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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019984
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 3 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.393s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v0247260.1
n.a. 30S ribosomal protein S17 [Medicago truncatula] gi|357454921|ref|XP_003597741.1| chr3 1462917 1464556 +
2 domain predictions
3 GO terms
LotjaGi3g1v0199000.1
n.a. 30S ribosomal S17-like protein; TAIR: AT1G49400.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|B1I1J7|RS17_DESAP 30S ribosomal protein S17; TrEMBL-Plants: tr|I3SZP5|I3SZP5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0199000 LjG1.1_chr3 29080313 29080726 +
3 domain predictions
3 GO terms
LotjaGi4g1v0014700.2
n.a. 30S ribosomal protein S17; TAIR: AT1G49400.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|B1I1J7|RS17_DESAP 30S ribosomal protein S17; TrEMBL-Plants: tr|I3S3D8|I3S3D8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0014700 LjG1.1_chr4 1845258 1845671 +
3 domain predictions
3 GO terms