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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007188
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.105s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0087059.1
n.a. PREDICTED: actin-related protein 2/3 complex subunit 2-like [Glycine max] gi|356526671|ref|XP_003531940.1| chr0 35257851 35262410 +
3 domain predictions
4 GO terms
Lj0g3v0334299.1
n.a. PREDICTED: actin-related protein 2/3 complex subunit 2-like isoform X1 [Cicer arietinum] gi|502154181|ref|XP_004509613.1| chr0 174979943 174981436 -
3 domain predictions
4 GO terms
Lj6g3v0057850.1
n.a. PREDICTED: probable actin-related protein 2/3 complex subunit 2-like isoform X2 [Cicer arietinum] gi|502122597|ref|XP_004497823.1| chr6 932801 936008 +
3 domain predictions
4 GO terms
LotjaGi4g1v0149700.1
n.a. Actin-related protein 2/3 complex subunit 2; TAIR: AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc; Swiss-Prot: sp|Q8LGI3|ARC2A_ARATH Actin-related protein 2/3 complex subunit 2A; TrEMBL-Plants: tr|I3SIQ2|I3SIQ2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0149700 LjG1.1_chr4 24594898 24614016 +
3 domain predictions
4 GO terms
LotjaGi4g1v0149700.2
n.a. Actin-related protein 2/3 complex subunit 2; TAIR: AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc; Swiss-Prot: sp|Q8LGI3|ARC2A_ARATH Actin-related protein 2/3 complex subunit 2A; TrEMBL-Plants: tr|I3SIQ2|I3SIQ2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0149700 LjG1.1_chr4 24595119 24599828 +
3 domain predictions
4 GO terms
LotjaGi6g1v0008000.1
n.a. Actin-related protein 2/3 complex subunit; TAIR: AT2G33385.2 actin-related protein C2B; Swiss-Prot: sp|F4IVU1|ARC2B_ARATH Actin-related protein 2/3 complex subunit 2B; TrEMBL-Plants: tr|K7LJ90|K7LJ90_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0008000 LjG1.1_chr6 1581741 1587741 +
3 domain predictions
4 GO terms