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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007759
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.650s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0211739.1
n.a. homeodomain-like transcriptional regulator [Arabidopsis thaliana] gi|334188190|ref|NP_001190470.1| chr0 106707389 106718546 -
2 domain predictions
2 GO terms
Lj4g3v0473640.1
n.a. DDT; Homeodomain-related [Medicago truncatula] gi|124360728|gb|ABN08705.1| chr4 7467592 7474076 -
2 domain predictions
2 GO terms
LotjaGi3g1v0242000.1
n.a. Homeobox protein, putative; TAIR: AT5G44180.1 Homeodomain-like transcriptional regulator; Swiss-Prot: sp|Q9FFH1|RLT2_ARATH Homeobox-DDT domain protein RLT2; TrEMBL-Plants: tr|K7KY04|K7KY04_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0242000 LjG1.1_chr3 39299170 39319091 -
2 domain predictions
2 GO terms
LotjaGi4g1v0061500.1
n.a. Homeobox protein, putative; TAIR: AT1G28420.1 homeobox-1; Swiss-Prot: sp|F4HY56|RLT1_ARATH Homeobox-DDT domain protein RLT1; TrEMBL-Plants: tr|A0A0B2PKP8|A0A0B2PKP8_GLYSO Homeobox protein 10; Found in the gene: LotjaGi4g1v0061500 LjG1.1_chr4 7462080 7473349 -
2 domain predictions
2 GO terms
LotjaGi6g1v0328200.1
n.a. Homeobox protein, putative; TAIR: AT1G28420.1 homeobox-1; Swiss-Prot: sp|F4HY56|RLT1_ARATH Homeobox-DDT domain protein RLT1; TrEMBL-Plants: tr|A0A0L9VFB6|A0A0L9VFB6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0328200 LjG1.1_chr6 64324517 64341249 +
2 domain predictions
2 GO terms
LotjaGi6g1v0328200.2
n.a. Homeobox protein, putative; TAIR: AT1G28420.1 homeobox-1; Swiss-Prot: sp|F4HY56|RLT1_ARATH Homeobox-DDT domain protein RLT1; TrEMBL-Plants: tr|A0A0L9VFB6|A0A0L9VFB6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0328200 LjG1.1_chr6 64325210 64336775 +
2 domain predictions
2 GO terms