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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019927
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.562s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0055339.1
n.a. PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Glycine max] gi|356507166|ref|XP_003522341.1| chr0 17847299 17849124 -
4 domain predictions
3 GO terms
Lj3g3v2737570.1
n.a. PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502099927|ref|XP_004491593.1| chr3 33828612 33832107 -
4 domain predictions
3 GO terms
Lj3g3v2737570.2
n.a. PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502099927|ref|XP_004491593.1| chr3 33829846 33832107 -
3 domain predictions
3 GO terms
LotjaGi1g1v0557000.1
n.a. 50S ribosomal protein L3; TAIR: AT2G43030.1 Ribosomal protein L3 family protein; Swiss-Prot: sp|O80360|RK3_TOBAC 50S ribosomal protein L3, chloroplastic; TrEMBL-Plants: tr|I3SYM4|I3SYM4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0557000 LjG1.1_chr1 108889914 108892134 -
4 domain predictions
3 GO terms
LotjaGi3g1v0145400_LC.1
n.a. 50S ribosomal protein L3; TAIR: AT2G43030.1 Ribosomal protein L3 family protein; Swiss-Prot: sp|Q9SKX4|RK3A_ARATH 50S ribosomal protein L3-1, chloroplastic; TrEMBL-Plants: tr|A0A0B2RNC8|A0A0B2RNC8_GLYSO 50S ribosomal protein L3-1, chloroplastic; Found in the gene: LotjaGi3g1v0145400_LC LjG1.1_chr3 19344836 19345716 -
2 domain predictions
3 GO terms
LotjaGi3g1v0435200.1
n.a. 50S ribosomal protein L3, putative; TAIR: AT3G17465.1 ribosomal protein L3 plastid; Swiss-Prot: sp|Q9LRN8|RK3B_ARATH 50S ribosomal protein L3-2, chloroplastic; TrEMBL-Plants: tr|A0A151SVP2|A0A151SVP2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0435200 LjG1.1_chr3 84657689 84662280 -
4 domain predictions
3 GO terms
LotjaGi3g1v0435200.2
n.a. 50S ribosomal protein L3, putative; TAIR: AT3G17465.1 ribosomal protein L3 plastid; Swiss-Prot: sp|Q9LRN8|RK3B_ARATH 50S ribosomal protein L3-2, chloroplastic; TrEMBL-Plants: tr|I3T9M7|I3T9M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0435200 LjG1.1_chr3 84658942 84659904 -
2 domain predictions
3 GO terms
LotjaGi3g1v0435200.3
n.a. 50S ribosomal protein L3, putative; TAIR: AT3G17465.1 ribosomal protein L3 plastid; Swiss-Prot: sp|Q9LRN8|RK3B_ARATH 50S ribosomal protein L3-2, chloroplastic; TrEMBL-Plants: tr|A0A151SVP2|A0A151SVP2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0435200 LjG1.1_chr3 84658942 84661953 -
4 domain predictions
3 GO terms