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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003000
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.604s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0163179.1
n.a. PREDICTED: NAD-dependent protein deacetylase SRT2-like [Cicer arietinum] gi|502137108|ref|XP_004502971.1| chr0 77109183 77111816 -
2 domain predictions
1 GO term
Lj0g3v0269569.2
n.a. PREDICTED: NAD-dependent ADP-ribosyltransferase sirtuin-4-like [Glycine max] gi|356518787|ref|XP_003528059.1| chr0 139655645 139656982 +
3 domain predictions
1 GO term
Lj1g3v1356820.1
n.a. PREDICTED: NAD-dependent protein deacetylase SRT2-like [Cicer arietinum] gi|502137108|ref|XP_004502971.1| chr1 16176119 16181635 -
3 domain predictions
1 GO term
Lj6g3v0738970.1
n.a. PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Glycine max] gi|356566429|ref|XP_003551434.1| chr6 6969205 6979905 -
3 domain predictions
1 GO term
Lj6g3v0738970.2
n.a. PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Glycine max] gi|356566429|ref|XP_003551434.1| chr6 6969205 6982123 -
3 domain predictions
1 GO term
Lj6g3v0738970.3
n.a. PREDICTED: NAD-dependent protein deacetylase SRT1-like [Cicer arietinum] gi|502177494|ref|XP_004516096.1| chr6 6973066 6982123 -
3 domain predictions
1 GO term
LotjaGi1g1v0322700.1
n.a. NAD-dependent protein deacylase; TAIR: AT5G09230.1 sirtuin 2; Swiss-Prot: sp|Q94AQ6|SIR4_ARATH NAD-dependent protein deacylase SRT2; TrEMBL-Plants: tr|A0A0S3REZ3|A0A0S3REZ3_PHAAN NAD-dependent protein deacylase; Found in the gene: LotjaGi1g1v0322700 LjG1.1_chr1 77419287 77425298 -
2 domain predictions
1 GO term
LotjaGi6g1v0142500.1
n.a. NAD-dependent protein deacetylase; TAIR: AT5G55760.1 sirtuin 1; Swiss-Prot: sp|Q9FE17|SIR1_ARATH NAD-dependent protein deacetylase SRT1; TrEMBL-Plants: tr|V7BPZ4|V7BPZ4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0142500 LjG1.1_chr6 41189202 41203259 -
2 domain predictions
1 GO term
LotjaGi6g1v0142500.2
n.a. NAD-dependent protein deacetylase; TAIR: AT5G55760.1 sirtuin 1; Swiss-Prot: sp|Q9FE17|SIR1_ARATH NAD-dependent protein deacetylase SRT1; TrEMBL-Plants: tr|V7BPZ4|V7BPZ4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0142500 LjG1.1_chr6 41189701 41200896 -
2 domain predictions
1 GO term