Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000157
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 478 results. Now displaying 1 of 10 with 50 rows per page. This search has taken 5.726s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0036579.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 11678260 11678672 -
6 domain predictions
2 GO terms
Lj0g3v0036599.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 11682173 11683519 +
6 domain predictions
2 GO terms
Lj0g3v0044549.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357469227|ref|XP_003604898.1| chr0 14720717 14727166 -
5 domain predictions
2 GO terms
Lj0g3v0044689.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356494937|ref|XP_003516337.1| chr0 14764883 14767763 +
6 domain predictions
2 GO terms
Lj0g3v0045059.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502091202|ref|XP_004489475.1| chr0 14809885 14814337 +
6 domain predictions
2 GO terms
Lj0g3v0064119.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
6 domain predictions
2 GO terms
Lj0g3v0064119.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
6 domain predictions
2 GO terms
Lj0g3v0064119.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
6 domain predictions
2 GO terms
Lj0g3v0065839.1
n.a. Resistance protein [Medicago truncatula] gi|357468515|ref|XP_003604542.1| chr0 23018141 23020319 -
3 domain predictions
2 GO terms
Lj0g3v0068679.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357478609|ref|XP_003609590.1| chr0 24617475 24618237 -
4 domain predictions
2 GO terms
Lj0g3v0070709.1
n.a. Disease resistance-like protein GS4-1 [Medicago truncatula] gi|357449965|ref|XP_003595259.1| chr0 25838928 25839992 +
5 domain predictions
2 GO terms
Lj0g3v0072059.1
n.a. Resistance protein MG13 [Medicago truncatula] gi|357494453|ref|XP_003617515.1| chr0 26590294 26593242 +
6 domain predictions
2 GO terms
Lj0g3v0075649.1
n.a. Resistance protein MG13 [Medicago truncatula] gi|357494453|ref|XP_003617515.1| chr0 28750694 28755484 +
6 domain predictions
2 GO terms
Lj0g3v0075669.1
n.a. Resistance protein MG13 [Medicago truncatula] gi|357494453|ref|XP_003617515.1| chr0 28765787 28768239 -
6 domain predictions
2 GO terms
Lj0g3v0081059.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 31566547 31568422 -
6 domain predictions
2 GO terms
Lj0g3v0091769.1
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357513703|ref|XP_003627140.1| chr0 38044347 38046473 -
5 domain predictions
2 GO terms
Lj0g3v0092219.1
n.a. n.a. chr0 38334360 38340661 +
6 domain predictions
2 GO terms
Lj0g3v0092229.1
n.a. Putative disease-resistance protein SR1 [Medicago truncatula] gi|357494485|ref|XP_003617531.1| chr0 38334501 38337047 -
6 domain predictions
2 GO terms
Lj0g3v0092229.2
n.a. toll interleukin receptor [Phaseolus vulgaris] gi|112378939|gb|ABI16465.1| chr0 38334501 38340661 -
6 domain predictions
2 GO terms
Lj0g3v0092229.3
n.a. Putative disease-resistance protein SR1 [Medicago truncatula] gi|357494485|ref|XP_003617531.1| chr0 38334697 38337485 -
6 domain predictions
2 GO terms
Lj0g3v0097779.1
n.a. TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa] gi|193584702|gb|ACF19651.1| chr0 41362190 41364781 +
3 domain predictions
2 GO terms
Lj0g3v0098939.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156470|ref|XP_004510490.1| chr0 41952250 41955708 +
6 domain predictions
2 GO terms
Lj0g3v0101439.4
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357469145|ref|XP_003604857.1| chr0 43043998 43052614 -
6 domain predictions
2 GO terms
Lj0g3v0102049.1
n.a. TIR-NBS-LRR-TIR type disease resistance protein [Medicago truncatula] gi|357462269|ref|XP_003601416.1| chr0 43346828 43347484 +
6 domain predictions
2 GO terms
Lj0g3v0104929.1
n.a. Disease resistance-like protein [Medicago truncatula] gi|357486939|ref|XP_003613757.1| chr0 44949432 44951846 -
5 domain predictions
2 GO terms
Lj0g3v0117929.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542395|ref|XP_003539652.1| chr0 52126376 52128146 +
6 domain predictions
2 GO terms
Lj0g3v0117939.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542395|ref|XP_003539652.1| chr0 52126708 52127928 +
6 domain predictions
2 GO terms
Lj0g3v0120789.1
n.a. TIR; Disease resistance protein [Medicago truncatula] gi|124361215|gb|ABN09187.1| chr0 53731554 53732807 +
6 domain predictions
2 GO terms
Lj0g3v0120799.1
n.a. PREDICTED: heat shock cognate 70 kDa protein 2-like isoform 2 [Glycine max] gi|356568994|ref|XP_003552692.1| chr0 53736740 53741385 -
6 domain predictions
2 GO terms
Lj0g3v0122319.1
n.a. Resistance protein [Medicago truncatula] gi|357513247|ref|XP_003626912.1| chr0 54683417 54685058 -
5 domain predictions
2 GO terms
Lj0g3v0128719.1
n.a. n.a. chr0 58177473 58179794 +
6 domain predictions
2 GO terms
Lj0g3v0132469.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497765|ref|XP_003517729.1| chr0 60457324 60461356 -
6 domain predictions
2 GO terms
Lj0g3v0132469.2
n.a. n.a. chr0 60457324 60461356 -
6 domain predictions
2 GO terms
Lj0g3v0132719.1
n.a. Putative disease-resistance protein SR1 [Medicago truncatula] gi|357494485|ref|XP_003617531.1| chr0 60574717 60577120 -
6 domain predictions
2 GO terms
Lj0g3v0133229.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 60912920 60921656 +
6 domain predictions
2 GO terms
Lj0g3v0153369.1
n.a. PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like isoform X2 [Cicer arietinum] gi|502091209|ref|XP_004489477.1| chr0 71645978 71646421 +
6 domain predictions
2 GO terms
Lj0g3v0153749.1
n.a. TIR [Medicago truncatula] gi|124361213|gb|ABN09185.1| chr0 71874313 71874810 +
6 domain predictions
2 GO terms
Lj0g3v0162289.1
n.a. TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa] gi|193584702|gb|ACF19651.1| chr0 76512312 76513776 -
3 domain predictions
2 GO terms
Lj0g3v0163919.1
n.a. Resistance protein [Medicago truncatula] gi|357518005|ref|XP_003629291.1| chr0 77537272 77538815 -
6 domain predictions
2 GO terms
Lj0g3v0167069.1
n.a. Disease resistance-like protein [Medicago truncatula] gi|357486563|ref|XP_003613569.1| chr0 79417979 79420367 -
6 domain predictions
2 GO terms
Lj0g3v0168919.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545124|ref|XP_003540995.1| chr0 80680070 80683104 +
6 domain predictions
2 GO terms
Lj0g3v0168919.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545124|ref|XP_003540995.1| chr0 80680070 80683104 +
6 domain predictions
2 GO terms
Lj0g3v0169179.1
n.a. TIR-NBS-LRR disease resistance protein [Cucumis melo subsp]. melo] gi|307135797|gb|ADN33676.1| chr0 80841195 80843947 -
6 domain predictions
2 GO terms
Lj0g3v0174759.1
n.a. TIR-similar-domain-containing protein TSDC [Medicago truncatula] gi|357494551|ref|XP_003617564.1| chr0 84331056 84333540 +
6 domain predictions
2 GO terms
Lj0g3v0180349.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506541|ref|XP_003522038.1| chr0 87740384 87741616 -
6 domain predictions
2 GO terms
Lj0g3v0186439.1
n.a. PREDICTED: probable disease resistance protein At1g52660-like [Cicer arietinum] gi|502183056|ref|XP_004517051.1| chr0 90852101 90852988 +
6 domain predictions
2 GO terms
Lj0g3v0187769.1
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468521|ref|XP_003604545.1| chr0 91607040 91612667 -
6 domain predictions
2 GO terms
Lj0g3v0187769.2
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468519|ref|XP_003604544.1| chr0 91609723 91612667 -
6 domain predictions
2 GO terms
Lj0g3v0188119.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357469545|ref|XP_003605057.1| chr0 91861757 91868805 -
6 domain predictions
2 GO terms
Lj0g3v0188509.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356499338|ref|XP_003518498.1| chr0 92161060 92162396 +
6 domain predictions
2 GO terms