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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008274
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 20 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.367s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0210109.1
n.a. PREDICTED: xanthine dehydrogenase-like [Glycine max] gi|356557392|ref|XP_003547000.1| chr0 105577004 105579011 -
4 domain predictions
2 GO terms
Lj2g3v2925260.1
n.a. PREDICTED: abscisic-aldehyde oxidase-like [Cicer arietinum] gi|502098082|ref|XP_004491151.1| chr2 38198890 38200087 -
4 domain predictions
2 GO terms
Lj2g3v2925270.1
n.a. Aldehyde oxidase [Medicago truncatula] gi|357493525|ref|XP_003617051.1| chr2 38198966 38199544 -
3 domain predictions
2 GO terms
Lj2g3v2925280.1
n.a. Aldehyde oxidase [Medicago truncatula] gi|357493525|ref|XP_003617051.1| chr2 38200048 38201086 -
4 domain predictions
2 GO terms
Lj2g3v2925290.1
n.a. n.a. chr2 38200048 38201086 -
4 domain predictions
2 GO terms
Lj3g3v1694660.1
n.a. PREDICTED: xanthine dehydrogenase 1-like isoform X2 [Cicer arietinum] gi|502081768|ref|XP_004486962.1| chr3 21618391 21625497 -
4 domain predictions
2 GO terms
LotjaGi1g1v0059700.1
n.a. Aldehyde oxidase; TAIR: AT3G43600.1 aldehyde oxidase 2; Swiss-Prot: sp|Q7G192|ALDO2_ARATH Indole-3-acetaldehyde oxidase; TrEMBL-Plants: tr|A0A1J7IPN3|A0A1J7IPN3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0059700 LjG1.1_chr1 8322214 8331842 +
2 domain predictions
2 GO terms
LotjaGi1g1v0059700.2
n.a. Aldehyde oxidase; TAIR: AT3G43600.1 aldehyde oxidase 2; Swiss-Prot: sp|Q7G192|ALDO2_ARATH Indole-3-acetaldehyde oxidase; TrEMBL-Plants: tr|A0A1J7HQY2|A0A1J7HQY2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0059700 LjG1.1_chr1 8322214 8331842 +
2 domain predictions
2 GO terms
LotjaGi1g1v0059900.1
n.a. Aldehyde oxidase; TAIR: AT3G43600.1 aldehyde oxidase 2; Swiss-Prot: sp|Q7G192|ALDO2_ARATH Indole-3-acetaldehyde oxidase; TrEMBL-Plants: tr|K7KB27|K7KB27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0059900 LjG1.1_chr1 8348168 8357495 +
2 domain predictions
2 GO terms
LotjaGi1g1v0059900.2
n.a. Aldehyde oxidase; TAIR: AT3G43600.1 aldehyde oxidase 2; Swiss-Prot: sp|Q7G192|ALDO2_ARATH Indole-3-acetaldehyde oxidase; TrEMBL-Plants: tr|K7KB27|K7KB27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0059900 LjG1.1_chr1 8348335 8356777 +
2 domain predictions
2 GO terms
LotjaGi1g1v0060000.1
n.a. Aldehyde oxidase; TAIR: AT2G27150.1 abscisic aldehyde oxidase 3; Swiss-Prot: sp|Q7G9P4|ALDO3_ARATH Abscisic-aldehyde oxidase; TrEMBL-Plants: tr|K7KB27|K7KB27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0060000 LjG1.1_chr1 8360608 8369978 +
2 domain predictions
2 GO terms
LotjaGi1g1v0060000.2
n.a. Aldehyde oxidase; TAIR: AT2G27150.1 abscisic aldehyde oxidase 3; Swiss-Prot: sp|Q7G9P4|ALDO3_ARATH Abscisic-aldehyde oxidase; TrEMBL-Plants: tr|K7KB27|K7KB27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0060000 LjG1.1_chr1 8360608 8369978 +
2 domain predictions
2 GO terms
LotjaGi1g1v0060000.3
n.a. Aldehyde oxidase; TAIR: AT2G27150.1 abscisic aldehyde oxidase 3; Swiss-Prot: sp|Q7G9P4|ALDO3_ARATH Abscisic-aldehyde oxidase; TrEMBL-Plants: tr|K7KB27|K7KB27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0060000 LjG1.1_chr1 8360627 8369393 +
2 domain predictions
2 GO terms
LotjaGi1g1v0060000.4
n.a. Aldehyde oxidase; TAIR: AT2G27150.1 abscisic aldehyde oxidase 3; Swiss-Prot: sp|Q7G9P4|ALDO3_ARATH Abscisic-aldehyde oxidase; TrEMBL-Plants: tr|K7KB27|K7KB27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0060000 LjG1.1_chr1 8360639 8369316 +
2 domain predictions
2 GO terms
LotjaGi3g1v0288100.1
n.a. Xanthine dehydrogenase; TAIR: AT4G34890.1 xanthine dehydrogenase 1; Swiss-Prot: sp|Q8GUQ8|XDH1_ARATH Xanthine dehydrogenase 1; TrEMBL-Plants: tr|A0A0B2RE38|A0A0B2RE38_GLYSO Xanthine dehydrogenase; Found in the gene: LotjaGi3g1v0288100 LjG1.1_chr3 58227435 58254190 +
2 domain predictions
2 GO terms
LotjaGi3g1v0288100.2
n.a. Xanthine dehydrogenase; TAIR: AT4G34890.1 xanthine dehydrogenase 1; Swiss-Prot: sp|Q8GUQ8|XDH1_ARATH Xanthine dehydrogenase 1; TrEMBL-Plants: tr|A0A0B2RM17|A0A0B2RM17_GLYSO Xanthine dehydrogenase; Found in the gene: LotjaGi3g1v0288100 LjG1.1_chr3 58227765 58253962 +
2 domain predictions
2 GO terms
LotjaGi3g1v0288100.3
n.a. Xanthine dehydrogenase; TAIR: AT4G34890.1 xanthine dehydrogenase 1; Swiss-Prot: sp|Q8GUQ8|XDH1_ARATH Xanthine dehydrogenase 1; TrEMBL-Plants: tr|A0A0B2RM17|A0A0B2RM17_GLYSO Xanthine dehydrogenase; Found in the gene: LotjaGi3g1v0288100 LjG1.1_chr3 58227765 58253962 +
2 domain predictions
2 GO terms
LotjaGi3g1v0288100.4
n.a. Xanthine dehydrogenase; TAIR: AT4G34890.1 xanthine dehydrogenase 1; Swiss-Prot: sp|Q8GUQ8|XDH1_ARATH Xanthine dehydrogenase 1; TrEMBL-Plants: tr|A0A0R0G5H5|A0A0R0G5H5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0288100 LjG1.1_chr3 58227777 58253962 +
2 domain predictions
2 GO terms
LotjaGi3g1v0288100.5
n.a. Xanthine dehydrogenase/oxidase; TAIR: AT4G34890.1 xanthine dehydrogenase 1; Swiss-Prot: sp|Q8GUQ8|XDH1_ARATH Xanthine dehydrogenase 1; TrEMBL-Plants: tr|A0A0B2RM17|A0A0B2RM17_GLYSO Xanthine dehydrogenase; Found in the gene: LotjaGi3g1v0288100 LjG1.1_chr3 58227777 58253962 +
2 domain predictions
2 GO terms
LotjaGi3g1v0288100.6
n.a. Xanthine dehydrogenase; TAIR: AT4G34890.1 xanthine dehydrogenase 1; Swiss-Prot: sp|Q8GUQ8|XDH1_ARATH Xanthine dehydrogenase 1; TrEMBL-Plants: tr|A0A0B2RM17|A0A0B2RM17_GLYSO Xanthine dehydrogenase; Found in the gene: LotjaGi3g1v0288100 LjG1.1_chr3 58227804 58253962 +
2 domain predictions
2 GO terms