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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002204
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.066s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0336589.1
n.a. Ketose-bisphosphate aldolase class-II family protein isoform 1 [Theobroma cacao] gi|508774096|gb|EOY21352.1| chr0 176288428 176308607 -
2 domain predictions
2 GO terms
Lj0g3v0336589.3
n.a. Ketose-bisphosphate aldolase class-II family protein isoform 2 [Theobroma cacao] gi|508774097|gb|EOY21353.1| chr0 176294090 176308607 -
2 domain predictions
2 GO terms
Lj6g3v1629990.1
n.a. PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like isoform X1 [Cicer arietinum] gi|502080130|ref|XP_004486468.1| chr6 18491602 18496259 +
2 domain predictions
2 GO terms
LotjaGi2g1v0196100.1
n.a. Fructose-bisphosphate aldolase; TAIR: AT1G18270.1 ketose-bisphosphate aldolase class-II family protein; Swiss-Prot: sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ; TrEMBL-Plants: tr|K7L0V1|K7L0V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196100 LjG1.1_chr2 63026704 63048594 +
2 domain predictions
2 GO terms
LotjaGi2g1v0196100.2
n.a. Fructose-bisphosphate aldolase; TAIR: AT1G18270.1 ketose-bisphosphate aldolase class-II family protein; Swiss-Prot: sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ; TrEMBL-Plants: tr|K7L0V1|K7L0V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196100 LjG1.1_chr2 63027027 63048432 +
2 domain predictions
2 GO terms
LotjaGi2g1v0196100.3
n.a. Fructose-bisphosphate aldolase; TAIR: AT1G18270.1 ketose-bisphosphate aldolase class-II family protein; Swiss-Prot: sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ; TrEMBL-Plants: tr|K7L0V1|K7L0V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196100 LjG1.1_chr2 63027027 63048432 +
2 domain predictions
2 GO terms
LotjaGi2g1v0196100.4
n.a. Fructose-bisphosphate aldolase; TAIR: AT1G18270.1 ketose-bisphosphate aldolase class-II family protein; Swiss-Prot: sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ; TrEMBL-Plants: tr|K7L0V1|K7L0V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196100 LjG1.1_chr2 63027027 63048432 +
2 domain predictions
2 GO terms
LotjaGi2g1v0196100.5
n.a. Fructose-bisphosphate aldolase; TAIR: AT1G18270.1 ketose-bisphosphate aldolase class-II family protein; Swiss-Prot: sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ; TrEMBL-Plants: tr|K7L0V1|K7L0V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196100 LjG1.1_chr2 63027027 63048432 +
2 domain predictions
2 GO terms
LotjaGi2g1v0196100.6
n.a. Fructose-bisphosphate aldolase; TAIR: AT1G18270.1 ketose-bisphosphate aldolase class-II family protein; Swiss-Prot: sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ; TrEMBL-Plants: tr|K7L0V1|K7L0V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196100 LjG1.1_chr2 63027027 63048432 +
2 domain predictions
2 GO terms
LotjaGi2g1v0196100.7
n.a. Fructose-bisphosphate aldolase; TAIR: AT1G18270.1 ketose-bisphosphate aldolase class-II family protein; Swiss-Prot: sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ; TrEMBL-Plants: tr|K7L0V1|K7L0V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196100 LjG1.1_chr2 63029308 63048432 +
2 domain predictions
2 GO terms
LotjaGi2g1v0196100.8
n.a. Fructose-bisphosphate aldolase; TAIR: AT1G18270.1 ketose-bisphosphate aldolase class-II family protein; Swiss-Prot: sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ; TrEMBL-Plants: tr|K7L0V1|K7L0V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196100 LjG1.1_chr2 63031418 63048432 +
2 domain predictions
2 GO terms
LotjaGi3g1v0391100.1
n.a. 3-hydroxyisobutyrate dehydrogenase, putative; TAIR: AT3G25530.1 glyoxylate reductase 1; Swiss-Prot: sp|Q9LSV0|GLYR1_ARATH Glyoxylate/succinic semialdehyde reductase 1; TrEMBL-Plants: tr|A0A1J7GPF6|A0A1J7GPF6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0391100 LjG1.1_chr3 78919981 78927978 -
2 domain predictions
2 GO terms
LotjaGi6g1v0270100.1
n.a. 3-hydroxyisobutyrate dehydrogenase; TAIR: AT4G20930.1 6-phosphogluconate dehydrogenase family protein; Swiss-Prot: sp|Q9SUC0|3HIDH_ARATH Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A151T609|A0A151T609_CAJCA 3-hydroxyisobutyrate dehydrogenase; Found in the gene: LotjaGi6g1v0270100 LjG1.1_chr6 58443448 58450006 +
2 domain predictions
2 GO terms