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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006286
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.047s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v2475540.1
n.a. Class I glutamine amidotransferase-like superfamily protein [Theobroma cacao] gi|508711166|gb|EOY03063.1| chr2 34766897 34769137 -
3 domain predictions
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Lj6g3v0353790.1
n.a. Intracellular protease [Medicago truncatula] gi|357460643|ref|XP_003600603.1| chr6 3364597 3370997 -
3 domain predictions
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LotjaGi1g1v0101600.1
n.a. Phosphoribosylformylglycinamidine synthase subunit PurQ; TAIR: AT3G02720.1 Class I glutamine amidotransferase-like superfamily protein; Swiss-Prot: sp|Q9M8R4|DJ1D_ARATH Protein DJ-1 homolog D; TrEMBL-Plants: tr|A0A061EEK5|A0A061EEK5_THECC Class I glutamine amidotransferase-like superfamily protein; Found in the gene: LotjaGi1g1v0101600 LjG1.1_chr1 15475428 15478403 +
3 domain predictions
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LotjaGi6g1v0049800.1
n.a. Phosphoribosylformylglycinamidine synthase subunit PurQ; TAIR: AT3G02720.1 Class I glutamine amidotransferase-like superfamily protein; Swiss-Prot: sp|Q9M8R4|DJ1D_ARATH Protein DJ-1 homolog D; TrEMBL-Plants: tr|G7J7W0|G7J7W0_MEDTR Class I glutamine amidotransferase superfamily protein; Found in the gene: LotjaGi6g1v0049800 LjG1.1_chr6 8970014 8979437 -
3 domain predictions
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LotjaGi6g1v0049800.2
n.a. Phosphoribosylformylglycinamidine synthase subunit PurQ; TAIR: AT3G02720.1 Class I glutamine amidotransferase-like superfamily protein; Swiss-Prot: sp|Q9M8R4|DJ1D_ARATH Protein DJ-1 homolog D; TrEMBL-Plants: tr|G7J7W0|G7J7W0_MEDTR Class I glutamine amidotransferase superfamily protein; Found in the gene: LotjaGi6g1v0049800 LjG1.1_chr6 8975262 8979328 -
3 domain predictions
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