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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR017919
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.448s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0198759.3
n.a. PREDICTED: general transcription factor IIE subunit 1-like [Cicer arietinum] gi|502151714|ref|XP_004508577.1| chr0 97215986 97220868 -
2 domain predictions
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Lj0g3v0243579.1
n.a. PREDICTED: general transcription factor IIE subunit 1-like [Cicer arietinum] gi|502151714|ref|XP_004508577.1| chr0 126357693 126358882 -
2 domain predictions
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Lj4g3v0599890.1
n.a. PREDICTED: general transcription factor IIE subunit 1-like [Cicer arietinum] gi|502151714|ref|XP_004508577.1| chr4 9339573 9342033 -
2 domain predictions
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LotjaGi1g1v0346400.1
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|Q557M8|T2EA_DICDI General transcription factor IIE subunit 1; TrEMBL-Plants: tr|A0A0S3R7K1|A0A0S3R7K1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0346400 LjG1.1_chr1 81348914 81358145 -
2 domain predictions
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LotjaGi2g1v0144100_LC.2
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|I1K1A1|I1K1A1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0144100_LC LjG1.1_chr2 52234312 52256200 +
2 domain predictions
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LotjaGi2g1v0144100_LC.4
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|Q9D0D5|T2EA_MOUSE General transcription factor IIE subunit 1; TrEMBL-Plants: tr|I1K1A1|I1K1A1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0144100_LC LjG1.1_chr2 52234361 52235930 +
2 domain predictions
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LotjaGi2g1v0144100_LC.5
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|I1K1A1|I1K1A1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0144100_LC LjG1.1_chr2 52234421 52248922 +
2 domain predictions
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LotjaGi2g1v0144100_LC.6
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|I1K1A1|I1K1A1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0144100_LC LjG1.1_chr2 52234421 52248922 +
2 domain predictions
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LotjaGi2g1v0144100_LC.8
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|I1K1A1|I1K1A1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0144100_LC LjG1.1_chr2 52234421 52249095 +
2 domain predictions
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LotjaGi2g1v0144100_LC.9
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|I1K1A1|I1K1A1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0144100_LC LjG1.1_chr2 52234421 52249098 +
2 domain predictions
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LotjaGi4g1v0074700.1
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|A0A0S3R7K1|A0A0S3R7K1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0074700 LjG1.1_chr4 9544222 9555257 -
2 domain predictions
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LotjaGi4g1v0074700.2
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|I1MUG7|I1MUG7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0074700 LjG1.1_chr4 9545139 9554936 -
2 domain predictions
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LotjaGi4g1v0074700.3
n.a. Transcription initiation factor IIE subunit alpha; TAIR: AT1G03280.1 Transcription factor TFIIE, alpha subunit; Swiss-Prot: sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha; TrEMBL-Plants: tr|I1MUG7|I1MUG7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0074700 LjG1.1_chr4 9546485 9554936 -
2 domain predictions
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