PREDICTED: apoptosis-inducing factor homolog A-like [Cicer arietinum] gi|502145876|ref|XP_004506219.1| chr3 36736821 36739222 -
2 domain predictions
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Lj3g3v3189630.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA10-like [Glycine max] gi|356507473|ref|XP_003522490.1| chr3 39390238 39392336 +
2 domain predictions
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Lj3g3v3189640.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA10-like [Glycine max] gi|356507473|ref|XP_003522490.1| chr3 39396640 39398724 +
2 domain predictions
 –