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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007810
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.441s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v2769380.1
n.a. PREDICTED: vacuolar protein sorting-associated protein 18 homolog [Glycine max] gi|356549956|ref|XP_003543356.1| chr3 34108967 34122655 -
2 domain predictions
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LotjaGi3g1v0440000.1
n.a. Vacuolar protein sorting-associated protein 18 like; TAIR: AT1G12470.1 zinc ion binding protein; Swiss-Prot: sp|P59015|VPS18_DANRE Vacuolar protein sorting-associated protein 18 homolog; TrEMBL-Plants: tr|A0A0R0H958|A0A0R0H958_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0440000 LjG1.1_chr3 85307144 85323667 -
2 domain predictions
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LotjaGi3g1v0440000.2
n.a. Vacuolar protein sorting-associated protein 18 like; TAIR: AT1G12470.1 zinc ion binding protein; Swiss-Prot: sp|P59015|VPS18_DANRE Vacuolar protein sorting-associated protein 18 homolog; TrEMBL-Plants: tr|K7M2S2|K7M2S2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0440000 LjG1.1_chr3 85309584 85323547 -
2 domain predictions
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LotjaGi3g1v0440000.3
n.a. Vacuolar protein sorting-associated protein 18 like; TAIR: AT1G12470.1 zinc ion binding protein; Swiss-Prot: sp|P59015|VPS18_DANRE Vacuolar protein sorting-associated protein 18 homolog; TrEMBL-Plants: tr|K7M2S2|K7M2S2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0440000 LjG1.1_chr3 85309900 85320586 -
2 domain predictions
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