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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR012400
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.037s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0063329.1
n.a. RecName: Full=Long-chain-alcohol oxidase FAO1; AltName: Full=Long-chain fatty alcohol oxidase 1gi|209570220|emb|CAP15762.1| long chain fatty alcohol oxidase FAO1 [Lotus japonicus] gi|300680944|sp|B5WWZ8.1|FAO1_LOTJA chr0 21462686 21466786 +
2 domain predictions
2 GO terms
Lj0g3v0063339.1
n.a. RecName: Full=Long-chain-alcohol oxidase FAO1; AltName: Full=Long-chain fatty alcohol oxidase 1gi|209570220|emb|CAP15762.1| long chain fatty alcohol oxidase FAO1 [Lotus japonicus] gi|300680944|sp|B5WWZ8.1|FAO1_LOTJA chr0 21462978 21466631 +
2 domain predictions
2 GO terms
Lj1g3v4515670.1
n.a. RecName: Full=Long-chain-alcohol oxidase FAO2; AltName: Full=Long-chain fatty alcohol oxidase 2gi|209570222|emb|CAP15763.1| long chain fatty alcohol oxidase FAO2 [Lotus japonicus] gi|300680945|sp|B5WWZ9.1|FAO2_LOTJA chr1 53039210 53042790 +
2 domain predictions
2 GO terms
Lj2g3v1550530.1
n.a. PREDICTED: long-chain-alcohol oxidase FAO4A-like [Glycine max] gi|356496483|ref|XP_003517097.1| chr2 24747750 24755478 +
2 domain predictions
2 GO terms
LotjaGi1g1v0706600.1
n.a. Long-chain-alcohol oxidase; TAIR: AT4G28570.1 Long-chain fatty alcohol dehydrogenase family protein; Swiss-Prot: sp|B5WWZ9|FAO2_LOTJA Long-chain-alcohol oxidase FAO2; TrEMBL-Plants: tr|A0A0B2P496|A0A0B2P496_GLYSO Long-chain-alcohol oxidase; Found in the gene: LotjaGi1g1v0706600 LjG1.1_chr1 127487959 127492331 -
2 domain predictions
2 GO terms
LotjaGi1g1v0706600.2
n.a. Long-chain-alcohol oxidase; TAIR: AT4G28570.1 Long-chain fatty alcohol dehydrogenase family protein; Swiss-Prot: sp|B5WWZ9|FAO2_LOTJA Long-chain-alcohol oxidase FAO2; TrEMBL-Plants: tr|A0A0B2P496|A0A0B2P496_GLYSO Long-chain-alcohol oxidase; Found in the gene: LotjaGi1g1v0706600 LjG1.1_chr1 127488216 127492241 -
2 domain predictions
2 GO terms
LotjaGi2g1v0348200.1
n.a. Long-chain-alcohol oxidase; TAIR: AT4G19380.2 Long-chain fatty alcohol dehydrogenase family protein; Swiss-Prot: sp|O65709|FAO4A_ARATH Long-chain-alcohol oxidase FAO4A; TrEMBL-Plants: tr|G7K421|G7K421_MEDTR Long-chain-alcohol oxidase FAO1-like protein; Found in the gene: LotjaGi2g1v0348200 LjG1.1_chr2 82487701 82495934 +
2 domain predictions
2 GO terms
LotjaGi3g1v0148100.1
n.a. Long-chain-alcohol oxidase; TAIR: AT3G23410.1 fatty alcohol oxidase 3; Swiss-Prot: sp|B5WWZ8|FAO1_LOTJA Long-chain-alcohol oxidase FAO1; TrEMBL-Plants: tr|I1LSK5|I1LSK5_SOYBN Long-chain-alcohol oxidase; Found in the gene: LotjaGi3g1v0148100 LjG1.1_chr3 19935882 19940305 +
2 domain predictions
2 GO terms
LotjaGi4g1v0142500.1
n.a. Long-chain-alcohol oxidase; TAIR: AT4G19380.2 Long-chain fatty alcohol dehydrogenase family protein; Swiss-Prot: sp|O65709|FAO4A_ARATH Long-chain-alcohol oxidase FAO4A; TrEMBL-Plants: tr|G7L7T8|G7L7T8_MEDTR Long-chain-alcohol oxidase FAO1-like protein; Found in the gene: LotjaGi4g1v0142500 LjG1.1_chr4 22031495 22041938 -
2 domain predictions
2 GO terms
LotjaGi4g1v0142500.2
n.a. Long-chain-alcohol oxidase; TAIR: AT4G19380.1 Long-chain fatty alcohol dehydrogenase family protein; Swiss-Prot: sp|O65709|FAO4A_ARATH Long-chain-alcohol oxidase FAO4A; TrEMBL-Plants: tr|G7L7T8|G7L7T8_MEDTR Long-chain-alcohol oxidase FAO1-like protein; Found in the gene: LotjaGi4g1v0142500 LjG1.1_chr4 22032519 22040446 -
2 domain predictions
2 GO terms
LotjaGi5g1v0188900.1
n.a. Long-chain-alcohol oxidase; TAIR: AT3G23410.1 fatty alcohol oxidase 3; Swiss-Prot: sp|B5WWZ8|FAO1_LOTJA Long-chain-alcohol oxidase FAO1; TrEMBL-Plants: tr|A0A0R0HV52|A0A0R0HV52_SOYBN Long-chain-alcohol oxidase; Found in the gene: LotjaGi5g1v0188900 LjG1.1_chr5 47801234 47813374 -
2 domain predictions
2 GO terms