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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011032
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 190 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 6.921s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0023479.1
n.a. PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial-like isoform X1 [Cicer arietinum] gi|502082078|ref|XP_004487059.1| chr0 9375308 9378821 -
3 domain predictions
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Lj0g3v0050139.1
n.a. Alcohol dehydrogenase-like protein [Medicago truncatula] gi|357520233|ref|XP_003630405.1| chr0 17005895 17008797 +
3 domain predictions
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Lj0g3v0062349.1
n.a. PREDICTED: alcohol dehydrogenase-like 7-like [Cicer arietinum] gi|502134046|ref|XP_004501981.1| chr0 20929439 20945266 -
3 domain predictions
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Lj0g3v0062349.2
n.a. PREDICTED: alcohol dehydrogenase-like 7-like [Cicer arietinum] gi|502134046|ref|XP_004501981.1| chr0 20946633 20950022 -
3 domain predictions
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Lj0g3v0071329.1
n.a. PREDICTED: alcohol dehydrogenase class-3-like [Cicer arietinum] gi|502114773|ref|XP_004495047.1| chr0 26112440 26116661 -
3 domain predictions
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Lj0g3v0079449.1
n.a. PREDICTED: (+)-pulegone reductase-like [Glycine max] gi|356543702|ref|XP_003540299.1| chr0 30732988 30735498 +
3 domain predictions
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Lj0g3v0113329.1
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X2 [Cicer arietinum] gi|502090108|ref|XP_004489123.1| chr0 49500390 49500913 +
3 domain predictions
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Lj0g3v0149379.1
n.a. alcohol dehydrogenase family-1 [Oryza coarctata] gi|240252444|gb|ACS49642.1| chr0 69287572 69292662 +
3 domain predictions
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Lj0g3v0187119.1
n.a. PREDICTED: (+)-pulegone reductase-like [Glycine max] gi|356543702|ref|XP_003540299.1| chr0 91291047 91291623 +
3 domain predictions
 –
Lj0g3v0207999.1
n.a. n.a. chr0 104104649 104105982 +
2 domain predictions
 –
Lj0g3v0207999.2
n.a. PREDICTED: alcohol dehydrogenase-like 7-like isoform 1 [Glycine max] gi|356574454|ref|XP_003555362.1| chr0 104104649 104105982 +
2 domain predictions
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Lj0g3v0210839.1
n.a. PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like [Glycine max] gi|356544066|ref|XP_003540476.1| chr0 106078139 106083805 +
3 domain predictions
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Lj0g3v0228979.1
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Cicer arietinum] gi|502086897|ref|XP_004488361.1| chr0 118462949 118465431 -
3 domain predictions
 –
Lj0g3v0288919.1
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Cicer arietinum] gi|502086897|ref|XP_004488361.1| chr0 150090516 150092428 +
3 domain predictions
 –
Lj0g3v0288919.2
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Glycine max] gi|356517014|ref|XP_003527185.1| chr0 150090516 150096423 +
3 domain predictions
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Lj0g3v0339299.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max] gi|356526809|ref|XP_003532009.1| chr0 177718250 177721557 -
3 domain predictions
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Lj0g3v0353399.1
n.a. alcohol dehydrogenase [Lotus japonicus] gi|356582742|gb|AET21261.1| chr0 186011765 186013900 -
3 domain predictions
 –
Lj1g3v0268510.1
n.a. PREDICTED: alcohol dehydrogenase 1 [Glycine max] gi|356554664|ref|XP_003545664.1| chr1 2976287 2978991 -
3 domain predictions
 –
Lj1g3v0913270.1
n.a. alcohol dehydrogenase [Lotus japonicus] gi|356582742|gb|AET21261.1| chr1 11649553 11652641 +
3 domain predictions
 –
Lj1g3v0913280.1
n.a. alcohol dehydrogenase [Lotus japonicus] gi|356582742|gb|AET21261.1| chr1 11650117 11652706 +
3 domain predictions
 –
Lj1g3v1112850.1
n.a. PREDICTED: quinone oxidoreductase-like protein 2 homolog [Glycine max] gi|356509112|ref|XP_003523296.1| chr1 13927776 13931476 +
3 domain predictions
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Lj1g3v2315430.1
n.a. PREDICTED: alcohol dehydrogenase-like 3-like isoform X1 [Cicer arietinum] gi|502104095|ref|XP_004492437.1| chr1 27394314 27405955 +
3 domain predictions
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Lj1g3v3328890.1
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X1 [Cicer arietinum] gi|502090104|ref|XP_004489122.1| chr1 37377704 37382459 +
3 domain predictions
 –
Lj1g3v3328890.2
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X1 [Cicer arietinum] gi|502090104|ref|XP_004489122.1| chr1 37379287 37382459 +
3 domain predictions
 –
Lj1g3v3580590.2
n.a. Quinone-oxidoreductase-like protein [Medicago truncatula] gi|357505171|ref|XP_003622874.1| chr1 41109997 41114047 +
3 domain predictions
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Lj1g3v3641800.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max] gi|356571369|ref|XP_003553850.1| chr1 41841020 41841859 +
3 domain predictions
 –
Lj1g3v3641820.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] gi|502173904|ref|XP_004515401.1| chr1 41841861 41843762 +
2 domain predictions
 –
Lj1g3v3641840.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] gi|502173904|ref|XP_004515401.1| chr1 41846105 41849379 +
3 domain predictions
 –
Lj1g3v3641870.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max] gi|356571378|ref|XP_003553854.1| chr1 41860010 41861299 +
3 domain predictions
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Lj1g3v3979340.1
n.a. Alcohol dehydrogenase class-3 [Medicago truncatula] gi|357487763|ref|XP_003614169.1| chr1 47284995 47287627 -
3 domain predictions
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Lj1g3v4105870.1
n.a. 10 kDa chaperonin [Medicago truncatula] gi|357509315|ref|XP_003624946.1| chr1 48712916 48714501 -
2 domain predictions
 –
Lj1g3v4528570.1
n.a. PREDICTED: alcohol dehydrogenase class-3-like [Cicer arietinum] gi|502110273|ref|XP_004493841.1| chr1 53412429 53415790 -
3 domain predictions
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Lj2g3v0549950.1
n.a. PREDICTED: L-idonate 5-dehydrogenase-like [Glycine max] gi|356559880|ref|XP_003548224.1| chr2 7359048 7359813 +
3 domain predictions
 –
Lj2g3v0561220.1
n.a. PREDICTED: alcohol dehydrogenase-like 6-like [Glycine max] gi|356531015|ref|XP_003534074.1| chr2 7515642 7536185 +
3 domain predictions
 –
Lj2g3v0561220.2
n.a. PREDICTED: alcohol dehydrogenase-like 6-like [Glycine max] gi|356531015|ref|XP_003534074.1| chr2 7515642 7525283 +
3 domain predictions
 –
Lj2g3v1014110.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] gi|502090613|ref|XP_004489284.1| chr2 15469697 15471403 +
3 domain predictions
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Lj2g3v1467620.1
n.a. Mannitol dehydrogenase [Medicago truncatula] gi|357485383|ref|XP_003612979.1| chr2 23113957 23115885 -
3 domain predictions
 –
Lj2g3v1467620.2
n.a. Cinnamyl alcohol dehydrogenase [Medicago truncatula] gi|357485403|ref|XP_003612989.1| chr2 23113957 23115066 -
3 domain predictions
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Lj2g3v1467630.1
n.a. PREDICTED: probable mannitol dehydrogenase-like [Cicer arietinum] gi|502162632|ref|XP_004512563.1| chr2 23119243 23121973 +
3 domain predictions
 –
Lj2g3v1467630.2
n.a. Geraniol dehydrogenase 1 [Theobroma cacao] gi|508699991|gb|EOX91887.1| chr2 23119610 23121973 +
3 domain predictions
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Lj2g3v2970670.1
n.a. PREDICTED: alcohol dehydrogenase-like 7-like isoform 1 [Glycine max] gi|356554319|ref|XP_003545495.1| chr2 38374527 38380339 -
3 domain predictions
 –
Lj2g3v2971690.1
n.a. PREDICTED: alcohol dehydrogenase-like 7-like isoform 1 [Glycine max] gi|356574454|ref|XP_003555362.1| chr2 38388838 38390223 +
2 domain predictions
 –
Lj3g3v0463530.1
n.a. PREDICTED: quinone oxidoreductase 1-like [Glycine max] gi|356544208|ref|XP_003540546.1| chr3 5302913 5305882 +
3 domain predictions
 –
Lj3g3v0463550.1
n.a. PREDICTED: quinone oxidoreductase 1-like [Glycine max] gi|356544208|ref|XP_003540546.1| chr3 5310474 5311759 +
3 domain predictions
 –
Lj3g3v0463550.2
n.a. PREDICTED: quinone oxidoreductase 1-like [Glycine max] gi|356544208|ref|XP_003540546.1| chr3 5310474 5311759 +
3 domain predictions
 –
Lj3g3v0463550.3
n.a. PREDICTED: quinone oxidoreductase 1-like [Glycine max] gi|356544208|ref|XP_003540546.1| chr3 5310474 5311759 +
3 domain predictions
 –
Lj3g3v0615870.1
n.a. Quinone-oxidoreductase-like protein [Medicago truncatula] gi|357470795|ref|XP_003605682.1| chr3 6634693 6638828 -
3 domain predictions
 –
Lj3g3v0615870.3
n.a. Quinone-oxidoreductase-like protein [Medicago truncatula] gi|357470795|ref|XP_003605682.1| chr3 6637807 6638828 -
3 domain predictions
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Lj3g3v0642510.1
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Glycine max] gi|356504476|ref|XP_003521022.1| chr3 6922458 6925489 +
3 domain predictions
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Lj3g3v0642510.2
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Glycine max] gi|356504476|ref|XP_003521022.1| chr3 6922458 6941029 +
3 domain predictions
 –