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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000307
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.450s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0273709.1
n.a. PREDICTED: 30S ribosomal protein S16-like [Glycine max] gi|356576287|ref|XP_003556264.1| chr0 141876941 141877459 +
5 domain predictions
3 GO terms
Lj5g3v0508190.1
n.a. PREDICTED: 30S ribosomal protein S16-like [Glycine max] gi|356576287|ref|XP_003556264.1| chr5 5026251 5026906 +
5 domain predictions
3 GO terms
Lj6g3v1239530.1
n.a. 30S ribosomal protein S16 [Medicago truncatula] gi|357449871|ref|XP_003595212.1| chr6 15311918 15312771 -
5 domain predictions
3 GO terms
LotjaGi6g1v0230500.1
n.a. 30S ribosomal S16-like protein; TAIR: AT5G56940.1 Ribosomal protein S16 family protein; Swiss-Prot: sp|Q9LTS6|RS16B_ARATH 30S ribosomal protein S16-2, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I3SKX3|I3SKX3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0230500 LjG1.1_chr6 53928879 53931354 -
5 domain predictions
3 GO terms