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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011556
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.076s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v2951270.1
n.a. gamma-glutamylcysteine synthetase [Lotus japonicus] gi|34484367|gb|AAO45821.1| chr4 39124726 39131784 -
2 domain predictions
2 GO terms
Lj4g3v2951280.1
n.a. n.a. chr4 39124790 39131895 -
2 domain predictions
2 GO terms
LotjaGi2g1v0434100.1
n.a. glutamate-cysteine ligase; TAIR: AT4G23100.1 glutamate-cysteine ligase; Swiss-Prot: sp|P46309|GSH1_ARATH Glutamate--cysteine ligase, chloroplastic; TrEMBL-Plants: tr|G7KC28|G7KC28_MEDTR Glutamate-cysteine ligase B; Found in the gene: LotjaGi2g1v0434100 LjG1.1_chr2 93067903 93071963 -
2 domain predictions
2 GO terms
LotjaGi4g1v0425600.4
n.a. Glutamate--cysteine ligase, chloroplastic; TAIR: AT4G23100.1 glutamate-cysteine ligase; Swiss-Prot: sp|Q9ZNX6|GSH1_MEDTR Glutamate--cysteine ligase, chloroplastic; TrEMBL-Plants: tr|Q6XXZ2|Q6XXZ2_LOTJA Gamma-glutamylcysteine synthetase; Found in the gene: LotjaGi4g1v0425600 LjG1.1_chr4 80043160 80049718 -
3 domain predictions
2 GO terms
LotjaGi4g1v0425600.5
n.a. Glutamate--cysteine ligase, chloroplastic; TAIR: AT4G23100.1 glutamate-cysteine ligase; Swiss-Prot: sp|Q9ZNX6|GSH1_MEDTR Glutamate--cysteine ligase, chloroplastic; TrEMBL-Plants: tr|Q6XXZ2|Q6XXZ2_LOTJA Gamma-glutamylcysteine synthetase; Found in the gene: LotjaGi4g1v0425600 LjG1.1_chr4 80043160 80049724 -
3 domain predictions
2 GO terms