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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019979
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.614s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v0247260.1
n.a. 30S ribosomal protein S17 [Medicago truncatula] gi|357454921|ref|XP_003597741.1| chr3 1462917 1464556 +
2 domain predictions
3 GO terms
Lj4g3v1971910.1
n.a. 40S ribosomal protein S11 [Arabidopsis lyrata subsp]. lyrata] gi|297802956|ref|XP_002869362.1| chr4 27370995 27372802 +
2 domain predictions
3 GO terms
Lj5g3v2241460.3
n.a. PREDICTED: 40S ribosomal protein S11 [Vitis vinifera] gi|225463039|ref|XP_002267523.1| chr5 32455143 32456658 +
2 domain predictions
3 GO terms
LotjaGi4g1v0282000.1
n.a. 30S ribosomal protein S17; TAIR: AT5G23740.1 ribosomal protein S11-beta; Swiss-Prot: sp|P17093|RS11_SOYBN 40S ribosomal protein S11; TrEMBL-Plants: tr|I3TA88|I3TA88_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0282000 LjG1.1_chr4 65323759 65326410 +
2 domain predictions
3 GO terms
LotjaGi5g1v0347800.1
n.a. 30S ribosomal protein S17; TAIR: AT5G23740.1 ribosomal protein S11-beta; Swiss-Prot: sp|Q9M5M1|RS11_EUPES 40S ribosomal protein S11; TrEMBL-Plants: tr|I3SEW9|I3SEW9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0347800 LjG1.1_chr5 66398677 66401998 +
2 domain predictions
3 GO terms
LotjaGi5g1v0348100.1
n.a. 30S ribosomal protein S17; TAIR: AT5G23740.1 ribosomal protein S11-beta; Swiss-Prot: sp|Q9M5M1|RS11_EUPES 40S ribosomal protein S11; TrEMBL-Plants: tr|I3SEW9|I3SEW9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0348100 LjG1.1_chr5 66408657 66410586 +
2 domain predictions
3 GO terms