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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019368
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.869s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0197869.1
n.a. PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Glycine max] gi|356539682|ref|XP_003538324.1| chr0 96415753 96416217 -
2 domain predictions
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LotjaGi2g1v0229600_LC.1
n.a. Mitochondrial 28S ribosomal protein S29-related; TAIR: AT1G16870.1 mitochondrial 28S ribosomal protein S29-like protein; Swiss-Prot: sp|P82922|RT29_BOVIN 28S ribosomal protein S29, mitochondrial; TrEMBL-Plants: tr|A0A0L9VDC0|A0A0L9VDC0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0229600_LC LjG1.1_chr2 68811957 68820207 +
3 domain predictions
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LotjaGi2g1v0229800_LC.1
n.a. 28S ribosomal protein S29, mitochondrial; TAIR: AT1G16870.1 mitochondrial 28S ribosomal protein S29-like protein; Swiss-Prot: sp|Q9SR06|CLP1_ARATH Protein CLP1 homolog; TrEMBL-Plants: tr|A0A0L9VDC0|A0A0L9VDC0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0229800_LC LjG1.1_chr2 68822143 68830873 +
3 domain predictions
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LotjaGi2g1v0229800_LC.2
n.a. 28S ribosomal protein S29, mitochondrial; TAIR: AT1G16870.1 mitochondrial 28S ribosomal protein S29-like protein; Swiss-Prot: sp|P51398|RT29_HUMAN 28S ribosomal protein S29, mitochondrial; TrEMBL-Plants: tr|G7J0M5|G7J0M5_MEDTR 28S ribosomal protein S29; Found in the gene: LotjaGi2g1v0229800_LC LjG1.1_chr2 68822143 68830873 +
3 domain predictions
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LotjaGi2g1v0229800_LC.3
n.a. 28S ribosomal protein S29, mitochondrial; TAIR: AT1G16870.1 mitochondrial 28S ribosomal protein S29-like protein; Swiss-Prot: sp|P51398|RT29_HUMAN 28S ribosomal protein S29, mitochondrial; TrEMBL-Plants: tr|G7J0M5|G7J0M5_MEDTR 28S ribosomal protein S29; Found in the gene: LotjaGi2g1v0229800_LC LjG1.1_chr2 68827111 68830768 +
3 domain predictions
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LotjaGi6g1v0106000.1
n.a. Mitochondrial 28S ribosomal protein S29-related; TAIR: AT1G16870.1 mitochondrial 28S ribosomal protein S29-like protein; Swiss-Prot: sp|P51398|RT29_HUMAN 28S ribosomal protein S29, mitochondrial; TrEMBL-Plants: tr|G7J0M5|G7J0M5_MEDTR 28S ribosomal protein S29; Found in the gene: LotjaGi6g1v0106000 LjG1.1_chr6 23727800 23731478 +
3 domain predictions
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