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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001141
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.951s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0081349.1
n.a. 60S ribosomal protein L27 [Medicago truncatula] gi|357445373|ref|XP_003592964.1| chr0 31765414 31765540 +
4 domain predictions
3 GO terms
Lj4g3v1260340.1
n.a. PREDICTED: 60S ribosomal protein L27-like [Cicer arietinum] gi|502076821|ref|XP_004485468.1| chr4 18568085 18568679 +
4 domain predictions
3 GO terms
Lj4g3v2691770.1
n.a. ribosomal protein L27 homolog [Pisum sativum] gi|498902|gb|AAA86950.1| chr4 36240539 36241167 -
4 domain predictions
3 GO terms
Lj4g3v2691780.1
n.a. PREDICTED: 60S ribosomal protein L27-like [Cucumis sativus] gi|449460010|ref|XP_004147739.1| chr4 36241139 36241306 -
2 domain predictions
3 GO terms
LotjaGi4g1v0203600.1
n.a. 60S ribosomal protein L27; TAIR: AT3G22230.1 Ribosomal L27e protein family; Swiss-Prot: sp|Q05462|RL27_PEA 60S ribosomal protein L27; TrEMBL-Plants: tr|A0A1J7GJL5|A0A1J7GJL5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0203600 LjG1.1_chr4 47071472 47072385 +
3 domain predictions
3 GO terms
LotjaGi6g1v0243000.1
n.a. 60S ribosomal protein L27; TAIR: AT4G15000.1 Ribosomal L27e protein family; Swiss-Prot: sp|Q05462|RL27_PEA 60S ribosomal protein L27; TrEMBL-Plants: tr|I1MGV6|I1MGV6_SOYBN 60S ribosomal protein L27; Found in the gene: LotjaGi6g1v0243000 LjG1.1_chr6 55546522 55549957 -
3 domain predictions
3 GO terms
LotjaGi6g1v0363100.1
n.a. 60S ribosomal protein L27; TAIR: AT4G15000.1 Ribosomal L27e protein family; Swiss-Prot: sp|Q05462|RL27_PEA 60S ribosomal protein L27; TrEMBL-Plants: tr|I3SZQ1|I3SZQ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0363100 LjG1.1_chr6 67454435 67456888 +
3 domain predictions
3 GO terms