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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001220
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 96 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.280s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0073629.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.5-like [Glycine max] gi|356498420|ref|XP_003518050.1| chr0 27656698 27659079 +
2 domain predictions
1 GO term
Lj0g3v0088019.1
n.a. Lectin receptor-like kinase Tg-20 [Medicago truncatula] gi|357517167|ref|XP_003628872.1| chr0 35898490 35900862 -
2 domain predictions
1 GO term
Lj0g3v0112109.1
n.a. Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404520|pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404521|pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404522|pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)] gi|169404519|pdb|2EIG|A chr0 48759957 48760857 +
2 domain predictions
1 GO term
Lj0g3v0134279.1
n.a. lectin [Robinia pseudoacacia] gi|4115547|dbj|BAA36415.1| chr0 61509135 61510872 +
2 domain predictions
1 GO term
Lj0g3v0193259.1
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356506567|ref|XP_003522051.1| chr0 94452248 94454029 -
2 domain predictions
1 GO term
Lj0g3v0217639.1
n.a. Lectin receptor kinase-like protein [Medicago truncatula] gi|357491803|ref|XP_003616189.1| chr0 110773780 110774222 +
2 domain predictions
1 GO term
Lj0g3v0218539.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.6-like [Glycine max] gi|356534061|ref|XP_003535576.1| chr0 111436780 111437095 +
2 domain predictions
1 GO term
Lj0g3v0247299.1
n.a. Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404520|pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404521|pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404522|pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)] gi|169404519|pdb|2EIG|A chr0 128145265 128145567 -
2 domain predictions
1 GO term
Lj0g3v0254769.1
n.a. lectin [Robinia pseudoacacia] gi|606720|gb|AAA80183.1| chr0 132291627 132292250 +
2 domain predictions
1 GO term
Lj0g3v0254789.1
n.a. lectin-related polypeptide [Robinia pseudoacacia] gi|4115549|dbj|BAA36416.1| chr0 132296341 132297033 +
2 domain predictions
1 GO term
Lj0g3v0298529.1
n.a. Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404520|pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404521|pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404522|pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)] gi|169404519|pdb|2EIG|A chr0 155129678 155131217 +
2 domain predictions
1 GO term
Lj0g3v0304439.1
n.a. RecName: Full=Seed lectin; AltName: Full=LECSJASG; Flags: Precursorgi|1755064|gb|AAB51441.1| lectin precursor [Sophora japonica] gi|3122340|sp|P93535.1|LECS_SOPJA chr0 158574399 158575780 -
2 domain predictions
1 GO term
Lj0g3v0310929.1
n.a. n.a. chr0 162403467 162406443 +
2 domain predictions
1 GO term
Lj0g3v0310949.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max] gi|356496074|ref|XP_003516895.1| chr0 162403467 162406700 -
2 domain predictions
1 GO term
Lj0g3v0333759.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase I.7-like [Cicer arietinum] gi|502146881|ref|XP_004506648.1| chr0 174694932 174696653 -
2 domain predictions
1 GO term
Lj0g3v0333769.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase I.7-like [Cicer arietinum] gi|502146881|ref|XP_004506648.1| chr0 174695234 174696653 -
2 domain predictions
1 GO term
Lj0g3v0334189.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.1-like [Glycine max] gi|356562682|ref|XP_003549598.1| chr0 174899927 174900268 -
2 domain predictions
1 GO term
Lj0g3v0347579.1
n.a. PREDICTED: agglutinin-2-like [Cicer arietinum] gi|502162703|ref|XP_004512588.1| chr0 182380178 182380498 +
2 domain predictions
1 GO term
Lj1g3v1814290.1
n.a. lectin protein, partial [Sophora japonica] gi|431837890|gb|AGA94529.1| chr1 21985713 21986788 +
2 domain predictions
1 GO term
Lj1g3v2372440.1
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356566703|ref|XP_003551569.1| chr1 27925423 27927990 -
2 domain predictions
1 GO term
Lj1g3v2372440.2
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356566703|ref|XP_003551569.1| chr1 27925423 27927990 -
2 domain predictions
1 GO term
Lj1g3v3417740.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Glycine max] gi|356568030|ref|XP_003552217.1| chr1 39427781 39429645 +
2 domain predictions
1 GO term
Lj1g3v5010640.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max] gi|356546735|ref|XP_003541778.1| chr1 60901967 60904367 +
2 domain predictions
1 GO term
Lj2g3v1277870.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max] gi|356567976|ref|XP_003552190.1| chr2 20493641 20496426 +
2 domain predictions
1 GO term
Lj2g3v1467770.1
n.a. PREDICTED: agglutinin-2-like [Cicer arietinum] gi|502154472|ref|XP_004509711.1| chr2 23165539 23166345 -
2 domain predictions
1 GO term
Lj2g3v1467800.1
n.a. PREDICTED: agglutinin-2-like [Cicer arietinum] gi|502154472|ref|XP_004509711.1| chr2 23171094 23171894 -
2 domain predictions
1 GO term
Lj2g3v1573030.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.5-like [Cicer arietinum] gi|502161839|ref|XP_004512301.1| chr2 25004192 25008111 -
2 domain predictions
1 GO term
Lj2g3v2196570.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Glycine max] gi|356551830|ref|XP_003544276.1| chr2 32830957 32833849 -
2 domain predictions
1 GO term
Lj2g3v2196580.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Glycine max] gi|356551830|ref|XP_003544276.1| chr2 32831163 32834338 -
2 domain predictions
1 GO term
Lj2g3v2533290.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Glycine max] gi|356551991|ref|XP_003544355.1| chr2 34985321 34986306 -
2 domain predictions
1 GO term
Lj2g3v2613030.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max] gi|356569356|ref|XP_003552868.1| chr2 35593746 35596407 -
2 domain predictions
1 GO term
Lj2g3v2661820.1
n.a. receptor-like protein kinase [Glycine max] gi|6650223|gb|AAF21775.1|AF068135_1 chr2 35952186 35953244 +
2 domain predictions
1 GO term
Lj2g3v2925190.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.5-like [Cicer arietinum] gi|502161839|ref|XP_004512301.1| chr2 38164573 38167630 +
2 domain predictions
1 GO term
Lj3g3v0339020.1
n.a. lectin protein, partial [Sophora japonica] gi|431837890|gb|AGA94529.1| chr3 2732301 2733704 -
2 domain predictions
1 GO term
Lj3g3v1377980.1
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356506567|ref|XP_003522051.1| chr3 17539725 17542142 -
2 domain predictions
1 GO term
Lj3g3v2320700.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Cucumis sativus] gi|449439978|ref|XP_004137762.1| chr3 29052089 29053753 -
2 domain predictions
1 GO term
Lj3g3v2809410.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase VII.2-like [Glycine max] gi|356547003|ref|XP_003541908.1| chr3 34518533 34520736 -
2 domain predictions
1 GO term
Lj3g3v2809600.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase VII.2-like [Glycine max] gi|356547001|ref|XP_003541907.1| chr3 34531898 34537946 -
2 domain predictions
1 GO term
Lj3g3v2809610.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase VII.2-like [Glycine max] gi|356547001|ref|XP_003541907.1| chr3 34535328 34537946 -
2 domain predictions
1 GO term
Lj4g3v0398310.1
n.a. Lectin receptor-like kinase Tg-20 [Medicago truncatula] gi|357476163|ref|XP_003608367.1| chr4 5124004 5126534 -
2 domain predictions
1 GO term
Lj4g3v0408350.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357476151|ref|XP_003608361.1| chr4 5136049 5138256 -
2 domain predictions
1 GO term
Lj4g3v0408360.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Cicer arietinum] gi|502142402|ref|XP_004504940.1| chr4 5138782 5140866 +
2 domain predictions
1 GO term
Lj4g3v0408370.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357476151|ref|XP_003608361.1| chr4 5140955 5142928 -
2 domain predictions
1 GO term
Lj4g3v0408400.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357476149|ref|XP_003608360.1| chr4 5147425 5148161 -
2 domain predictions
1 GO term
Lj4g3v1440650.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.1-like [Glycine max] gi|356562682|ref|XP_003549598.1| chr4 22284876 22287623 +
2 domain predictions
1 GO term
Lj4g3v2374890.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.6-like [Glycine max] gi|356534061|ref|XP_003535576.1| chr4 32770065 32770826 -
2 domain predictions
1 GO term
Lj4g3v2400950.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max] gi|356569356|ref|XP_003552868.1| chr4 33244880 33245809 -
2 domain predictions
1 GO term
Lj5g3v0510930.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Cicer arietinum] gi|502125091|ref|XP_004498794.1| chr5 5342746 5345213 +
2 domain predictions
1 GO term
Lj5g3v0528900.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.5-like [Cicer arietinum] gi|502161839|ref|XP_004512301.1| chr5 5797521 5800905 +
2 domain predictions
1 GO term
Lj5g3v1726050.1
n.a. Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404520|pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404521|pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404522|pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)] gi|169404519|pdb|2EIG|A chr5 24902886 24903611 -
2 domain predictions
1 GO term