Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR020846
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 612 results. Now displaying 1 of 13 with 50 rows per page. This search has taken 6.341s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0003149.1
n.a. phosphate transporter 5 [Astragalus sinicus] gi|407911912|gb|AFU50504.1| chr0 1131293 1134500 +
4 domain predictions
1 GO term
Lj0g3v0003819.1
n.a. nodule-specific protein Nlj70 [Lotus japonicus] gi|3329366|gb|AAC39500.1| chr0 1347954 1351041 +
2 domain predictions
1 GO term
Lj0g3v0003829.1
n.a. nodule-specific protein Nlj70 [Lotus japonicus] gi|3329366|gb|AAC39500.1| chr0 1348642 1350711 +
2 domain predictions
1 GO term
Lj0g3v0008909.1
n.a. hexose transporter 1 [Juglans regia] gi|68271836|gb|AAY89231.1| chr0 3616800 3618572 +
4 domain predictions
1 GO term
Lj0g3v0021189.1
n.a. PREDICTED: peptide transporter PTR5-like isoform X1 [Cicer arietinum] gi|502129218|ref|XP_004500227.1| chr0 8605173 8607139 +
3 domain predictions
1 GO term
Lj0g3v0021199.1
n.a. PREDICTED: peptide transporter PTR5-like isoform X1 [Cicer arietinum] gi|502129218|ref|XP_004500227.1| chr0 8607133 8608166 +
2 domain predictions
1 GO term
Lj0g3v0046859.1
n.a. PREDICTED: nitrate transporter 1.2-like [Glycine max] gi|356505723|ref|XP_003521639.1| chr0 15613171 15616780 +
3 domain predictions
1 GO term
Lj0g3v0049289.1
n.a. PREDICTED: polyol transporter 5-like [Cicer arietinum] gi|502138526|ref|XP_004503439.1| chr0 16681882 16682505 -
3 domain predictions
1 GO term
Lj0g3v0061149.1
n.a. LATD/NIP [Medicago truncatula] gi|357436681|ref|XP_003588616.1| chr0 20453363 20457056 -
3 domain predictions
1 GO term
Lj0g3v0064419.1
n.a. PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform 1 [Glycine max] gi|356532044|ref|XP_003534584.1| chr0 22212625 22218080 -
3 domain predictions
1 GO term
Lj0g3v0071849.1
n.a. PREDICTED: SPX domain-containing membrane protein At4g22990-like [Cicer arietinum] gi|502180691|ref|XP_004516695.1| chr0 26454285 26459744 -
2 domain predictions
1 GO term
Lj0g3v0071849.2
n.a. PREDICTED: SPX domain-containing membrane protein At4g22990-like [Cicer arietinum] gi|502180691|ref|XP_004516695.1| chr0 26454285 26462715 -
3 domain predictions
1 GO term
Lj0g3v0071849.3
n.a. PREDICTED: SPX domain-containing membrane protein At4g22990-like [Cicer arietinum] gi|502180691|ref|XP_004516695.1| chr0 26454285 26462715 -
3 domain predictions
1 GO term
Lj0g3v0075859.1
n.a. PREDICTED: probable anion transporter 4, chloroplastic-like [Glycine max] gi|356553048|ref|XP_003544870.1| chr0 28864884 28867180 +
2 domain predictions
1 GO term
Lj0g3v0080199.1
n.a. nodule-specific protein Nlj70 [Lotus japonicus] gi|3329366|gb|AAC39500.1| chr0 31095989 31098233 -
3 domain predictions
1 GO term
Lj0g3v0080209.1
n.a. nodule-specific protein Nlj70 [Lotus japonicus] gi|3329366|gb|AAC39500.1| chr0 31096222 31098233 -
2 domain predictions
1 GO term
Lj0g3v0083849.1
n.a. Nodule-specific protein Nlj70 [Medicago truncatula] gi|357439945|ref|XP_003590250.1| chr0 33352473 33354381 +
2 domain predictions
1 GO term
Lj0g3v0090239.1
n.a. phosphate transporter 5 [Astragalus sinicus] gi|407911912|gb|AFU50504.1| chr0 37124025 37125593 +
4 domain predictions
1 GO term
Lj0g3v0092339.1
n.a. PREDICTED: probable folate-biopterin transporter 2-like isoform X2 [Cicer arietinum] gi|502125088|ref|XP_004498793.1| chr0 38408960 38411993 +
2 domain predictions
1 GO term
Lj0g3v0092339.2
n.a. PREDICTED: probable folate-biopterin transporter 2-like isoform X2 [Cicer arietinum] gi|502125088|ref|XP_004498793.1| chr0 38408960 38411993 +
2 domain predictions
1 GO term
Lj0g3v0092339.3
n.a. PREDICTED: probable folate-biopterin transporter 2-like isoform X2 [Cicer arietinum] gi|502125088|ref|XP_004498793.1| chr0 38408975 38411993 +
2 domain predictions
1 GO term
Lj0g3v0099189.1
n.a. PREDICTED: peptide transporter PTR1-like isoform X1 [Cicer arietinum] gi|502131373|ref|XP_004500964.1| chr0 42022209 42025981 -
3 domain predictions
1 GO term
Lj0g3v0100509.1
n.a. PREDICTED: probable anion transporter 3, chloroplastic-like [Glycine max] gi|356520987|ref|XP_003529140.1| chr0 42481774 42485758 -
4 domain predictions
1 GO term
Lj0g3v0101259.1
n.a. Solute carrier family 22 member 15-like protein [Medicago truncatula] gi|357452551|ref|XP_003596552.1| chr0 42924217 42925692 -
4 domain predictions
1 GO term
Lj0g3v0102079.1
n.a. Solute carrier family 22 member [Medicago truncatula] gi|357515127|ref|XP_003627852.1| chr0 43358041 43359811 +
4 domain predictions
1 GO term
Lj0g3v0102219.1
n.a. Sodium-dependent phosphate transport protein [Medicago truncatula] gi|358346124|ref|XP_003637121.1| chr0 43436317 43444903 +
4 domain predictions
1 GO term
Lj0g3v0111829.1
n.a. PREDICTED: nitrate transporter 1.1-like [Cicer arietinum] gi|502181584|ref|XP_004516839.1| chr0 48584037 48584681 -
2 domain predictions
1 GO term
Lj0g3v0114899.1
n.a. PREDICTED: protein spinster-like [Glycine max] gi|356552876|ref|XP_003544788.1| chr0 50427402 50431221 -
4 domain predictions
1 GO term
Lj0g3v0115359.1
n.a. PREDICTED: sucrose transport protein SUC5-like [Cicer arietinum] gi|502171967|ref|XP_004515134.1| chr0 50711260 50716258 +
2 domain predictions
1 GO term
Lj0g3v0116259.1
n.a. PREDICTED: probable peptide/nitrate transporter At3g53960-like [Glycine max] gi|356496092|ref|XP_003516904.1| chr0 51115184 51121401 -
3 domain predictions
1 GO term
Lj0g3v0123689.1
n.a. nodule-specific protein Nlj70 [Lotus japonicus] gi|3329366|gb|AAC39500.1| chr0 55485927 55488101 -
3 domain predictions
1 GO term
Lj0g3v0126489.1
n.a. Equilibrative nucleoside transporter [Medicago truncatula] gi|357453613|ref|XP_003597087.1| chr0 56901730 56904749 +
2 domain predictions
1 GO term
Lj0g3v0132319.1
n.a. PREDICTED: sugar transport protein 10-like [Glycine max] gi|356530254|ref|XP_003533697.1| chr0 60385794 60387684 +
4 domain predictions
1 GO term
Lj0g3v0146919.1
n.a. PREDICTED: probable inositol transporter 2-like isoform X1 [Cicer arietinum] gi|502086644|ref|XP_004488281.1| chr0 67768036 67771987 +
3 domain predictions
1 GO term
Lj0g3v0146949.1
n.a. PREDICTED: probable inositol transporter 2-like isoform X2 [Cicer arietinum] gi|502086647|ref|XP_004488282.1| chr0 67771934 67773264 +
4 domain predictions
1 GO term
Lj0g3v0146959.1
n.a. PREDICTED: probable inositol transporter 2-like [Glycine max] gi|356530549|ref|XP_003533843.1| chr0 67773258 67774551 +
4 domain predictions
1 GO term
Lj0g3v0153219.1
n.a. PREDICTED: sugar transport protein 10-like, partial [Cicer arietinum] gi|502171509|ref|XP_004515049.1| chr0 71527738 71530288 +
4 domain predictions
1 GO term
Lj0g3v0157609.1
n.a. Major facilitator superfamily protein [Theobroma cacao] gi|508716058|gb|EOY07955.1| chr0 73879900 73881747 +
3 domain predictions
1 GO term
Lj0g3v0162149.1
n.a. PREDICTED: probable inorganic phosphate transporter 1-7-like [Glycine max] gi|356505011|ref|XP_003521286.1| chr0 76441845 76443275 -
3 domain predictions
1 GO term
Lj0g3v0163319.1
n.a. PREDICTED: sugar transporter ERD6-like 7-like [Cicer arietinum] gi|502109384|ref|XP_004493632.1| chr0 77230600 77235996 +
4 domain predictions
1 GO term
Lj0g3v0163319.2
n.a. PREDICTED: sugar transporter ERD6-like 7-like [Glycine max] gi|356504884|ref|XP_003521224.1| chr0 77230600 77235367 +
4 domain predictions
1 GO term
Lj0g3v0163319.3
n.a. PREDICTED: sugar transporter ERD6-like 7-like [Cicer arietinum] gi|502109384|ref|XP_004493632.1| chr0 77230600 77235996 +
4 domain predictions
1 GO term
Lj0g3v0168319.1
n.a. UNC93-like protein C922.05c [Medicago truncatula] gi|357464297|ref|XP_003602430.1| chr0 80218835 80220963 -
3 domain predictions
1 GO term
Lj0g3v0170009.1
n.a. Peptide transporter PTR3-A [Medicago truncatula] gi|357455419|ref|XP_003597990.1| chr0 81370499 81373582 -
2 domain predictions
1 GO term
Lj0g3v0170199.1
n.a. PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Glycine max] gi|356517722|ref|XP_003527535.1| chr0 81485115 81486140 +
3 domain predictions
1 GO term
Lj0g3v0170209.1
n.a. n.a. chr0 81485115 81486140 +
3 domain predictions
1 GO term
Lj0g3v0170219.1
n.a. PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Cicer arietinum] gi|502180015|ref|XP_004516549.1| chr0 81486233 81489774 +
3 domain predictions
1 GO term
Lj0g3v0186199.1
n.a. PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic-like, partial [Cucumis sativus] gi|449468057|ref|XP_004151738.1| chr0 90715492 90718184 -
2 domain predictions
1 GO term
Lj0g3v0187819.1
n.a. PREDICTED: probable folate-biopterin transporter 2-like isoform X1 [Cicer arietinum] gi|502125085|ref|XP_004498792.1| chr0 91642711 91644428 -
2 domain predictions
1 GO term
Lj0g3v0191909.1
n.a. PREDICTED: hexuronate transporter-like [Cicer arietinum] gi|502140119|ref|XP_004504065.1| chr0 93782465 93785551 +
4 domain predictions
1 GO term