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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001078
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.306s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1155540.1
n.a. PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex-like [Glycine max] gi|356498274|ref|XP_003517978.1| chr2 18293212 18296709 -
2 domain predictions
1 GO term
Lj2g3v3185320.1
n.a. PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like [Glycine max] gi|356501546|ref|XP_003519585.1| chr2 40914410 40922829 +
2 domain predictions
1 GO term
Lj3g3v0708180.1
n.a. PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex-like [Cicer arietinum] gi|502120848|ref|XP_004497103.1| chr3 7648954 7650466 -
2 domain predictions
1 GO term
Lj4g3v2309290.1
n.a. PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like [Glycine max] gi|356564223|ref|XP_003550355.1| chr4 32119862 32127826 -
2 domain predictions
1 GO term
Lj5g3v1737080.1
n.a. PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like [Glycine max] gi|356576335|ref|XP_003556288.1| chr5 24917872 24926530 +
2 domain predictions
1 GO term
Lj5g3v1853260.1
n.a. PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like [Glycine max] gi|356576165|ref|XP_003556204.1| chr5 26490955 26494385 +
2 domain predictions
1 GO term
LotjaGi1g1v0026900.1
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT4G26910.1 Dihydrolipoamide succinyltransferase; Swiss-Prot: sp|Q8H107|ODO2B_ARATH Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial; TrEMBL-Plants: tr|A0A1J7GQS7|A0A1J7GQS7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0026900 LjG1.1_chr1 3243197 3251551 -
2 domain predictions
1 GO term
LotjaGi2g1v0157500.1
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G52200.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q0WQF7|ODP21_ARATH Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|I3SH23|I3SH23_LOTJA Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi2g1v0157500 LjG1.1_chr2 55669945 55690710 -
2 domain predictions
1 GO term
LotjaGi2g1v0278200.1
n.a. Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G25860.1 2-oxoacid dehydrogenases acyltransferase family protein; Swiss-Prot: sp|Q9SQI8|ODP24_ARATH Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic; TrEMBL-Plants: tr|I1J6K8|I1J6K8_SOYBN Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi2g1v0278200 LjG1.1_chr2 74992983 74996900 -
2 domain predictions
1 GO term
LotjaGi3g1v0419400.1
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G13930.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q8RWN9|ODP22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A0B2S5Z1|A0A0B2S5Z1_GLYSO Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82669625 82678634 -
2 domain predictions
1 GO term
LotjaGi3g1v0419400.2
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G13930.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q8RWN9|ODP22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A151T9E3|A0A151T9E3_CAJCA Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82669625 82678634 -
2 domain predictions
1 GO term
LotjaGi3g1v0419400.3
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G13930.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q8RWN9|ODP22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A0B2S5Z1|A0A0B2S5Z1_GLYSO Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82669625 82678634 -
2 domain predictions
1 GO term
LotjaGi3g1v0419400.4
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT1G54220.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q5M729|ODP23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A151T9E3|A0A151T9E3_CAJCA Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82670605 82675770 -
2 domain predictions
1 GO term
LotjaGi3g1v0419400.5
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT1G54220.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q5M729|ODP23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A151T9E3|A0A151T9E3_CAJCA Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82670605 82675918 -
2 domain predictions
1 GO term
LotjaGi3g1v0419400.6
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT1G54220.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q5M729|ODP23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A151T9E3|A0A151T9E3_CAJCA Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82670605 82675920 -
2 domain predictions
1 GO term
LotjaGi4g1v0338800.1
n.a. Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G06850.1 2-oxoacid dehydrogenases acyltransferase family protein; Swiss-Prot: sp|Q9M7Z1|ODB2_ARATH Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A072V2G4|A0A072V2G4_MEDTR Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi4g1v0338800 LjG1.1_chr4 71894538 71899043 -
2 domain predictions
1 GO term
LotjaGi5g1v0279000.1
n.a. Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT1G34430.1 2-oxoacid dehydrogenases acyltransferase family protein; Swiss-Prot: sp|Q9C8P0|ODP25_ARATH Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic; TrEMBL-Plants: tr|A0A0S3SNP9|A0A0S3SNP9_PHAAN Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi5g1v0279000 LjG1.1_chr5 59434608 59442702 +
2 domain predictions
1 GO term