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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007304
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.317s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0627420.1
n.a. PREDICTED: PP2A regulatory subunit TAP46-like isoform X1 [Cicer arietinum] gi|502136371|ref|XP_004502662.1| chr1 8126233 8128246 +
3 domain predictions
1 GO term
Lj3g3v0537470.1
n.a. PREDICTED: PP2A regulatory subunit TAP46-like [Glycine max] gi|356509245|ref|XP_003523361.1| chr3 6064514 6069372 -
3 domain predictions
1 GO term
LotjaGi1g1v0244700_LC.1
n.a. PP2A regulatory subunit TAP46; TAIR: AT5G53000.1 2A phosphatase associated protein of 46 kD; Swiss-Prot: sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46; TrEMBL-Plants: tr|I1JYQ8|I1JYQ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244700_LC LjG1.1_chr1 58809428 58819975 +
3 domain predictions
1 GO term
LotjaGi4g1v0073200.1
n.a. PP2A regulatory subunit TAP46; TAIR: AT5G53000.1 2A phosphatase associated protein of 46 kD; Swiss-Prot: sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46; TrEMBL-Plants: tr|A0A151RZR7|A0A151RZR7_CAJCA PP2A regulatory subunit TAP46; Found in the gene: LotjaGi4g1v0073200 LjG1.1_chr4 9335911 9343536 +
3 domain predictions
1 GO term
LotjaGi4g1v0073200.2
n.a. PP2A regulatory subunit TAP46; TAIR: AT5G53000.1 2A phosphatase associated protein of 46 kD; Swiss-Prot: sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46; TrEMBL-Plants: tr|A0A151RZR7|A0A151RZR7_CAJCA PP2A regulatory subunit TAP46; Found in the gene: LotjaGi4g1v0073200 LjG1.1_chr4 9338777 9343169 +
3 domain predictions
1 GO term