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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000554
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.759s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0310509.1
n.a. PREDICTED: 40S ribosomal protein S7-like isoform X1 [Cicer arietinum] gi|502138435|ref|XP_004503405.1| chr0 162180062 162180597 +
3 domain predictions
3 GO terms
Lj1g3v3313160.1
n.a. 40S ribosomal protein S7-like protein [Medicago truncatula] gi|357496953|ref|XP_003618765.1| chr1 37019318 37021256 -
4 domain predictions
3 GO terms
Lj2g3v0723230.1
n.a. PREDICTED: 40S ribosomal protein S7-like isoform X1 [Cicer arietinum] gi|502138435|ref|XP_004503405.1| chr2 11432404 11434503 -
4 domain predictions
3 GO terms
Lj3g3v0423750.1
n.a. PREDICTED: 40S ribosomal protein S7-like [Cicer arietinum] gi|502163656|ref|XP_004512907.1| chr3 3705594 3707266 +
3 domain predictions
3 GO terms
LotjaGi1g1v0506000.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0506000 LjG1.1_chr1 102421745 102433675 -
2 domain predictions
3 GO terms
LotjaGi1g1v0506000.3
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0506000 LjG1.1_chr1 102421749 102433617 -
2 domain predictions
3 GO terms
LotjaGi1g1v0549500.1
n.a. 40S ribosomal protein S7; TAIR: AT5G16130.1 Ribosomal protein S7e family protein; Swiss-Prot: sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7; TrEMBL-Plants: tr|I3SXB6|I3SXB6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0549500 LjG1.1_chr1 107997539 108000125 -
4 domain predictions
3 GO terms
LotjaGi1g1v0549500.2
n.a. 40S ribosomal protein S7; TAIR: AT5G16130.1 Ribosomal protein S7e family protein; Swiss-Prot: sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7; TrEMBL-Plants: tr|I3SXB6|I3SXB6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0549500 LjG1.1_chr1 107998325 107999622 -
4 domain predictions
3 GO terms
LotjaGi1g1v0549500.3
n.a. 40S ribosomal protein S7; TAIR: AT5G16130.1 Ribosomal protein S7e family protein; Swiss-Prot: sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7; TrEMBL-Plants: tr|I3SXB6|I3SXB6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0549500 LjG1.1_chr1 107998325 107999932 -
4 domain predictions
3 GO terms
LotjaGi2g1v0205700.1
n.a. 40S ribosomal protein S7; TAIR: AT1G48830.1 Ribosomal protein S7e family protein; Swiss-Prot: sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7; TrEMBL-Plants: tr|V7C9Y3|V7C9Y3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0205700 LjG1.1_chr2 64902551 64905532 -
4 domain predictions
3 GO terms
LotjaGi2g1v0205700.2
n.a. 40S ribosomal protein S7; TAIR: AT1G48830.1 Ribosomal protein S7e family protein; Swiss-Prot: sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7; TrEMBL-Plants: tr|V7C9Y3|V7C9Y3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0205700 LjG1.1_chr2 64903261 64904651 -
4 domain predictions
3 GO terms
LotjaGi2g1v0205700.3
n.a. 40S ribosomal protein S7; TAIR: AT1G48830.1 Ribosomal protein S7e family protein; Swiss-Prot: sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7; TrEMBL-Plants: tr|V7C9Y3|V7C9Y3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0205700 LjG1.1_chr2 64903261 64904764 -
4 domain predictions
3 GO terms
LotjaGi2g1v0205700.4
n.a. 40S ribosomal protein S7; TAIR: AT1G48830.1 Ribosomal protein S7e family protein; Swiss-Prot: sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7; TrEMBL-Plants: tr|V7C9Y3|V7C9Y3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0205700 LjG1.1_chr2 64903261 64904802 -
4 domain predictions
3 GO terms
LotjaGi4g1v0453500.1
n.a. 40S ribosomal protein S7; TAIR: AT1G48830.1 Ribosomal protein S7e family protein; Swiss-Prot: sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7; TrEMBL-Plants: tr|V7CSN7|V7CSN7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0453500 LjG1.1_chr4 82541859 82543498 +
4 domain predictions
3 GO terms
LotjaGi4g1v0453500.2
n.a. 40S ribosomal protein S7; TAIR: AT1G48830.1 Ribosomal protein S7e family protein; Swiss-Prot: sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7; TrEMBL-Plants: tr|V7CSN7|V7CSN7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0453500 LjG1.1_chr4 82541977 82543498 +
4 domain predictions
3 GO terms