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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008656
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 16 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.498s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2095610.1
n.a. inositol phosphate kinase [Glycine max] gi|351721983|ref|NP_001237484.1| chr1 24855963 24860918 +
3 domain predictions
6 GO terms
Lj2g3v1495070.1
n.a. PREDICTED: LOW QUALITY PROTEIN: inositol-tetrakisphosphate 1-kinase 1-like [Glycine max] gi|356497659|ref|XP_003517677.1| chr2 23670409 23672624 +
2 domain predictions
6 GO terms
Lj2g3v1495080.1
n.a. PREDICTED: LOW QUALITY PROTEIN: inositol-tetrakisphosphate 1-kinase 1-like [Glycine max] gi|356497659|ref|XP_003517677.1| chr2 23671126 23671624 +
2 domain predictions
6 GO terms
Lj4g3v1107900.1
n.a. PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Cicer arietinum] gi|502154540|ref|XP_004509737.1| chr4 16413687 16415731 -
2 domain predictions
6 GO terms
Lj4g3v1477230.1
n.a. inositol phosphate kinase [Glycine max] gi|351721472|ref|NP_001237466.1| chr4 22620694 22622133 -
3 domain predictions
6 GO terms
Lj4g3v1882010.1
n.a. PREDICTED: inositol-tetrakisphosphate 1-kinase 4-like [Cicer arietinum] gi|502137619|ref|XP_004503144.1| chr4 26784805 26785425 +
2 domain predictions
6 GO terms
Lj5g3v2063140.1
n.a. PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Glycine max] gi|356574337|ref|XP_003555305.1| chr5 29890656 29896609 -
2 domain predictions
6 GO terms
Lj5g3v2063140.2
n.a. PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Glycine max] gi|356574337|ref|XP_003555305.1| chr5 29890656 29893348 -
2 domain predictions
6 GO terms
Lj5g3v2063140.3
n.a. PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like isoform X4 [Cicer arietinum] gi|502119971|ref|XP_004496803.1| chr5 29893566 29896609 -
2 domain predictions
6 GO terms
LotjaGi1g1v0410900.1
n.a. Inositol-tetrakisphosphate 1-kinase; TAIR: AT4G08170.2 Inositol 1,3,4-trisphosphate 5/6-kinase family protein; Swiss-Prot: sp|Q9SUG3|ITPK3_ARATH Inositol-tetrakisphosphate 1-kinase 3; TrEMBL-Plants: tr|A0A1J7GBR3|A0A1J7GBR3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0410900 LjG1.1_chr1 90139894 90144930 -
3 domain predictions
6 GO terms
LotjaGi1g1v0410900.2
n.a. Inositol-tetrakisphosphate 1-kinase; TAIR: AT4G08170.2 Inositol 1,3,4-trisphosphate 5/6-kinase family protein; Swiss-Prot: sp|Q9SUG3|ITPK3_ARATH Inositol-tetrakisphosphate 1-kinase 3; TrEMBL-Plants: tr|V7AYF3|V7AYF3_PHAVU Inositol-tetrakisphosphate 1-kinase; Found in the gene: LotjaGi1g1v0410900 LjG1.1_chr1 90140854 90144693 -
3 domain predictions
6 GO terms
LotjaGi1g1v0410900.3
n.a. Inositol-tetrakisphosphate 1-kinase; TAIR: AT4G08170.2 Inositol 1,3,4-trisphosphate 5/6-kinase family protein; Swiss-Prot: sp|Q9SUG3|ITPK3_ARATH Inositol-tetrakisphosphate 1-kinase 3; TrEMBL-Plants: tr|A0A1J7GBR3|A0A1J7GBR3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0410900 LjG1.1_chr1 90140854 90144693 -
2 domain predictions
6 GO terms
LotjaGi2g1v0334600.1
n.a. Inositol-tetrakisphosphate 1-kinase; TAIR: AT5G16760.1 Inositol 1,3,4-trisphosphate 5/6-kinase family protein; Swiss-Prot: sp|Q84Y01|ITPK1_MAIZE Inositol-tetrakisphosphate 1-kinase 1; TrEMBL-Plants: tr|A0A151QZC8|A0A151QZC8_CAJCA Inositol-tetrakisphosphate 1-kinase; Found in the gene: LotjaGi2g1v0334600 LjG1.1_chr2 81056063 81060683 +
3 domain predictions
6 GO terms
LotjaGi4g1v0275900.1
n.a. Inositol-tetrakisphosphate 1-kinase, putative; TAIR: AT2G43980.1 inositol 1,3,4-trisphosphate 5/6-kinase 4; Swiss-Prot: sp|O80568|ITPK4_ARATH Inositol 1,3,4-trisphosphate 5/6-kinase 4; TrEMBL-Plants: tr|A0A151U9H2|A0A151U9H2_CAJCA Inositol-tetrakisphosphate 1-kinase 4; Found in the gene: LotjaGi4g1v0275900 LjG1.1_chr4 64623833 64626903 +
2 domain predictions
6 GO terms
LotjaGi4g1v0275900.2
n.a. Inositol-tetrakisphosphate 1-kinase, putative; TAIR: AT2G43980.1 inositol 1,3,4-trisphosphate 5/6-kinase 4; Swiss-Prot: sp|O80568|ITPK4_ARATH Inositol 1,3,4-trisphosphate 5/6-kinase 4; TrEMBL-Plants: tr|A0A151U9H2|A0A151U9H2_CAJCA Inositol-tetrakisphosphate 1-kinase 4; Found in the gene: LotjaGi4g1v0275900 LjG1.1_chr4 64624957 64626432 +
2 domain predictions
6 GO terms
LotjaGi5g1v0319400.1
n.a. Inositol-tetrakisphosphate 1-kinase; TAIR: AT4G08170.2 Inositol 1,3,4-trisphosphate 5/6-kinase family protein; Swiss-Prot: sp|Q9SUG3|ITPK3_ARATH Inositol-tetrakisphosphate 1-kinase 3; TrEMBL-Plants: tr|I1NG48|I1NG48_SOYBN Inositol-tetrakisphosphate 1-kinase; Found in the gene: LotjaGi5g1v0319400 LjG1.1_chr5 63674541 63676908 -
2 domain predictions
6 GO terms