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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006948
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.460s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0318800.1
n.a. Alliin lyase [Medicago truncatula] gi|357461859|ref|XP_003601211.1| chr1 3981892 3994920 -
2 domain predictions
1 GO term
Lj1g3v0318800.2
n.a. Alliin lyase [Medicago truncatula] gi|357461859|ref|XP_003601211.1| chr1 3981892 3994920 -
2 domain predictions
1 GO term
Lj1g3v0329870.1
n.a. Alliin lyase [Medicago truncatula] gi|357461859|ref|XP_003601211.1| chr1 4021460 4021762 -
2 domain predictions
1 GO term
Lj2g3v1415340.1
n.a. Alliin lyase [Medicago truncatula] gi|357485759|ref|XP_003613167.1| chr2 22419318 22423733 +
2 domain predictions
1 GO term
Lj2g3v1415360.1
n.a. PREDICTED: tryptophan aminotransferase 1-like [Glycine max] gi|356497740|ref|XP_003517717.1| chr2 22426165 22429033 +
2 domain predictions
1 GO term
Lj2g3v1415390.1
n.a. Alliin lyase [Medicago truncatula] gi|357485759|ref|XP_003613167.1| chr2 22434369 22437693 +
2 domain predictions
1 GO term
Lj4g3v1451990.1
n.a. PREDICTED: tryptophan aminotransferase-related protein 2-like [Glycine max] gi|356513633|ref|XP_003525516.1| chr4 22453296 22464236 -
2 domain predictions
1 GO term
LotjaGi1g1v0176600.1
n.a. Tryptophan aminotransferase-like protein; TAIR: AT4G24670.1 tryptophan aminotransferase related 2; Swiss-Prot: sp|Q94A02|TAR2_ARATH Tryptophan aminotransferase-related protein 2; TrEMBL-Plants: tr|G7J4U4|G7J4U4_MEDTR Tryptophan aminotransferase-like protein; Found in the gene: LotjaGi1g1v0176600 LjG1.1_chr1 33915059 33928189 -
2 domain predictions
1 GO term
LotjaGi1g1v0176600.2
n.a. Tryptophan aminotransferase-like protein; TAIR: AT4G24670.1 tryptophan aminotransferase related 2; Swiss-Prot: sp|Q94A02|TAR2_ARATH Tryptophan aminotransferase-related protein 2; TrEMBL-Plants: tr|G7J4U4|G7J4U4_MEDTR Tryptophan aminotransferase-like protein; Found in the gene: LotjaGi1g1v0176600 LjG1.1_chr1 33915093 33928144 -
2 domain predictions
1 GO term
LotjaGi2g1v0323700.1
n.a. Tryptophan aminotransferase-like protein; TAIR: AT1G23320.1 tryptophan aminotransferase related 1; Swiss-Prot: sp|Q9LR29|TAR1_ARATH Tryptophan aminotransferase-related protein 1; TrEMBL-Plants: tr|I3SYY6|I3SYY6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0323700 LjG1.1_chr2 79882252 79887526 +
2 domain predictions
1 GO term
LotjaGi2g1v0323800.1
n.a. Tryptophan aminotransferase-like protein; TAIR: AT1G70560.1 tryptophan aminotransferase of Arabidopsis 1; Swiss-Prot: sp|Q9S7N2|TAA1_ARATH L-tryptophan--pyruvate aminotransferase 1; TrEMBL-Plants: tr|I3SYY6|I3SYY6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0323800 LjG1.1_chr2 79897846 79906354 +
2 domain predictions
1 GO term
LotjaGi4g1v0230300.1
n.a. Histidinol-phosphate aminotransferase; TAIR: AT4G24670.1 tryptophan aminotransferase related 2; Swiss-Prot: sp|Q94A02|TAR2_ARATH Tryptophan aminotransferase-related protein 2; TrEMBL-Plants: tr|K7KMS8|K7KMS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0230300 LjG1.1_chr4 54077400 54088079 -
2 domain predictions
1 GO term