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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001563
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 143 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 5.561s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0081999.1
n.a. PREDICTED: serine carboxypeptidase II-2-like [Cicer arietinum] gi|502087679|ref|XP_004488608.1| chr0 32139323 32144003 -
4 domain predictions
2 GO terms
Lj0g3v0081999.2
n.a. PREDICTED: serine carboxypeptidase II-2-like [Cicer arietinum] gi|502087679|ref|XP_004488608.1| chr0 32139916 32144003 -
4 domain predictions
2 GO terms
Lj0g3v0090599.1
n.a. PREDICTED: serine carboxypeptidase-like 20-like [Cicer arietinum] gi|502155835|ref|XP_004510209.1| chr0 37373089 37378247 -
4 domain predictions
2 GO terms
Lj0g3v0093059.1
n.a. PREDICTED: serine carboxypeptidase-like 50-like [Glycine max] gi|356519762|ref|XP_003528538.1| chr0 38878300 38878971 -
3 domain predictions
2 GO terms
Lj0g3v0093099.1
n.a. PREDICTED: serine carboxypeptidase-like 50-like [Cicer arietinum] gi|502143234|ref|XP_004505268.1| chr0 38879157 38880189 -
4 domain predictions
2 GO terms
Lj0g3v0103249.1
n.a. PREDICTED: serine carboxypeptidase-like 49-like isoform 1 [Glycine max] gi|356534720|ref|XP_003535900.1| chr0 44023162 44040903 +
4 domain predictions
2 GO terms
Lj0g3v0105729.1
n.a. PREDICTED: serine carboxypeptidase-like 48-like isoform X2 [Cicer arietinum] gi|502145515|ref|XP_004506061.1| chr0 45432267 45434721 +
3 domain predictions
2 GO terms
Lj0g3v0105739.1
n.a. PREDICTED: serine carboxypeptidase-like 48-like [Glycine max] gi|356550144|ref|XP_003543449.1| chr0 45436943 45439994 +
4 domain predictions
2 GO terms
Lj0g3v0161419.1
n.a. PREDICTED: serine carboxypeptidase-like 40-like [Glycine max] gi|356542844|ref|XP_003539875.1| chr0 75929433 75932120 -
4 domain predictions
2 GO terms
Lj0g3v0167129.1
n.a. PREDICTED: serine carboxypeptidase-like 49-like [Glycine max] gi|356532601|ref|XP_003534860.1| chr0 79444594 79446283 -
4 domain predictions
2 GO terms
Lj0g3v0167829.1
n.a. PREDICTED: serine carboxypeptidase-like 12-like [Glycine max] gi|356546524|ref|XP_003541676.1| chr0 79896168 79897698 -
3 domain predictions
2 GO terms
Lj0g3v0198339.1
n.a. PREDICTED: serine carboxypeptidase-like 42-like [Cicer arietinum] gi|502171988|ref|XP_004515138.1| chr0 96693548 96698477 -
4 domain predictions
2 GO terms
Lj0g3v0198629.1
n.a. PREDICTED: serine carboxypeptidase-like 31-like [Glycine max] gi|356548767|ref|XP_003542771.1| chr0 96993956 96998546 -
4 domain predictions
2 GO terms
Lj0g3v0212919.1
n.a. PREDICTED: serine carboxypeptidase-like 12-like [Glycine max] gi|356546524|ref|XP_003541676.1| chr0 107413695 107417951 -
4 domain predictions
2 GO terms
Lj0g3v0212919.2
n.a. PREDICTED: serine carboxypeptidase-like 12-like [Glycine max] gi|356546524|ref|XP_003541676.1| chr0 107414994 107417951 -
4 domain predictions
2 GO terms
Lj0g3v0222789.1
n.a. PREDICTED: serine carboxypeptidase-like 42-like, partial [Cucumis sativus] gi|449528889|ref|XP_004171434.1| chr0 114683055 114683709 -
3 domain predictions
2 GO terms
Lj0g3v0236519.1
n.a. Serine carboxypeptidase-like protein [Medicago truncatula] gi|357443345|ref|XP_003591950.1| chr0 122601823 122602072 +
3 domain predictions
2 GO terms
Lj0g3v0278239.1
n.a. PREDICTED: serine carboxypeptidase II-2-like [Cicer arietinum] gi|502087679|ref|XP_004488608.1| chr0 144478701 144480899 -
4 domain predictions
2 GO terms
Lj0g3v0281189.1
n.a. Serine carboxypeptidase [Medicago truncatula] gi|357469301|ref|XP_003604935.1| chr0 145774344 145778609 +
3 domain predictions
2 GO terms
Lj0g3v0281529.1
n.a. PREDICTED: serine carboxypeptidase-like 42-like isoform X2 [Cicer arietinum] gi|502096143|ref|XP_004490638.1| chr0 145947939 145949487 +
3 domain predictions
2 GO terms
Lj0g3v0360619.1
n.a. Serine carboxypeptidase [Medicago truncatula] gi|357469293|ref|XP_003604931.1| chr0 189911674 189916434 +
3 domain predictions
2 GO terms
Lj1g3v1454040.1
n.a. PREDICTED: serine carboxypeptidase-like 45-like [Cicer arietinum] gi|502133380|ref|XP_004501743.1| chr1 17451056 17457742 -
4 domain predictions
2 GO terms
Lj1g3v1454040.3
n.a. PREDICTED: serine carboxypeptidase-like 45-like [Glycine max] gi|356527588|ref|XP_003532390.1| chr1 17451056 17457742 -
4 domain predictions
2 GO terms
Lj1g3v1598100.1
n.a. Serine carboxypeptidase-like protein [Medicago truncatula] gi|357465279|ref|XP_003602921.1| chr1 19168030 19172489 +
3 domain predictions
2 GO terms
Lj1g3v1598100.2
n.a. PREDICTED: serine carboxypeptidase-like 7-like [Glycine max] gi|356514501|ref|XP_003525944.1| chr1 19168030 19169690 +
3 domain predictions
2 GO terms
Lj1g3v1598100.4
n.a. Serine carboxypeptidase-like protein [Medicago truncatula] gi|357465279|ref|XP_003602921.1| chr1 19169852 19172489 +
3 domain predictions
2 GO terms
Lj1g3v2837030.1
n.a. PREDICTED: serine carboxypeptidase-like 20-like isoform 1 [Glycine max] gi|356568501|ref|XP_003552449.1| chr1 32228593 32231129 -
3 domain predictions
2 GO terms
Lj1g3v2837030.2
n.a. PREDICTED: serine carboxypeptidase-like 20-like isoform 1 [Glycine max] gi|356568501|ref|XP_003552449.1| chr1 32228593 32234815 -
4 domain predictions
2 GO terms
Lj1g3v2837030.3
n.a. PREDICTED: serine carboxypeptidase-like 20-like isoform 1 [Glycine max] gi|356568501|ref|XP_003552449.1| chr1 32228593 32234815 -
4 domain predictions
2 GO terms
Lj1g3v3023510.1
n.a. PREDICTED: serine carboxypeptidase-like 25-like isoform 1 [Glycine max] gi|356568736|ref|XP_003552566.1| chr1 34409746 34422768 -
4 domain predictions
2 GO terms
Lj1g3v3137910.1
n.a. PREDICTED: serine carboxypeptidase-like 45-like [Glycine max] gi|356526617|ref|XP_003531913.1| chr1 35764029 35766651 -
4 domain predictions
2 GO terms
Lj1g3v3137910.2
n.a. PREDICTED: serine carboxypeptidase-like 45-like [Glycine max] gi|356526617|ref|XP_003531913.1| chr1 35764029 35767684 -
4 domain predictions
2 GO terms
Lj3g3v0510900.1
n.a. PREDICTED: serine carboxypeptidase-like 12-like [Glycine max] gi|356546524|ref|XP_003541676.1| chr3 5880171 5885348 +
4 domain predictions
2 GO terms
Lj3g3v0824640.1
n.a. PREDICTED: serine carboxypeptidase-like 40-like [Cicer arietinum] gi|502169260|ref|XP_004514571.1| chr3 10126364 10132846 +
4 domain predictions
2 GO terms
Lj3g3v1113160.1
n.a. PREDICTED: serine carboxypeptidase-like 48-like [Glycine max] gi|356543504|ref|XP_003540200.1| chr3 14900713 14904201 -
4 domain predictions
2 GO terms
Lj3g3v1591650.1
n.a. Serine carboxypeptidase [Medicago truncatula] gi|357469293|ref|XP_003604931.1| chr3 20200912 20206079 +
3 domain predictions
2 GO terms
Lj3g3v3026780.1
n.a. PREDICTED: serine carboxypeptidase-like 51-like isoform X2 [Cicer arietinum] gi|502145576|ref|XP_004506087.1| chr3 37813684 37818774 -
4 domain predictions
2 GO terms
Lj3g3v3027830.1
n.a. PREDICTED: serine carboxypeptidase-like 51-like isoform X2 [Cicer arietinum] gi|502145576|ref|XP_004506087.1| chr3 37843306 37848434 -
4 domain predictions
2 GO terms
Lj3g3v3054430.1
n.a. PREDICTED: serine carboxypeptidase-like 49-like [Glycine max] gi|356532601|ref|XP_003534860.1| chr3 38108077 38112488 +
4 domain predictions
2 GO terms
Lj3g3v3056630.1
n.a. PREDICTED: serine carboxypeptidase-like 48-like [Glycine max] gi|356543504|ref|XP_003540200.1| chr3 38169066 38172554 +
4 domain predictions
2 GO terms
Lj3g3v3513790.1
n.a. PREDICTED: serine carboxypeptidase-like 35-like [Glycine max] gi|356544386|ref|XP_003540633.1| chr3 42883217 42893524 +
4 domain predictions
2 GO terms
Lj3g3v3513790.2
n.a. PREDICTED: serine carboxypeptidase-like 35-like [Glycine max] gi|356544386|ref|XP_003540633.1| chr3 42883338 42893524 +
4 domain predictions
2 GO terms
Lj3g3v3527110.1
n.a. PREDICTED: serine carboxypeptidase-like 34-like [Glycine max] gi|356538555|ref|XP_003537768.1| chr3 43008660 43010432 +
3 domain predictions
2 GO terms
Lj3g3v3667630.1
n.a. PREDICTED: serine carboxypeptidase-like 40-like isoform 1 [Glycine max] gi|356531637|ref|XP_003534383.1| chr3 44661212 44667812 +
4 domain predictions
2 GO terms
Lj4g3v0450330.1
n.a. PREDICTED: serine carboxypeptidase-like 31-like [Glycine max] gi|356548767|ref|XP_003542771.1| chr4 6239296 6243871 +
4 domain predictions
2 GO terms
Lj4g3v0450330.2
n.a. PREDICTED: serine carboxypeptidase-like 31-like [Glycine max] gi|356548767|ref|XP_003542771.1| chr4 6241778 6243871 +
3 domain predictions
2 GO terms
Lj4g3v0742810.1
n.a. PREDICTED: serine carboxypeptidase-like 7-like [Glycine max] gi|356514501|ref|XP_003525944.1| chr4 11746631 11750215 +
4 domain predictions
2 GO terms
Lj4g3v1286220.1
n.a. PREDICTED: serine carboxypeptidase II-2-like [Glycine max] gi|356508384|ref|XP_003522937.1| chr4 18886209 18917390 +
3 domain predictions
2 GO terms
Lj4g3v2253550.1
n.a. PREDICTED: serine carboxypeptidase-like 33-like isoform 1 [Glycine max] gi|356521731|ref|XP_003529505.1| chr4 31262205 31265759 +
4 domain predictions
2 GO terms
Lj5g3v0035520.1
n.a. PREDICTED: serine carboxypeptidase II-3-like [Glycine max] gi|356552178|ref|XP_003544446.1| chr5 201216 207981 -
4 domain predictions
2 GO terms