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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001040
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.525s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0296709.1
n.a. PREDICTED: eukaryotic translation initiation factor 4E type 3-like [Glycine max] gi|356498848|ref|XP_003518260.1| chr0 154132354 154134010 +
3 domain predictions
3 GO terms
LotjaGi2g1v0109300.1
n.a. Eukaryotic translation initiation factor 4E; TAIR: AT5G18110.1 Putative cap-binding protein; Swiss-Prot: sp|Q9FK59|IF4E5_ARATH Eukaryotic translation initiation factor NCBP; TrEMBL-Plants: tr|C6SW38|C6SW38_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0109300 LjG1.1_chr2 38024402 38038750 -
3 domain predictions
3 GO terms
LotjaGi2g1v0109300.2
n.a. Eukaryotic translation initiation factor 4E; TAIR: AT5G18110.1 Putative cap-binding protein; Swiss-Prot: sp|A3RCV9|IF4E3_WHEAT Eukaryotic translation initiation factor NCBP; TrEMBL-Plants: tr|I1JD60|I1JD60_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0109300 LjG1.1_chr2 38025524 38037847 -
3 domain predictions
3 GO terms
LotjaGi2g1v0109300.3
n.a. Eukaryotic translation initiation factor 4E; TAIR: AT5G18110.1 Putative cap-binding protein; Swiss-Prot: sp|A3RCV9|IF4E3_WHEAT Eukaryotic translation initiation factor NCBP; TrEMBL-Plants: tr|I1JD60|I1JD60_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0109300 LjG1.1_chr2 38025524 38037940 -
3 domain predictions
3 GO terms
LotjaGi2g1v0109300.4
n.a. Eukaryotic translation initiation factor 4E; TAIR: AT5G18110.1 Putative cap-binding protein; Swiss-Prot: sp|A3RCV9|IF4E3_WHEAT Eukaryotic translation initiation factor NCBP; TrEMBL-Plants: tr|I1JD60|I1JD60_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0109300 LjG1.1_chr2 38025524 38037942 -
3 domain predictions
3 GO terms
LotjaGi6g1v0008200.1
n.a. Eukaryotic translation initiation factor 4E; TAIR: AT5G35620.1 Eukaryotic initiation factor 4E protein; Swiss-Prot: sp|Q03389|IF4E2_WHEAT Eukaryotic translation initiation factor isoform 4E-2; TrEMBL-Plants: tr|I3T1M7|I3T1M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0008200 LjG1.1_chr6 1593309 1597958 -
3 domain predictions
3 GO terms
LotjaGi6g1v0314500.1
n.a. Eukaryotic translation initiation factor 4E; TAIR: AT4G18040.1 eukaryotic translation initiation factor 4E; Swiss-Prot: sp|O23252|IF4E1_ARATH Eukaryotic translation initiation factor 4E-1; TrEMBL-Plants: tr|K0P2S0|K0P2S0_ARAHY Eukaryotic translation initiation factor 4E; Found in the gene: LotjaGi6g1v0314500 LjG1.1_chr6 63258562 63265302 +
3 domain predictions
3 GO terms