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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000552
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.439s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v0336800.1
n.a. 60S ribosomal protein L44 [Medicago truncatula] gi|357445721|ref|XP_003593138.1| chr4 4163303 4165054 -
6 domain predictions
3 GO terms
Lj6g3v2221950.1
n.a. 60S ribosomal protein L44 [Medicago truncatula] gi|357445721|ref|XP_003593138.1| chr6 25935427 25936402 +
6 domain predictions
3 GO terms
LotjaGi4g1v0032400.1
n.a. 60S ribosomal protein L44; TAIR: AT3G23390.1 Zinc-binding ribosomal protein family protein; Swiss-Prot: sp|Q96499|RL44_GOSHI 60S ribosomal protein L44; TrEMBL-Plants: tr|K7M9P7|K7M9P7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0032400 LjG1.1_chr4 3966451 3969399 -
4 domain predictions
3 GO terms
LotjaGi4g1v0032400.2
n.a. 60S ribosomal protein L44; TAIR: AT3G23390.1 Zinc-binding ribosomal protein family protein; Swiss-Prot: sp|Q96499|RL44_GOSHI 60S ribosomal protein L44; TrEMBL-Plants: tr|A0A068V1D2|A0A068V1D2_COFCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0032400 LjG1.1_chr4 3968682 3969298 -
4 domain predictions
3 GO terms
LotjaGi6g1v0355300.1
n.a. 60S ribosomal protein L44; TAIR: AT3G23390.1 Zinc-binding ribosomal protein family protein; Swiss-Prot: sp|Q96499|RL44_GOSHI 60S ribosomal protein L44; TrEMBL-Plants: tr|K7M9P7|K7M9P7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0355300 LjG1.1_chr6 66728365 66729780 +
4 domain predictions
3 GO terms